RNA–Protein interactions for RNA: ENST00000490921.5

PARP1-207, Transcript of poly(ADP-ribose) polymerase 1, humanhuman

TSL 2

Gene PARP1, Length 3,165 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1-207ENST00000490921 PDZRN3Q9UPQ7 1066 aa11.55□□□□□ -0.56
PARP1-207ENST00000490921 ARHGEF28Q8N1W1 1705 aaKnown RBP11.55□□□□□ -0.56
PARP1-207ENST00000490921 C3P01024 1663 aa11.55□□□□□ -0.56
PARP1-207ENST00000490921 WWC1Q8IX03 1113 aa11.55□□□□□ -0.56
PARP1-207ENST00000490921 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.55□□□□□ -0.56
PARP1-207ENST00000490921 KNDC1Q76NI1 1749 aa11.54□□□□□ -0.56
PARP1-207ENST00000490921 SLIT1O75093 1534 aa11.54□□□□□ -0.56
PARP1-207ENST00000490921 RRP9O43818 475 aaKnown RBP11.54□□□□□ -0.56
PARP1-207ENST00000490921 TRAK2O60296 914 aa11.54□□□□□ -0.56
PARP1-207ENST00000490921 MRE11P49959 708 aa11.54□□□□□ -0.56
PARP1-207ENST00000490921 ALKQ9UM73 1620 aa11.54□□□□□ -0.56
PARP1-207ENST00000490921 VSIG10Q8N0Z9 540 aa11.54□□□□□ -0.56
PARP1-207ENST00000490921 CHMP5Q9NZZ3 219 aa11.54□□□□□ -0.56
PARP1-207ENST00000490921 ADAMTSL3P82987 1691 aa11.54□□□□□ -0.56
PARP1-207ENST00000490921 ARHGAP23Q9P227 1491 aa11.53□□□□□ -0.56
PARP1-207ENST00000490921 RARSP54136 660 aaKnown RBP11.53□□□□□ -0.56
PARP1-207ENST00000490921 SPRYD3Q8NCJ5 442 aa11.53□□□□□ -0.56
PARP1-207ENST00000490921 HSP90AA1P07900 732 aaKnown RBP11.53□□□□□ -0.56
PARP1-207ENST00000490921 RLBP1P12271 317 aa11.53□□□□□ -0.56
PARP1-207ENST00000490921 HSP90AA2PQ14568 343 aaPredicted RBP11.53□□□□□ -0.56
PARP1-207ENST00000490921 NRXN3Q9Y4C0 1643 aa11.52□□□□□ -0.56
PARP1-207ENST00000490921 HDGFP51858 240 aaKnown RBP11.52□□□□□ -0.57
PARP1-207ENST00000490921 SIRT1Q96EB6 747 aa11.52□□□□□ -0.57
PARP1-207ENST00000490921 QRICH2Q9H0J4 1663 aa11.52□□□□□ -0.57
PARP1-207ENST00000490921 RIMS2Q9UQ26 1411 aa11.52□□□□□ -0.57
PARP1-207ENST00000490921 TNNQ9UQP3 1299 aa11.52□□□□□ -0.57
PARP1-207ENST00000490921 CFAP70Q5T0N1 1121 aa11.51□□□□□ -0.57
PARP1-207ENST00000490921 CFAP65Q6ZU64 1925 aaKnown RBP11.51□□□□□ -0.57
PARP1-207ENST00000490921 USP32Q8NFA0 1604 aa11.51□□□□□ -0.57
PARP1-207ENST00000490921 PDE4CQ08493 712 aa11.51□□□□□ -0.57
PARP1-207ENST00000490921 ESF1Q9H501 851 aaKnown RBP11.51□□□□□ -0.57
PARP1-207ENST00000490921 GRPEL1Q9HAV7 217 aa11.51□□□□□ -0.57
PARP1-207ENST00000490921 POLR3AO14802 1390 aaPredicted RBP11.51□□□□□ -0.57
PARP1-207ENST00000490921 ZNF142P52746 1687 aaPredicted RBP11.51□□□□□ -0.57
PARP1-207ENST00000490921 FBXO31Q5XUX0 539 aaPredicted RBP11.51□□□□□ -0.57
PARP1-207ENST00000490921 TECPR2O15040 1411 aa11.5□□□□□ -0.57
PARP1-207ENST00000490921 DIP2AQ14689 1571 aa11.5□□□□□ -0.57
PARP1-207ENST00000490921 ZNF692Q9BU19 519 aaPredicted RBP11.5□□□□□ -0.57
PARP1-207ENST00000490921 C22orf23Q9BZE7 217 aa11.5□□□□□ -0.57
PARP1-207ENST00000490921 RWDD1Q9H446 243 aaPredicted RBP11.5□□□□□ -0.57
PARP1-207ENST00000490921 ISY1Q9ULR0 285 aaKnown RBP11.5□□□□□ -0.57
PARP1-207ENST00000490921 MYH16Q9H6N6 1097 aa11.5□□□□□ -0.57
PARP1-207ENST00000490921 ERBB4Q15303 1308 aa11.5□□□□□ -0.57
PARP1-207ENST00000490921 PTPRMP28827 1452 aa11.49□□□□□ -0.57
PARP1-207ENST00000490921 ESPNB1AK53 854 aa11.49□□□□□ -0.57
PARP1-207ENST00000490921 SHPRHQ149N8 1683 aa11.49□□□□□ -0.57
PARP1-207ENST00000490921 DDX11L8A8MPP1 907 aa11.49□□□□□ -0.57
PARP1-207ENST00000490921 CARD14Q9BXL6 1004 aa11.49□□□□□ -0.57
PARP1-207ENST00000490921 IQSEC2Q5JU85 1478 aa11.49□□□□□ -0.57
PARP1-207ENST00000490921 TMEM2Q9UHN6 1383 aa11.48□□□□□ -0.57
PARP1-207ENST00000490921 NCOA3Q9Y6Q9 1424 aa11.48□□□□□ -0.57
PARP1-207ENST00000490921 MED14O60244 1454 aa11.48□□□□□ -0.57
PARP1-207ENST00000490921 DDIT3P35638 169 aa11.48□□□□□ -0.57
PARP1-207ENST00000490921 ABCC11Q96J66 1382 aa11.48□□□□□ -0.57
PARP1-207ENST00000490921 CPS1P31327 1500 aa11.48□□□□□ -0.57
PARP1-207ENST00000490921 YTHDC2Q9H6S0 1430 aaKnown RBP11.47□□□□□ -0.57
PARP1-207ENST00000490921 MFAP1P55081 439 aaKnown RBP11.47□□□□□ -0.57
PARP1-207ENST00000490921 FAM135BQ49AJ0 1406 aa11.47□□□□□ -0.57
PARP1-207ENST00000490921 PLEKHG1Q9ULL1 1385 aa11.47□□□□□ -0.57
PARP1-207ENST00000490921 TRHP20396 242 aaPredicted RBP11.47□□□□□ -0.57
PARP1-207ENST00000490921 BCL2L13Q9BXK5 485 aa11.47□□□□□ -0.57
PARP1-207ENST00000490921 CHGAP10645 457 aaKnown RBP11.46□□□□□ -0.57
PARP1-207ENST00000490921 MVPQ14764 893 aaKnown RBP11.46□□□□□ -0.58
PARP1-207ENST00000490921 WDR63Q8IWG1 891 aa11.46□□□□□ -0.58
PARP1-207ENST00000490921 NEUROD2Q15784 382 aa11.45□□□□□ -0.58
PARP1-207ENST00000490921 RUNDC1Q96C34 613 aa11.45□□□□□ -0.58
PARP1-207ENST00000490921 RRP7AQ9Y3A4 280 aaKnown RBP11.45□□□□□ -0.58
PARP1-207ENST00000490921 HSCBQ8IWL3 235 aa11.45□□□□□ -0.58
PARP1-207ENST00000490921 TCP11L2Q8N4U5 519 aa11.45□□□□□ -0.58
PARP1-207ENST00000490921 TULP4Q9NRJ4 1543 aa11.44□□□□□ -0.58
PARP1-207ENST00000490921 GAS2L3Q86XJ1 694 aa11.44□□□□□ -0.58
PARP1-207ENST00000490921 ADGRB2O60241 1585 aa11.44□□□□□ -0.58
PARP1-207ENST00000490921 PDIA4P13667 645 aaKnown RBP11.43□□□□□ -0.58
PARP1-207ENST00000490921 CCDC27Q2M243 656 aa11.43□□□□□ -0.58
PARP1-207ENST00000490921 TRIM44Q96DX7 344 aaPredicted RBP11.42□□□□□ -0.58
PARP1-207ENST00000490921 CEP170BQ9Y4F5 1589 aaPredicted RBP11.42□□□□□ -0.58
PARP1-207ENST00000490921 TNPO1Q92973 898 aaKnown RBP11.42□□□□□ -0.58
PARP1-207ENST00000490921 SNX21Q969T3 373 aa11.42□□□□□ -0.58
PARP1-207ENST00000490921 RBM25P49756 843 aaKnown RBP11.42□□□□□ -0.58
PARP1-207ENST00000490921 HDAC1Q13547 482 aaPredicted RBP11.42□□□□□ -0.58
PARP1-207ENST00000490921 SMC5Q8IY18 1101 aa11.42□□□□□ -0.58
PARP1-207ENST00000490921 ADAMTS13Q76LX8 1427 aa11.42□□□□□ -0.58
PARP1-207ENST00000490921 PIK3R4Q99570 1358 aa11.41□□□□□ -0.58
PARP1-207ENST00000490921 TPM2P07951 284 aa11.41□□□□□ -0.58
PARP1-207ENST00000490921 ZKSCAN2Q63HK3 967 aa11.41□□□□□ -0.58
PARP1-207ENST00000490921 RIMS1Q86UR5 1692 aaKnown RBP11.41□□□□□ -0.58
PARP1-207ENST00000490921 MLECQ14165 292 aa11.41□□□□□ -0.58
PARP1-207ENST00000490921 DZIP1LQ8IYY4 767 aaKnown RBP11.41□□□□□ -0.58
PARP1-207ENST00000490921 STAG3Q9UJ98 1225 aa11.41□□□□□ -0.58
PARP1-207ENST00000490921 CIZ1Q9ULV3 898 aaPredicted RBP11.41□□□□□ -0.58
PARP1-207ENST00000490921 EVC2Q86UK5 1308 aa11.41□□□□□ -0.58
PARP1-207ENST00000490921 FGD1P98174 961 aa11.4□□□□□ -0.58
PARP1-207ENST00000490921 ATAD2Q6PL18 1390 aa11.4□□□□□ -0.58
PARP1-207ENST00000490921 RAB3GAP1Q15042 981 aa11.4□□□□□ -0.58
PARP1-207ENST00000490921 NSD2O96028 1365 aa11.4□□□□□ -0.58
PARP1-207ENST00000490921 FTSJ3Q8IY81 847 aaKnown RBP11.4□□□□□ -0.59
PARP1-207ENST00000490921 BCL11BQ9C0K0 894 aaPredicted RBP11.4□□□□□ -0.59
PARP1-207ENST00000490921 SKOR2Q2VWA4 1001 aaPredicted RBP11.39□□□□□ -0.59
PARP1-207ENST00000490921 GBP4Q96PP9 640 aa11.39□□□□□ -0.59
PARP1-207ENST00000490921 NCBP3Q53F19 620 aaKnown RBP11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms