RNA–Protein interactions for RNA: ENST00000492142.5

TRO-223, Transcript of trophinin, human

TSL 3

Gene TRO, Length 485 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRO-223	ENST00000492142	XPC	Q01831	940 aa	Predicted RBP	13.35	□□□□□ -0.27
TRO-223	ENST00000492142	BRINP3	Q76B58	766 aa		13.35	□□□□□ -0.27
TRO-223	ENST00000492142	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
TRO-223	ENST00000492142	DDX17	Q92841	729 aa	Known RBP	13.35	□□□□□ -0.27
TRO-223	ENST00000492142	CPSF1	Q10570	1443 aa	Known RBP	13.35	□□□□□ -0.27
TRO-223	ENST00000492142	NSD3	Q9BZ95	1437 aa		13.34	□□□□□ -0.27
TRO-223	ENST00000492142	PIP4K2B	P78356	416 aa		13.34	□□□□□ -0.27
TRO-223	ENST00000492142	POLR3A	O14802	1390 aa	Predicted RBP	13.33	□□□□□ -0.27
TRO-223	ENST00000492142	KRT28	Q7Z3Y7	464 aa		13.33	□□□□□ -0.28
TRO-223	ENST00000492142	PAK3	O75914	559 aa	Predicted RBP	13.32	□□□□□ -0.28
TRO-223	ENST00000492142	CC2D1B	Q5T0F9	858 aa	Known RBP	13.32	□□□□□ -0.28
TRO-223	ENST00000492142	AKAP12	Q02952	1782 aa		13.32	□□□□□ -0.28
TRO-223	ENST00000492142	USP6	P35125	1406 aa		13.31	□□□□□ -0.28
TRO-223	ENST00000492142	IQSEC2	Q5JU85	1478 aa		13.31	□□□□□ -0.28
TRO-223	ENST00000492142	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.31	□□□□□ -0.28
TRO-223	ENST00000492142	TTC21B	Q7Z4L5	1316 aa		13.31	□□□□□ -0.28
TRO-223	ENST00000492142	NME9	Q86XW9	330 aa		13.3	□□□□□ -0.28
TRO-223	ENST00000492142	GGNBP2	Q9H3C7	697 aa		13.3	□□□□□ -0.28
TRO-223	ENST00000492142	ZRANB1	Q9UGI0	708 aa		13.3	□□□□□ -0.28
TRO-223	ENST00000492142	CGNL1	Q0VF96	1302 aa		13.3	□□□□□ -0.28
TRO-223	ENST00000492142	NPHP3	Q7Z494	1330 aa		13.3	□□□□□ -0.28
TRO-223	ENST00000492142	KIF1A	Q12756	1690 aa		13.3	□□□□□ -0.28
TRO-223	ENST00000492142	EDC4	Q6P2E9	1401 aa	Known RBP	13.3	□□□□□ -0.28
TRO-223	ENST00000492142	FYB1	O15117	783 aa		13.29	□□□□□ -0.28
TRO-223	ENST00000492142	ANP32C	O43423	234 aa		13.29	□□□□□ -0.28
TRO-223	ENST00000492142	LMOD2	Q6P5Q4	547 aa		13.29	□□□□□ -0.28
TRO-223	ENST00000492142	MON2	Q7Z3U7	1717 aa		13.28	□□□□□ -0.28
TRO-223	ENST00000492142	NUTM2G	Q5VZR2	741 aa		13.28	□□□□□ -0.28
TRO-223	ENST00000492142	SSH2	Q76I76	1423 aa		13.28	□□□□□ -0.28
TRO-223	ENST00000492142	PLEKHG5	O94827	1062 aa		13.27	□□□□□ -0.29
TRO-223	ENST00000492142	MORC1	Q86VD1	984 aa		13.27	□□□□□ -0.29
TRO-223	ENST00000492142	ABTB2	Q8N961	1025 aa		13.27	□□□□□ -0.29
TRO-223	ENST00000492142	TTC21A	Q8NDW8	1320 aa		13.27	□□□□□ -0.29
TRO-223	ENST00000492142	ROBO1	Q9Y6N7	1651 aa		13.27	□□□□□ -0.29
TRO-223	ENST00000492142	CAPN15	O75808	1086 aa		13.26	□□□□□ -0.29
TRO-223	ENST00000492142	BRD4	O60885	1362 aa	Predicted RBP	13.25	□□□□□ -0.29
TRO-223	ENST00000492142	SOS2	Q07890	1332 aa	Predicted RBP	13.25	□□□□□ -0.29
TRO-223	ENST00000492142	TNNT2	P45379	298 aa	Predicted RBP	13.25	□□□□□ -0.29
TRO-223	ENST00000492142	NLRP6	P59044	892 aa		13.25	□□□□□ -0.29
TRO-223	ENST00000492142	MIER1	Q8N108	512 aa		13.25	□□□□□ -0.29
TRO-223	ENST00000492142	COG3	Q96JB2	828 aa		13.25	□□□□□ -0.29
TRO-223	ENST00000492142	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.25	□□□□□ -0.29
TRO-223	ENST00000492142	NPC1L1	Q9UHC9	1359 aa		13.24	□□□□□ -0.29
TRO-223	ENST00000492142	RALBP1	Q15311	655 aa		13.24	□□□□□ -0.29
TRO-223	ENST00000492142	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.24	□□□□□ -0.29
TRO-223	ENST00000492142	PXDN	Q92626	1479 aa		13.23	□□□□□ -0.29
TRO-223	ENST00000492142	SBNO1	A3KN83	1393 aa		13.23	□□□□□ -0.29
TRO-223	ENST00000492142	SPATA31A3	Q5VYP0	1347 aa		13.23	□□□□□ -0.29
TRO-223	ENST00000492142	NRK	Q7Z2Y5	1582 aa		13.23	□□□□□ -0.29
TRO-223	ENST00000492142	KIF20B	Q96Q89	1820 aa		13.23	□□□□□ -0.29
TRO-223	ENST00000492142	NSD2	O96028	1365 aa		13.22	□□□□□ -0.29
TRO-223	ENST00000492142	NHSL1	Q5SYE7	1610 aa		13.22	□□□□□ -0.29
TRO-223	ENST00000492142	SOX12	O15370	315 aa		13.22	□□□□□ -0.29
TRO-223	ENST00000492142	NLRP13	Q86W25	1043 aa		13.22	□□□□□ -0.29
TRO-223	ENST00000492142	TRPM3	Q9HCF6	1732 aa	Predicted RBP	13.22	□□□□□ -0.29
TRO-223	ENST00000492142	FBLN1	P23142	703 aa		13.21	□□□□□ -0.29
TRO-223	ENST00000492142	LRRC59	Q96AG4	307 aa	Known RBP	13.21	□□□□□ -0.29
TRO-223	ENST00000492142	USP31	Q70CQ4	1352 aa		13.2	□□□□□ -0.3
TRO-223	ENST00000492142	PARD3	Q8TEW0	1356 aa		13.2	□□□□□ -0.3
TRO-223	ENST00000492142	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.2	□□□□□ -0.3
TRO-223	ENST00000492142	PIK3C2A	O00443	1686 aa		13.2	□□□□□ -0.3
TRO-223	ENST00000492142	TNS3	Q68CZ2	1445 aa		13.2	□□□□□ -0.3
TRO-223	ENST00000492142	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.2	□□□□□ -0.3
TRO-223	ENST00000492142	PPP2R1A	P30153	589 aa		13.19	□□□□□ -0.3
TRO-223	ENST00000492142	CABLES1	Q8TDN4	633 aa		13.19	□□□□□ -0.3
TRO-223	ENST00000492142	PHLPP1	O60346	1717 aa		13.19	□□□□□ -0.3
TRO-223	ENST00000492142	ARHGEF10	O15013	1369 aa		13.19	□□□□□ -0.3
TRO-223	ENST00000492142	OVOS2	A0A0J9YW53	1432 aa		13.18	□□□□□ -0.3
TRO-223	ENST00000492142	OVOS2	Q6IE36	1432 aa		13.18	□□□□□ -0.3
TRO-223	ENST00000492142	ALS2	Q96Q42	1657 aa		13.18	□□□□□ -0.3
TRO-223	ENST00000492142	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.17	□□□□□ -0.3
TRO-223	ENST00000492142	ANKRD26	Q9UPS8	1709 aa		13.17	□□□□□ -0.3
TRO-223	ENST00000492142	HSPA1L	P34931	641 aa		13.17	□□□□□ -0.3
TRO-223	ENST00000492142	ZBTB7C	A1YPR0	619 aa		13.16	□□□□□ -0.3
TRO-223	ENST00000492142	PPM1G	O15355	546 aa	Predicted RBP	13.16	□□□□□ -0.3
TRO-223	ENST00000492142	GC	P02774	474 aa		13.16	□□□□□ -0.3
TRO-223	ENST00000492142	MYCN	P04198	464 aa	Predicted RBP	13.16	□□□□□ -0.3
TRO-223	ENST00000492142	RRS1	Q15050	365 aa	Known RBP	13.16	□□□□□ -0.3
TRO-223	ENST00000492142	USP19	O94966	1318 aa		13.15	□□□□□ -0.3
TRO-223	ENST00000492142	MTHFS	P49914	203 aa		13.15	□□□□□ -0.3
TRO-223	ENST00000492142	HAP1	P54257	671 aa	Predicted RBP	13.15	□□□□□ -0.3
TRO-223	ENST00000492142	CCDC184	Q52MB2	194 aa		13.15	□□□□□ -0.3
TRO-223	ENST00000492142	KCNH5	Q8NCM2	988 aa		13.15	□□□□□ -0.3
TRO-223	ENST00000492142	POLK	Q9UBT6	870 aa		13.15	□□□□□ -0.3
TRO-223	ENST00000492142	COL16A1	Q07092	1604 aa	Predicted RBP	13.14	□□□□□ -0.31
TRO-223	ENST00000492142	MARF1	Q9Y4F3	1742 aa	Known RBP	13.14	□□□□□ -0.31
TRO-223	ENST00000492142	ZC3H6	P61129	1189 aa	Known RBP	13.14	□□□□□ -0.31
TRO-223	ENST00000492142	EMILIN1	Q9Y6C2	1016 aa		13.14	□□□□□ -0.31
TRO-223	ENST00000492142	MED1	Q15648	1581 aa	Predicted RBP	13.13	□□□□□ -0.31
TRO-223	ENST00000492142	PNPLA6	Q8IY17	1366 aa		13.13	□□□□□ -0.31
TRO-223	ENST00000492142	MAP2	P11137	1827 aa	Known RBP	13.13	□□□□□ -0.31
TRO-223	ENST00000492142	MAP3K19	Q56UN5	1328 aa		13.13	□□□□□ -0.31
TRO-223	ENST00000492142	USP54	Q70EL1	1684 aa		13.12	□□□□□ -0.31
TRO-223	ENST00000492142	AATK	Q6ZMQ8	1374 aa		13.12	□□□□□ -0.31
TRO-223	ENST00000492142	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.12	□□□□□ -0.31
TRO-223	ENST00000492142	NUTM2E	B1AL46	878 aa	Predicted RBP	13.12	□□□□□ -0.31
TRO-223	ENST00000492142	CCER2	I3L3R5	266 aa		13.12	□□□□□ -0.31
TRO-223	ENST00000492142	AMPH	P49418	695 aa		13.12	□□□□□ -0.31
TRO-223	ENST00000492142	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.12	□□□□□ -0.31
TRO-223	ENST00000492142	MRS2	Q9HD23	443 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms