RNA–Protein interactions for RNA: ENST00000492391.1

RP9-204, Transcript of RP9, pre-mRNA splicing factor, humanhuman

TSL 3

Gene RP9, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP9-204ENST00000492391 KIF1AQ12756 1690 aa12.2□□□□□ -0.46
RP9-204ENST00000492391 LRP6O75581 1613 aa12.2□□□□□ -0.46
RP9-204ENST00000492391 XPCQ01831 940 aaPredicted RBP12.2□□□□□ -0.46
RP9-204ENST00000492391 ITSN1Q15811 1721 aa12.2□□□□□ -0.46
RP9-204ENST00000492391 ANKARQ7Z5J8 1434 aa12.2□□□□□ -0.46
RP9-204ENST00000492391 MED1Q15648 1581 aaPredicted RBP12.19□□□□□ -0.46
RP9-204ENST00000492391 NUDT16Q96DE0 195 aaKnown RBP12.19□□□□□ -0.46
RP9-204ENST00000492391 CARD11Q9BXL7 1154 aa12.19□□□□□ -0.46
RP9-204ENST00000492391 PMFBP1Q8TBY8 1022 aa12.18□□□□□ -0.46
RP9-204ENST00000492391 CABP2Q9NPB3 220 aa12.18□□□□□ -0.46
RP9-204ENST00000492391 RGS17Q9UGC6 210 aaPredicted RBP12.18□□□□□ -0.46
RP9-204ENST00000492391 PHF8Q9UPP1 1060 aa12.18□□□□□ -0.46
RP9-204ENST00000492391 ALS2Q96Q42 1657 aa12.18□□□□□ -0.46
RP9-204ENST00000492391 COL22A1Q8NFW1 1626 aaPredicted RBP12.18□□□□□ -0.46
RP9-204ENST00000492391 CRYBG1Q9Y4K1 1723 aa12.17□□□□□ -0.46
RP9-204ENST00000492391 PNPLA6Q8IY17 1366 aa12.17□□□□□ -0.46
RP9-204ENST00000492391 AKAP12Q02952 1782 aa12.16□□□□□ -0.46
RP9-204ENST00000492391 ST20-MTHFSA0A0A6YYL1 179 aa12.16□□□□□ -0.46
RP9-204ENST00000492391 JCADQ9P266 1359 aa12.16□□□□□ -0.46
RP9-204ENST00000492391 SBNO2Q9Y2G9 1366 aa12.16□□□□□ -0.46
RP9-204ENST00000492391 ABCA3Q99758 1704 aa12.15□□□□□ -0.46
RP9-204ENST00000492391 MARF1Q9Y4F3 1742 aaKnown RBP12.15□□□□□ -0.46
RP9-204ENST00000492391 PLEKHG3A1L390 1219 aa12.15□□□□□ -0.46
RP9-204ENST00000492391 HAP1P54257 671 aaPredicted RBP12.15□□□□□ -0.46
RP9-204ENST00000492391 KRT28Q7Z3Y7 464 aa12.14□□□□□ -0.47
RP9-204ENST00000492391 SPDYE1Q8NFV5 336 aaPredicted RBP12.14□□□□□ -0.47
RP9-204ENST00000492391 CLEC11AQ9Y240 323 aa12.14□□□□□ -0.47
RP9-204ENST00000492391 POLR3AO14802 1390 aaPredicted RBP12.14□□□□□ -0.47
RP9-204ENST00000492391 CD163L1Q9NR16 1453 aa12.14□□□□□ -0.47
RP9-204ENST00000492391 SPATA31A3Q5VYP0 1347 aa12.13□□□□□ -0.47
RP9-204ENST00000492391 LRRC59Q96AG4 307 aaKnown RBP12.13□□□□□ -0.47
RP9-204ENST00000492391 CCDC61Q9Y6R9 512 aa12.13□□□□□ -0.47
RP9-204ENST00000492391 USP47Q96K76 1375 aa12.13□□□□□ -0.47
RP9-204ENST00000492391 NPHP3Q7Z494 1330 aa12.12□□□□□ -0.47
RP9-204ENST00000492391 SSH2Q76I76 1423 aa12.12□□□□□ -0.47
RP9-204ENST00000492391 ZNF692Q9BU19 519 aaPredicted RBP12.12□□□□□ -0.47
RP9-204ENST00000492391 DISP3Q9P2K9 1392 aa12.12□□□□□ -0.47
RP9-204ENST00000492391 ACEP12821 1306 aa12.11□□□□□ -0.47
RP9-204ENST00000492391 CABP1Q9NZU7 370 aa12.11□□□□□ -0.47
RP9-204ENST00000492391 PPIP5K1Q6PFW1 1433 aa12.11□□□□□ -0.47
RP9-204ENST00000492391 ILDR2Q71H61 639 aa12.1□□□□□ -0.47
RP9-204ENST00000492391 MON2Q7Z3U7 1717 aa12.1□□□□□ -0.47
RP9-204ENST00000492391 CPSF1Q10570 1443 aaKnown RBP12.1□□□□□ -0.47
RP9-204ENST00000492391 EVC2Q86UK5 1308 aa12.1□□□□□ -0.47
RP9-204ENST00000492391 MYOM1P52179 1685 aa12.1□□□□□ -0.47
RP9-204ENST00000492391 NRKQ7Z2Y5 1582 aa12.09□□□□□ -0.47
RP9-204ENST00000492391 SBNO1A3KN83 1393 aa12.09□□□□□ -0.47
RP9-204ENST00000492391 EIF3AQ14152 1382 aaKnown RBP12.09□□□□□ -0.47
RP9-204ENST00000492391 C11orf95C9JLR9 678 aaPredicted RBP12.09□□□□□ -0.47
RP9-204ENST00000492391 SRPK2P78362 688 aaKnown RBP12.09□□□□□ -0.47
RP9-204ENST00000492391 CABLES1Q8TDN4 633 aa12.09□□□□□ -0.47
RP9-204ENST00000492391 SPATA31A6Q5VVP1 1343 aa12.09□□□□□ -0.47
RP9-204ENST00000492391 PIK3C2AO00443 1686 aa12.08□□□□□ -0.48
RP9-204ENST00000492391 PSME1Q06323 249 aa12.08□□□□□ -0.48
RP9-204ENST00000492391 SLC12A5Q9H2X9 1139 aa12.08□□□□□ -0.48
RP9-204ENST00000492391 TNS3Q68CZ2 1445 aa12.08□□□□□ -0.48
RP9-204ENST00000492391 NUTM2BA6NNL0 878 aaPredicted RBP12.07□□□□□ -0.48
RP9-204ENST00000492391 NUTM2EB1AL46 878 aaPredicted RBP12.07□□□□□ -0.48
RP9-204ENST00000492391 PRKAR2AP13861 404 aaKnown RBP12.07□□□□□ -0.48
RP9-204ENST00000492391 NUTM2AQ8IVF1 878 aaPredicted RBP12.07□□□□□ -0.48
RP9-204ENST00000492391 SSUH2Q9Y2M2 353 aa12.07□□□□□ -0.48
RP9-204ENST00000492391 HSPA5P11021 654 aaKnown RBP12.06□□□□□ -0.48
RP9-204ENST00000492391 POTEAQ6S8J7 498 aa12.06□□□□□ -0.48
RP9-204ENST00000492391 NGDNQ8NEJ9 315 aaKnown RBP12.06□□□□□ -0.48
RP9-204ENST00000492391 PHRF1Q9P1Y6 1649 aaKnown RBP12.06□□□□□ -0.48
RP9-204ENST00000492391 USP6P35125 1406 aa12.05□□□□□ -0.48
RP9-204ENST00000492391 VSIG10Q8N0Z9 540 aa12.05□□□□□ -0.48
RP9-204ENST00000492391 PUS7Q96PZ0 661 aaKnown RBP12.05□□□□□ -0.48
RP9-204ENST00000492391 EP400Q96L91 3159 aa12.04□□□□□ -0.48
RP9-204ENST00000492391 RGPD5Q99666 1765 aa12.03□□□□□ -0.48
RP9-204ENST00000492391 ADAMTS2O95450 1211 aa12.03□□□□□ -0.48
RP9-204ENST00000492391 NUTM2GQ5VZR2 741 aa12.03□□□□□ -0.48
RP9-204ENST00000492391 ZRANB1Q9UGI0 708 aa12.03□□□□□ -0.48
RP9-204ENST00000492391 USP54Q70EL1 1684 aa12.03□□□□□ -0.48
RP9-204ENST00000492391 COL18A1P39060 1754 aa12.02□□□□□ -0.48
RP9-204ENST00000492391 BCL9LQ86UU0 1499 aa12.02□□□□□ -0.48
RP9-204ENST00000492391 PLCH1Q4KWH8 1693 aa12.02□□□□□ -0.49
RP9-204ENST00000492391 ATAD2Q6PL18 1390 aa12.02□□□□□ -0.49
RP9-204ENST00000492391 CARD14Q9BXL6 1004 aa12.01□□□□□ -0.49
RP9-204ENST00000492391 TTC21BQ7Z4L5 1316 aa12.01□□□□□ -0.49
RP9-204ENST00000492391 A0A1W2PP64 1363 aa12.01□□□□□ -0.49
RP9-204ENST00000492391 NRAPQ86VF7 1730 aa12□□□□□ -0.49
RP9-204ENST00000492391 FAM83GA6ND36 823 aa12□□□□□ -0.49
RP9-204ENST00000492391 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
RP9-204ENST00000492391 PLEKHG5O94827 1062 aa12□□□□□ -0.49
RP9-204ENST00000492391 FNBP4Q8N3X1 1017 aaPredicted RBP12□□□□□ -0.49
RP9-204ENST00000492391 USP19O94966 1318 aa12□□□□□ -0.49
RP9-204ENST00000492391 ARHGEF10O15013 1369 aa12□□□□□ -0.49
RP9-204ENST00000492391 SLIT2O94813 1529 aa12□□□□□ -0.49
RP9-204ENST00000492391 EIF4G2P78344 907 aaKnown RBP eCLIP11.99□□□□□ -0.49
RP9-204ENST00000492391 LMOD2Q6P5Q4 547 aa11.99□□□□□ -0.49
RP9-204ENST00000492391 AFF2P51816 1311 aa11.99□□□□□ -0.49
RP9-204ENST00000492391 SLIT3O75094 1523 aa11.99□□□□□ -0.49
RP9-204ENST00000492391 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.99□□□□□ -0.49
RP9-204ENST00000492391 NWD2Q9ULI1 1742 aa11.99□□□□□ -0.49
RP9-204ENST00000492391 LMO7Q8WWI1 1683 aa11.98□□□□□ -0.49
RP9-204ENST00000492391 KTN1Q86UP2 1357 aaKnown RBP11.98□□□□□ -0.49
RP9-204ENST00000492391 EVX2Q03828 476 aa11.98□□□□□ -0.49
RP9-204ENST00000492391 SPOCK2Q92563 424 aa11.98□□□□□ -0.49
RP9-204ENST00000492391 C8orf37Q96NL8 207 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms