RNA–Protein interactions for RNA: ENST00000491090.5

SNX5-215, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-215ENST00000491090 LINC01559Q495D7 138 aa9.56□□□□□ -0.88
SNX5-215ENST00000491090 HRCP23327 699 aa9.55□□□□□ -0.88
SNX5-215ENST00000491090 LYPD8Q6UX82 237 aa9.55□□□□□ -0.88
SNX5-215ENST00000491090 RIC3Q7Z5B4 369 aa9.54□□□□□ -0.88
SNX5-215ENST00000491090 ZNF511Q8NB15 262 aa9.54□□□□□ -0.88
SNX5-215ENST00000491090 PDE4DQ08499 809 aa9.53□□□□□ -0.88
SNX5-215ENST00000491090 LCE2CQ5TA81 110 aa9.53□□□□□ -0.88
SNX5-215ENST00000491090 CABLES1Q8TDN4 633 aa9.53□□□□□ -0.88
SNX5-215ENST00000491090 KIFC2Q96AC6 838 aa9.53□□□□□ -0.88
SNX5-215ENST00000491090 TLL2Q9Y6L7 1015 aa9.53□□□□□ -0.88
SNX5-215ENST00000491090 F12P00748 615 aaPredicted RBP9.52□□□□□ -0.89
SNX5-215ENST00000491090 PRPF38BQ5VTL8 546 aaKnown RBP9.52□□□□□ -0.89
SNX5-215ENST00000491090 ZBTB3Q9H5J0 574 aa9.52□□□□□ -0.89
SNX5-215ENST00000491090 LIMD1Q9UGP4 676 aa9.51□□□□□ -0.89
SNX5-215ENST00000491090 WASF2Q9Y6W5 498 aa9.51□□□□□ -0.89
SNX5-215ENST00000491090 MYSM1Q5VVJ2 828 aa9.5□□□□□ -0.89
SNX5-215ENST00000491090 TRIM46Q7Z4K8 759 aa9.5□□□□□ -0.89
SNX5-215ENST00000491090 MPNDQ8N594 471 aa9.5□□□□□ -0.89
SNX5-215ENST00000491090 SLC24A3Q9HC58 644 aa9.5□□□□□ -0.89
SNX5-215ENST00000491090 MAP10Q9P2G4 905 aa9.5□□□□□ -0.89
SNX5-215ENST00000491090 VARSP26640 1264 aaKnown RBP9.49□□□□□ -0.89
SNX5-215ENST00000491090 CTHP32929 405 aa9.49□□□□□ -0.89
SNX5-215ENST00000491090 CSPP1Q1MSJ5 1256 aa9.49□□□□□ -0.89
SNX5-215ENST00000491090 CAPN5O15484 640 aaPredicted RBP9.48□□□□□ -0.89
SNX5-215ENST00000491090 BMP1P13497 986 aa9.48□□□□□ -0.89
SNX5-215ENST00000491090 QPCTQ16769 361 aa9.48□□□□□ -0.89
SNX5-215ENST00000491090 TUSC1Q2TAM9 212 aa9.48□□□□□ -0.89
SNX5-215ENST00000491090 PER1O15534 1290 aaPredicted RBP9.47□□□□□ -0.89
SNX5-215ENST00000491090 LILRB3O75022 631 aa9.46□□□□□ -0.9
SNX5-215ENST00000491090 FOXJ1Q92949 421 aa9.46□□□□□ -0.9
SNX5-215ENST00000491090 PLEKHG3A1L390 1219 aa9.45□□□□□ -0.9
SNX5-215ENST00000491090 SLC16A10Q8TF71 515 aa9.45□□□□□ -0.9
SNX5-215ENST00000491090 NNTQ13423 1086 aa9.44□□□□□ -0.9
SNX5-215ENST00000491090 C4orf48Q5BLP8 95 aa9.43□□□□□ -0.9
SNX5-215ENST00000491090 RTL5Q5HYW3 569 aaPredicted RBP9.42□□□□□ -0.9
SNX5-215ENST00000491090 FAM174AQ8TBP5 190 aa9.42□□□□□ -0.9
SNX5-215ENST00000491090 CDK15Q96Q40 435 aa9.42□□□□□ -0.9
SNX5-215ENST00000491090 KLF16Q9BXK1 252 aaPredicted RBP9.42□□□□□ -0.9
SNX5-215ENST00000491090 NXF1Q9UBU9 619 aaKnown RBP9.42□□□□□ -0.9
SNX5-215ENST00000491090 ADH1CP00326 375 aa9.41□□□□□ -0.9
SNX5-215ENST00000491090 TIMP2P16035 220 aa9.41□□□□□ -0.9
SNX5-215ENST00000491090 FAM181BA6NEQ2 426 aa9.4□□□□□ -0.9
SNX5-215ENST00000491090 NUTM2BA6NNL0 878 aaPredicted RBP9.4□□□□□ -0.9
SNX5-215ENST00000491090 NUTM2EB1AL46 878 aaPredicted RBP9.4□□□□□ -0.9
SNX5-215ENST00000491090 CLK2P49760 499 aaKnown RBP9.4□□□□□ -0.9
SNX5-215ENST00000491090 NUTM2DQ5VT03 806 aaPredicted RBP9.4□□□□□ -0.9
SNX5-215ENST00000491090 NUTM2AQ8IVF1 878 aaPredicted RBP9.4□□□□□ -0.9
SNX5-215ENST00000491090 TSC1Q92574 1164 aa9.39□□□□□ -0.91
SNX5-215ENST00000491090 ZFP42Q96MM3 310 aa9.39□□□□□ -0.91
SNX5-215ENST00000491090 WDR4P57081 412 aaKnown RBP9.38□□□□□ -0.91
SNX5-215ENST00000491090 NPAS3Q8IXF0 933 aa9.38□□□□□ -0.91
SNX5-215ENST00000491090 NR3C2P08235 984 aa9.37□□□□□ -0.91
SNX5-215ENST00000491090 GMPRP36959 345 aa9.37□□□□□ -0.91
SNX5-215ENST00000491090 GRM5P41594 1212 aa9.37□□□□□ -0.91
SNX5-215ENST00000491090 MRPL14Q6P1L8 145 aaKnown RBP9.37□□□□□ -0.91
SNX5-215ENST00000491090 C1QTNF2Q9BXJ5 285 aa9.37□□□□□ -0.91
SNX5-215ENST00000491090 SH3RF1Q7Z6J0 888 aa9.36□□□□□ -0.91
SNX5-215ENST00000491090 BPHLQ86WA6 291 aaPredicted RBP9.36□□□□□ -0.91
SNX5-215ENST00000491090 IRF7Q92985 503 aa9.36□□□□□ -0.91
SNX5-215ENST00000491090 POLR3EQ9NVU0 708 aa9.36□□□□□ -0.91
SNX5-215ENST00000491090 ARID5BQ14865 1188 aa9.35□□□□□ -0.91
SNX5-215ENST00000491090 FBXO31Q5XUX0 539 aaPredicted RBP9.35□□□□□ -0.91
SNX5-215ENST00000491090 SH3BP5LQ7L8J4 393 aa9.35□□□□□ -0.91
SNX5-215ENST00000491090 HELBQ8NG08 1087 aaPredicted RBP9.35□□□□□ -0.91
SNX5-215ENST00000491090 RSPH6AQ9H0K4 717 aa9.35□□□□□ -0.91
SNX5-215ENST00000491090 LORP23490 312 aaPredicted RBP9.34□□□□□ -0.91
SNX5-215ENST00000491090 NR5A1Q13285 461 aa9.34□□□□□ -0.91
SNX5-215ENST00000491090 AGERQ15109 404 aa9.34□□□□□ -0.91
SNX5-215ENST00000491090 ZSCAN1Q8NBB4 408 aa9.34□□□□□ -0.91
SNX5-215ENST00000491090 ARMC2Q8NEN0 867 aa9.34□□□□□ -0.91
SNX5-215ENST00000491090 ZFAND3Q9H8U3 227 aa9.34□□□□□ -0.91
SNX5-215ENST00000491090 ITPKCQ96DU7 683 aa9.33□□□□□ -0.92
SNX5-215ENST00000491090 PURBQ96QR8 312 aaKnown RBP9.33□□□□□ -0.92
SNX5-215ENST00000491090 H3BM21 787 aa9.32□□□□□ -0.92
SNX5-215ENST00000491090 ZIC2O95409 532 aaPredicted RBP9.32□□□□□ -0.92
SNX5-215ENST00000491090 CTDSPL2Q05D32 466 aa9.32□□□□□ -0.92
SNX5-215ENST00000491090 NBPF14Q5TI25 921 aa9.32□□□□□ -0.92
SNX5-215ENST00000491090 VEGFBP49765 207 aa9.31□□□□□ -0.92
SNX5-215ENST00000491090 TRMT44Q8IYL2 757 aaKnown RBP9.31□□□□□ -0.92
SNX5-215ENST00000491090 GPBP1L1Q9HC44 474 aaPredicted RBP9.31□□□□□ -0.92
SNX5-215ENST00000491090 MAP4K5Q9Y4K4 846 aa9.31□□□□□ -0.92
SNX5-215ENST00000491090 SOBPA7XYQ1 873 aa9.3□□□□□ -0.92
SNX5-215ENST00000491090 SCARF1Q14162 830 aa9.3□□□□□ -0.92
SNX5-215ENST00000491090 SH3D19Q5HYK7 790 aa9.29□□□□□ -0.92
SNX5-215ENST00000491090 KDM4CQ9H3R0 1056 aa9.29□□□□□ -0.92
SNX5-215ENST00000491090 ERBB4Q15303 1308 aa9.29□□□□□ -0.92
SNX5-215ENST00000491090 FSHRP23945 695 aa9.28□□□□□ -0.92
SNX5-215ENST00000491090 SKIV2LQ15477 1246 aaKnown RBP9.28□□□□□ -0.92
SNX5-215ENST00000491090 PROCA1Q8NCQ7 364 aaPredicted RBP9.28□□□□□ -0.92
SNX5-215ENST00000491090 LRRN4Q8WUT4 740 aa9.28□□□□□ -0.92
SNX5-215ENST00000491090 GPKOWQ92917 476 aaPredicted RBP eCLIP9.28□□□□□ -0.92
SNX5-215ENST00000491090 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.28□□□□□ -0.92
SNX5-215ENST00000491090 FAM117AQ9C073 453 aa9.28□□□□□ -0.92
SNX5-215ENST00000491090 MAGEB6P1A0A0J9YX57 407 aa9.27□□□□□ -0.93
SNX5-215ENST00000491090 RB1CC1Q8TDY2 1594 aa9.27□□□□□ -0.93
SNX5-215ENST00000491090 UNC13AQ9UPW8 1703 aa9.27□□□□□ -0.93
SNX5-215ENST00000491090 ERFEQ4G0M1 354 aa9.26□□□□□ -0.93
SNX5-215ENST00000491090 PPP2R2DQ66LE6 453 aa9.26□□□□□ -0.93
SNX5-215ENST00000491090 VASH1Q7L8A9 365 aaPredicted RBP9.26□□□□□ -0.93
SNX5-215ENST00000491090 MEIOBQ8N635 442 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms