RNA–Protein interactions for RNA: ENST00000491802.1

CPNE9-204, Transcript of copine family member 9, humanhuman

TSL 4

Gene CPNE9, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-204ENST00000491802 SLC24A1O60721 1099 aa32.7■■■□□ 2.83
CPNE9-204ENST00000491802 PAK3O75914 559 aaPredicted RBP32.69■■■□□ 2.82
CPNE9-204ENST00000491802 FNBP4Q8N3X1 1017 aaPredicted RBP32.69■■■□□ 2.82
CPNE9-204ENST00000491802 PUS7Q96PZ0 661 aaKnown RBP32.69■■■□□ 2.82
CPNE9-204ENST00000491802 NGLY1Q96IV0 654 aa32.67■■■□□ 2.82
CPNE9-204ENST00000491802 AKAP12Q02952 1782 aa32.67■■■□□ 2.82
CPNE9-204ENST00000491802 SOCS7O14512 581 aa32.66■■■□□ 2.82
CPNE9-204ENST00000491802 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.65■■■□□ 2.82
CPNE9-204ENST00000491802 PLEKHG5O94827 1062 aa32.64■■■□□ 2.82
CPNE9-204ENST00000491802 USP6P35125 1406 aa32.64■■■□□ 2.82
CPNE9-204ENST00000491802 SLIT2O94813 1529 aa32.61■■■□□ 2.81
CPNE9-204ENST00000491802 SSH2Q76I76 1423 aa32.61■■■□□ 2.81
CPNE9-204ENST00000491802 TMF1P82094 1093 aa32.61■■■□□ 2.81
CPNE9-204ENST00000491802 CABLES1Q8TDN4 633 aa32.61■■■□□ 2.81
CPNE9-204ENST00000491802 CDK12Q9NYV4 1490 aaPredicted RBP32.61■■■□□ 2.81
CPNE9-204ENST00000491802 NWD2Q9ULI1 1742 aa32.6■■■□□ 2.81
CPNE9-204ENST00000491802 HAP1P54257 671 aaPredicted RBP32.6■■■□□ 2.81
CPNE9-204ENST00000491802 BCL9LQ86UU0 1499 aa32.6■■■□□ 2.81
CPNE9-204ENST00000491802 CPSF1Q10570 1443 aaKnown RBP32.6■■■□□ 2.81
CPNE9-204ENST00000491802 PHRF1Q9P1Y6 1649 aaKnown RBP32.59■■■□□ 2.81
CPNE9-204ENST00000491802 ZNF692Q9BU19 519 aaPredicted RBP32.59■■■□□ 2.81
CPNE9-204ENST00000491802 TMC1Q8TDI8 760 aa32.58■■■□□ 2.81
CPNE9-204ENST00000491802 USP21Q9UK80 565 aa32.58■■■□□ 2.81
CPNE9-204ENST00000491802 MON2Q7Z3U7 1717 aa32.57■■■□□ 2.81
CPNE9-204ENST00000491802 PLCH1Q4KWH8 1693 aa32.57■■■□□ 2.8
CPNE9-204ENST00000491802 NRKQ7Z2Y5 1582 aa32.57■■■□□ 2.8
CPNE9-204ENST00000491802 EIF4G2P78344 907 aaKnown RBP eCLIP32.56■■■□□ 2.8
CPNE9-204ENST00000491802 ATRNO75882 1429 aa32.56■■■□□ 2.8
CPNE9-204ENST00000491802 CD163L1Q9NR16 1453 aa32.54■■■□□ 2.8
CPNE9-204ENST00000491802 RXRBP28702 533 aa32.54■■■□□ 2.8
CPNE9-204ENST00000491802 QTRT2Q9H974 415 aaKnown RBP32.54■■■□□ 2.8
CPNE9-204ENST00000491802 TRPC5Q9UL62 973 aaPredicted RBP32.54■■■□□ 2.8
CPNE9-204ENST00000491802 COL14A1Q05707 1796 aaKnown RBP32.54■■■□□ 2.8
CPNE9-204ENST00000491802 HSPA5P11021 654 aaKnown RBP32.53■■■□□ 2.8
CPNE9-204ENST00000491802 KTN1Q86UP2 1357 aaKnown RBP32.53■■■□□ 2.8
CPNE9-204ENST00000491802 NINLQ9Y2I6 1382 aa32.53■■■□□ 2.8
CPNE9-204ENST00000491802 RBM6P78332 1123 aaKnown RBP32.52■■■□□ 2.8
CPNE9-204ENST00000491802 NUTM2GQ5VZR2 741 aa32.52■■■□□ 2.8
CPNE9-204ENST00000491802 ABTB2Q8N961 1025 aa32.52■■■□□ 2.8
CPNE9-204ENST00000491802 SLC12A5Q9H2X9 1139 aa32.52■■■□□ 2.8
CPNE9-204ENST00000491802 USP19O94966 1318 aa32.51■■■□□ 2.8
CPNE9-204ENST00000491802 PIK3C2AO00443 1686 aa32.5■■■□□ 2.79
CPNE9-204ENST00000491802 CDCA8Q53HL2 280 aa32.49■■■□□ 2.79
CPNE9-204ENST00000491802 A0A1W2PP64 1363 aa32.48■■■□□ 2.79
CPNE9-204ENST00000491802 HDGFL2Q7Z4V5 671 aaPredicted RBP32.48■■■□□ 2.79
CPNE9-204ENST00000491802 UNC5CLQ8IV45 518 aa32.48■■■□□ 2.79
CPNE9-204ENST00000491802 NRAPQ86VF7 1730 aa32.48■■■□□ 2.79
CPNE9-204ENST00000491802 NLRP13Q86W25 1043 aa32.47■■■□□ 2.79
CPNE9-204ENST00000491802 TTC21BQ7Z4L5 1316 aa32.47■■■□□ 2.79
CPNE9-204ENST00000491802 TTC21AQ8NDW8 1320 aa32.47■■■□□ 2.79
CPNE9-204ENST00000491802 FAM83GA6ND36 823 aa32.46■■■□□ 2.79
CPNE9-204ENST00000491802 TERF2IPQ9NYB0 399 aa32.46■■■□□ 2.79
CPNE9-204ENST00000491802 SLIT3O75094 1523 aa32.46■■■□□ 2.79
CPNE9-204ENST00000491802 USP54Q70EL1 1684 aa32.45■■■□□ 2.79
CPNE9-204ENST00000491802 CPDO75976 1380 aa32.43■■■□□ 2.78
CPNE9-204ENST00000491802 EDC4Q6P2E9 1401 aaKnown RBP32.42■■■□□ 2.78
CPNE9-204ENST00000491802 MYOM1P52179 1685 aa32.41■■■□□ 2.78
CPNE9-204ENST00000491802 NLRP6P59044 892 aa32.4■■■□□ 2.78
CPNE9-204ENST00000491802 ANKRD36BQ8N2N9 1353 aa32.4■■■□□ 2.78
CPNE9-204ENST00000491802 KIAA0232Q92628 1395 aa32.4■■■□□ 2.78
CPNE9-204ENST00000491802 RGS12O14924 1447 aa32.4■■■□□ 2.78
CPNE9-204ENST00000491802 GLI3P10071 1580 aa32.38■■■□□ 2.77
CPNE9-204ENST00000491802 VPS72Q15906 364 aa32.38■■■□□ 2.77
CPNE9-204ENST00000491802 SUGP2Q8IX01 1082 aaKnown RBP eCLIP32.38■■■□□ 2.77
CPNE9-204ENST00000491802 GJD4Q96KN9 370 aaPredicted RBP32.38■■■□□ 2.77
CPNE9-204ENST00000491802 PRDM11Q9NQV5 511 aa32.38■■■□□ 2.77
CPNE9-204ENST00000491802 GCP02774 474 aa32.36■■■□□ 2.77
CPNE9-204ENST00000491802 LMO7Q8WWI1 1683 aa32.36■■■□□ 2.77
CPNE9-204ENST00000491802 USP31Q70CQ4 1352 aa32.35■■■□□ 2.77
CPNE9-204ENST00000491802 POLR3GLQ9BT43 218 aa32.34■■■□□ 2.77
CPNE9-204ENST00000491802 BTG4Q9NY30 223 aa32.34■■■□□ 2.77
CPNE9-204ENST00000491802 ZC3H6P61129 1189 aaKnown RBP32.33■■■□□ 2.77
CPNE9-204ENST00000491802 NME9Q86XW9 330 aa32.32■■■□□ 2.76
CPNE9-204ENST00000491802 CHRNA2Q15822 529 aa32.29■■■□□ 2.76
CPNE9-204ENST00000491802 ZRANB1Q9UGI0 708 aa32.29■■■□□ 2.76
CPNE9-204ENST00000491802 KCNH5Q8NCM2 988 aa32.28■■■□□ 2.76
CPNE9-204ENST00000491802 NFAT5O94916 1531 aa32.27■■■□□ 2.76
CPNE9-204ENST00000491802 COL18A1P39060 1754 aa32.27■■■□□ 2.76
CPNE9-204ENST00000491802 CAMTA1Q9Y6Y1 1673 aa32.26■■■□□ 2.75
CPNE9-204ENST00000491802 AATKQ6ZMQ8 1374 aa32.25■■■□□ 2.75
CPNE9-204ENST00000491802 ONECUT3O60422 494 aaPredicted RBP32.25■■■□□ 2.75
CPNE9-204ENST00000491802 ABCC6O95255 1503 aa32.25■■■□□ 2.75
CPNE9-204ENST00000491802 OVOS2A0A0J9YW53 1432 aa32.25■■■□□ 2.75
CPNE9-204ENST00000491802 OVOS2Q6IE36 1432 aa32.25■■■□□ 2.75
CPNE9-204ENST00000491802 SOX12O15370 315 aa32.24■■■□□ 2.75
CPNE9-204ENST00000491802 C11orf95C9JLR9 678 aaPredicted RBP32.23■■■□□ 2.75
CPNE9-204ENST00000491802 SPATA31A5Q5VU36 1347 aa32.22■■■□□ 2.75
CPNE9-204ENST00000491802 SPATA31A7Q8IWB4 1347 aa32.22■■■□□ 2.75
CPNE9-204ENST00000491802 ZBTB7CA1YPR0 619 aa32.21■■■□□ 2.75
CPNE9-204ENST00000491802 NSD3Q9BZ95 1437 aa32.2■■■□□ 2.75
CPNE9-204ENST00000491802 ARHGEF25Q86VW2 580 aa32.19■■■□□ 2.74
CPNE9-204ENST00000491802 COL5A2P05997 1499 aaPredicted RBP32.18■■■□□ 2.74
CPNE9-204ENST00000491802 CCDC9Q9Y3X0 531 aaKnown RBP32.18■■■□□ 2.74
CPNE9-204ENST00000491802 BRWD3Q6RI45 1802 aa32.17■■■□□ 2.74
CPNE9-204ENST00000491802 CARD14Q9BXL6 1004 aa32.17■■■□□ 2.74
CPNE9-204ENST00000491802 KIF7Q2M1P5 1343 aa32.17■■■□□ 2.74
CPNE9-204ENST00000491802 KIF20BQ96Q89 1820 aa32.16■■■□□ 2.74
CPNE9-204ENST00000491802 THSD7AQ9UPZ6 1657 aa32.15■■■□□ 2.74
CPNE9-204ENST00000491802 SPATA31A1Q5TZJ5 1347 aa32.15■■■□□ 2.74
CPNE9-204ENST00000491802 COG3Q96JB2 828 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms