RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 U2SURPO15042 1029 aaKnown RBP20.64■□□□□ 0.89
SEMA4D-220ENST00000492386 ZKSCAN2Q63HK3 967 aa20.64■□□□□ 0.89
SEMA4D-220ENST00000492386 PDZRN3Q9UPQ7 1066 aa20.64■□□□□ 0.89
SEMA4D-220ENST00000492386 RWDD1Q9H446 243 aaPredicted RBP20.63■□□□□ 0.89
SEMA4D-220ENST00000492386 TERF2IPQ9NYB0 399 aa20.63■□□□□ 0.89
SEMA4D-220ENST00000492386 ALKQ9UM73 1620 aa20.62■□□□□ 0.89
SEMA4D-220ENST00000492386 KIF20BQ96Q89 1820 aa20.61■□□□□ 0.89
SEMA4D-220ENST00000492386 EXOSC9Q06265 439 aaKnown RBP20.61■□□□□ 0.89
SEMA4D-220ENST00000492386 DZIP1LQ8IYY4 767 aaKnown RBP20.61■□□□□ 0.89
SEMA4D-220ENST00000492386 GSE1Q14687 1217 aa20.6■□□□□ 0.89
SEMA4D-220ENST00000492386 POGKQ9P215 609 aa20.6■□□□□ 0.89
SEMA4D-220ENST00000492386 ARHGEF40Q8TER5 1519 aa20.6■□□□□ 0.89
SEMA4D-220ENST00000492386 PNPLA6Q8IY17 1366 aa20.59■□□□□ 0.89
SEMA4D-220ENST00000492386 IL16Q14005 1332 aa20.59■□□□□ 0.89
SEMA4D-220ENST00000492386 FTSJ3Q8IY81 847 aaKnown RBP20.58■□□□□ 0.89
SEMA4D-220ENST00000492386 FBXO31Q5XUX0 539 aaPredicted RBP20.58■□□□□ 0.88
SEMA4D-220ENST00000492386 SMC4Q9NTJ3 1288 aa20.58■□□□□ 0.88
SEMA4D-220ENST00000492386 SSH1Q8WYL5 1049 aa20.57■□□□□ 0.88
SEMA4D-220ENST00000492386 FRAT2O75474 233 aaPredicted RBP20.57■□□□□ 0.88
SEMA4D-220ENST00000492386 TRIM27P14373 513 aa20.57■□□□□ 0.88
SEMA4D-220ENST00000492386 CDK19Q9BWU1 502 aa20.56■□□□□ 0.88
SEMA4D-220ENST00000492386 CDC42BPGQ6DT37 1551 aa20.56■□□□□ 0.88
SEMA4D-220ENST00000492386 DIAPH1O60610 1272 aaKnown RBP20.55■□□□□ 0.88
SEMA4D-220ENST00000492386 HDGFL2Q7Z4V5 671 aaPredicted RBP20.55■□□□□ 0.88
SEMA4D-220ENST00000492386 RIPK4P57078 832 aa20.54■□□□□ 0.88
SEMA4D-220ENST00000492386 TBC1D32Q96NH3 1257 aa20.53■□□□□ 0.88
SEMA4D-220ENST00000492386 CABP1Q9NZU7 370 aa20.53■□□□□ 0.88
SEMA4D-220ENST00000492386 BECN1Q14457 450 aa20.53■□□□□ 0.88
SEMA4D-220ENST00000492386 ATF7IPQ6VMQ6 1270 aa20.53■□□□□ 0.88
SEMA4D-220ENST00000492386 LRRC7Q96NW7 1537 aa20.53■□□□□ 0.88
SEMA4D-220ENST00000492386 HDAC1Q13547 482 aaPredicted RBP20.52■□□□□ 0.88
SEMA4D-220ENST00000492386 IL27Q8NEV9 243 aa20.52■□□□□ 0.88
SEMA4D-220ENST00000492386 NOB1Q9ULX3 412 aaKnown RBP20.51■□□□□ 0.87
SEMA4D-220ENST00000492386 DDX19BQ9UMR2 479 aa20.51■□□□□ 0.87
SEMA4D-220ENST00000492386 DLC1Q96QB1 1528 aa20.51■□□□□ 0.87
SEMA4D-220ENST00000492386 PNNQ9H307 717 aaKnown RBP20.51■□□□□ 0.87
SEMA4D-220ENST00000492386 UPF2Q9HAU5 1272 aaKnown RBP20.51■□□□□ 0.87
SEMA4D-220ENST00000492386 SETD1AO15047 1707 aaKnown RBP20.51■□□□□ 0.87
SEMA4D-220ENST00000492386 ITPRIPQ8IWB1 547 aa20.5■□□□□ 0.87
SEMA4D-220ENST00000492386 ATP7BP35670 1465 aa20.49■□□□□ 0.87
SEMA4D-220ENST00000492386 FCHSD2O94868 740 aa20.49■□□□□ 0.87
SEMA4D-220ENST00000492386 FAM135BQ49AJ0 1406 aa20.48■□□□□ 0.87
SEMA4D-220ENST00000492386 RIMBP3CA6NJZ7 1639 aa20.48■□□□□ 0.87
SEMA4D-220ENST00000492386 RIMBP3BA6NNM3 1639 aa20.48■□□□□ 0.87
SEMA4D-220ENST00000492386 RIMBP3Q9UFD9 1639 aa20.48■□□□□ 0.87
SEMA4D-220ENST00000492386 TMEM57Q8N5G2 664 aa20.48■□□□□ 0.87
SEMA4D-220ENST00000492386 MAP2P11137 1827 aaKnown RBP20.47■□□□□ 0.87
SEMA4D-220ENST00000492386 RSPH6AQ9H0K4 717 aa20.47■□□□□ 0.87
SEMA4D-220ENST00000492386 A2ML1A8K2U0 1454 aa20.47■□□□□ 0.87
SEMA4D-220ENST00000492386 KIF16BQ96L93 1317 aa20.47■□□□□ 0.87
SEMA4D-220ENST00000492386 POLKQ9UBT6 870 aa20.46■□□□□ 0.87
SEMA4D-220ENST00000492386 STAG3Q9UJ98 1225 aa20.46■□□□□ 0.87
SEMA4D-220ENST00000492386 REREQ9P2R6 1566 aa20.46■□□□□ 0.87
SEMA4D-220ENST00000492386 ANTXR1Q9H6X2 564 aa20.46■□□□□ 0.87
SEMA4D-220ENST00000492386 ZBTB40Q9NUA8 1239 aa20.46■□□□□ 0.87
SEMA4D-220ENST00000492386 SMC5Q8IY18 1101 aa20.45■□□□□ 0.86
SEMA4D-220ENST00000492386 ALDH1L2Q3SY69 923 aa20.45■□□□□ 0.86
SEMA4D-220ENST00000492386 WAPLQ7Z5K2 1190 aa20.45■□□□□ 0.86
SEMA4D-220ENST00000492386 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.45■□□□□ 0.86
SEMA4D-220ENST00000492386 FBLN1P23142 703 aa20.44■□□□□ 0.86
SEMA4D-220ENST00000492386 PRKAR2BP31323 418 aa20.44■□□□□ 0.86
SEMA4D-220ENST00000492386 AGLP35573 1532 aa20.44■□□□□ 0.86
SEMA4D-220ENST00000492386 SPATA31D1Q6ZQQ2 1576 aa20.44■□□□□ 0.86
SEMA4D-220ENST00000492386 PPIP5K1Q6PFW1 1433 aa20.44■□□□□ 0.86
SEMA4D-220ENST00000492386 IPO8O15397 1037 aaKnown RBP20.44■□□□□ 0.86
SEMA4D-220ENST00000492386 TBC1D2Q9BYX2 928 aa20.44■□□□□ 0.86
SEMA4D-220ENST00000492386 SLKQ9H2G2 1235 aaPredicted RBP20.44■□□□□ 0.86
SEMA4D-220ENST00000492386 RIMS2Q9UQ26 1411 aa20.42■□□□□ 0.86
SEMA4D-220ENST00000492386 BRPF1P55201 1214 aaPredicted RBP20.41■□□□□ 0.86
SEMA4D-220ENST00000492386 PHACTR3Q96KR7 559 aa20.41■□□□□ 0.86
SEMA4D-220ENST00000492386 BRPF3Q9ULD4 1205 aa20.41■□□□□ 0.86
SEMA4D-220ENST00000492386 PPP6R1Q9UPN7 881 aa20.41■□□□□ 0.86
SEMA4D-220ENST00000492386 CPSF1Q10570 1443 aaKnown RBP20.4■□□□□ 0.86
SEMA4D-220ENST00000492386 NRXN3Q9Y4C0 1643 aa20.4■□□□□ 0.86
SEMA4D-220ENST00000492386 DIP2BQ9P265 1576 aa20.4■□□□□ 0.86
SEMA4D-220ENST00000492386 NFE2L2Q16236 605 aa20.39■□□□□ 0.85
SEMA4D-220ENST00000492386 ZNF428Q96B54 188 aa20.39■□□□□ 0.85
SEMA4D-220ENST00000492386 TSPOAP1O95153 1857 aa20.38■□□□□ 0.85
SEMA4D-220ENST00000492386 EDC4Q6P2E9 1401 aaKnown RBP20.38■□□□□ 0.85
SEMA4D-220ENST00000492386 C22orf23Q9BZE7 217 aa20.38■□□□□ 0.85
SEMA4D-220ENST00000492386 HMOX1P09601 288 aa20.37■□□□□ 0.85
SEMA4D-220ENST00000492386 CDK12Q9NYV4 1490 aaPredicted RBP20.37■□□□□ 0.85
SEMA4D-220ENST00000492386 EMILIN1Q9Y6C2 1016 aa20.37■□□□□ 0.85
SEMA4D-220ENST00000492386 IL13P35225 146 aa20.36■□□□□ 0.85
SEMA4D-220ENST00000492386 MFAP1P55081 439 aaKnown RBP20.36■□□□□ 0.85
SEMA4D-220ENST00000492386 NUCB1Q02818 461 aa20.36■□□□□ 0.85
SEMA4D-220ENST00000492386 FAM69CQ0P6D2 419 aa20.36■□□□□ 0.85
SEMA4D-220ENST00000492386 CYB5RLQ6IPT4 315 aa20.36■□□□□ 0.85
SEMA4D-220ENST00000492386 THUMPD2Q9BTF0 503 aaKnown RBP20.36■□□□□ 0.85
SEMA4D-220ENST00000492386 DLG5Q8TDM6 1919 aa20.36■□□□□ 0.85
SEMA4D-220ENST00000492386 VAMP4O75379 141 aa20.35■□□□□ 0.85
SEMA4D-220ENST00000492386 MON2Q7Z3U7 1717 aa20.35■□□□□ 0.85
SEMA4D-220ENST00000492386 WASLO00401 505 aaPredicted RBP20.35■□□□□ 0.85
SEMA4D-220ENST00000492386 NME9Q86XW9 330 aa20.35■□□□□ 0.85
SEMA4D-220ENST00000492386 PIK3R4Q99570 1358 aa20.35■□□□□ 0.85
SEMA4D-220ENST00000492386 PTCH1Q13635 1447 aa20.34■□□□□ 0.85
SEMA4D-220ENST00000492386 MRPL50Q8N5N7 158 aaKnown RBP20.34■□□□□ 0.85
SEMA4D-220ENST00000492386 RTN4Q9NQC3 1192 aaKnown RBP20.34■□□□□ 0.85
SEMA4D-220ENST00000492386 AATKQ6ZMQ8 1374 aa20.34■□□□□ 0.85
SEMA4D-220ENST00000492386 ZNF853P0CG23 659 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms