RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 GNL2Q13823 731 aaKnown RBP17.79■□□□□ 0.44
ARHGEF39-205ENST00000490638 SLC4A2P04920 1241 aa17.79■□□□□ 0.44
ARHGEF39-205ENST00000490638 PANK1Q8TE04 598 aa17.79■□□□□ 0.44
ARHGEF39-205ENST00000490638 CENPQQ7L2Z9 268 aaPredicted RBP17.78■□□□□ 0.44
ARHGEF39-205ENST00000490638 BTBD11A6QL63 1104 aa17.77■□□□□ 0.44
ARHGEF39-205ENST00000490638 NFE2L2Q16236 605 aa17.77■□□□□ 0.43
ARHGEF39-205ENST00000490638 LRRFIP1Q32MZ4 808 aaKnown RBP17.76■□□□□ 0.43
ARHGEF39-205ENST00000490638 FBXW7Q969H0 707 aa17.76■□□□□ 0.43
ARHGEF39-205ENST00000490638 NEUROD6Q96NK8 337 aa17.76■□□□□ 0.43
ARHGEF39-205ENST00000490638 TCOF1Q13428 1488 aaKnown RBP17.76■□□□□ 0.43
ARHGEF39-205ENST00000490638 NEO1Q92859 1461 aa17.76■□□□□ 0.43
ARHGEF39-205ENST00000490638 GNAT3A8MTJ3 354 aa17.76■□□□□ 0.43
ARHGEF39-205ENST00000490638 HSP90B1P14625 803 aaKnown RBP17.76■□□□□ 0.43
ARHGEF39-205ENST00000490638 MYL6BP14649 208 aa17.76■□□□□ 0.43
ARHGEF39-205ENST00000490638 CCDC184Q52MB2 194 aa17.76■□□□□ 0.43
ARHGEF39-205ENST00000490638 HSP90AB4PQ58FF6 505 aa17.76■□□□□ 0.43
ARHGEF39-205ENST00000490638 EXOC5O00471 708 aa17.76■□□□□ 0.43
ARHGEF39-205ENST00000490638 DNAJC5Q9H3Z4 198 aa17.76■□□□□ 0.43
ARHGEF39-205ENST00000490638 GNAI3P08754 354 aa17.76■□□□□ 0.43
ARHGEF39-205ENST00000490638 TMPOP42166 694 aaKnown RBP17.76■□□□□ 0.43
ARHGEF39-205ENST00000490638 KAT6BQ8WYB5 2073 aa17.76■□□□□ 0.43
ARHGEF39-205ENST00000490638 THUMPD2Q9BTF0 503 aaKnown RBP17.75■□□□□ 0.43
ARHGEF39-205ENST00000490638 NOL10Q9BSC4 688 aaKnown RBP17.75■□□□□ 0.43
ARHGEF39-205ENST00000490638 ZNF428Q96B54 188 aa17.74■□□□□ 0.43
ARHGEF39-205ENST00000490638 DIAPH3Q9NSV4 1193 aa17.74■□□□□ 0.43
ARHGEF39-205ENST00000490638 UHRF1BP1Q6BDS2 1440 aa17.74■□□□□ 0.43
ARHGEF39-205ENST00000490638 AMOTQ4VCS5 1084 aa17.74■□□□□ 0.43
ARHGEF39-205ENST00000490638 MPRIPQ6WCQ1 1025 aa17.73■□□□□ 0.43
ARHGEF39-205ENST00000490638 FBLN1P23142 703 aa17.73■□□□□ 0.43
ARHGEF39-205ENST00000490638 WDR63Q8IWG1 891 aa17.73■□□□□ 0.43
ARHGEF39-205ENST00000490638 SHANK2Q9UPX8 1470 aa17.73■□□□□ 0.43
ARHGEF39-205ENST00000490638 DCTN1Q14203 1278 aa17.73■□□□□ 0.43
ARHGEF39-205ENST00000490638 MCM10Q7L590 875 aa17.73■□□□□ 0.43
ARHGEF39-205ENST00000490638 TMOD3Q9NYL9 352 aa17.73■□□□□ 0.43
ARHGEF39-205ENST00000490638 MIS18AQ9NYP9 233 aa17.72■□□□□ 0.43
ARHGEF39-205ENST00000490638 TTC21BQ7Z4L5 1316 aa17.71■□□□□ 0.43
ARHGEF39-205ENST00000490638 NOL8Q76FK4 1167 aaKnown RBP17.71■□□□□ 0.43
ARHGEF39-205ENST00000490638 ATP7AQ04656 1500 aa17.71■□□□□ 0.43
ARHGEF39-205ENST00000490638 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.71■□□□□ 0.43
ARHGEF39-205ENST00000490638 SURF6O75683 361 aaKnown RBP17.71■□□□□ 0.43
ARHGEF39-205ENST00000490638 LNPKQ9C0E8 428 aa17.71■□□□□ 0.43
ARHGEF39-205ENST00000490638 APPP05067 770 aa17.7■□□□□ 0.42
ARHGEF39-205ENST00000490638 CABLES1Q8TDN4 633 aa17.7■□□□□ 0.42
ARHGEF39-205ENST00000490638 STARD3NLO95772 234 aa17.7■□□□□ 0.42
ARHGEF39-205ENST00000490638 YEATS2Q9ULM3 1422 aa17.69■□□□□ 0.42
ARHGEF39-205ENST00000490638 LMTK3Q96Q04 1460 aa17.69■□□□□ 0.42
ARHGEF39-205ENST00000490638 DISP3Q9P2K9 1392 aa17.69■□□□□ 0.42
ARHGEF39-205ENST00000490638 ANKRD24Q8TF21 1146 aa17.69■□□□□ 0.42
ARHGEF39-205ENST00000490638 DCAF8L1A6NGE4 600 aa17.68■□□□□ 0.42
ARHGEF39-205ENST00000490638 SAMD9Q5K651 1589 aa17.68■□□□□ 0.42
ARHGEF39-205ENST00000490638 FYB1O15117 783 aa17.68■□□□□ 0.42
ARHGEF39-205ENST00000490638 CLASRPQ8N2M8 674 aaKnown RBP17.68■□□□□ 0.42
ARHGEF39-205ENST00000490638 RUFY2Q8WXA3 655 aa17.68■□□□□ 0.42
ARHGEF39-205ENST00000490638 SRCIN1Q9C0H9 1055 aa17.68■□□□□ 0.42
ARHGEF39-205ENST00000490638 HSP90AB2PQ58FF8 381 aa17.68■□□□□ 0.42
ARHGEF39-205ENST00000490638 PLCB2Q00722 1185 aa17.67■□□□□ 0.42
ARHGEF39-205ENST00000490638 C8orf37Q96NL8 207 aa17.67■□□□□ 0.42
ARHGEF39-205ENST00000490638 TTC21AQ8NDW8 1320 aa17.67■□□□□ 0.42
ARHGEF39-205ENST00000490638 NINLQ9Y2I6 1382 aa17.67■□□□□ 0.42
ARHGEF39-205ENST00000490638 WWC1Q8IX03 1113 aa17.66■□□□□ 0.42
ARHGEF39-205ENST00000490638 BCAR3O75815 825 aa17.66■□□□□ 0.42
ARHGEF39-205ENST00000490638 TAF7Q15545 349 aaPredicted RBP17.66■□□□□ 0.42
ARHGEF39-205ENST00000490638 AMOTL1Q8IY63 956 aa17.66■□□□□ 0.42
ARHGEF39-205ENST00000490638 NOB1Q9ULX3 412 aaKnown RBP17.66■□□□□ 0.42
ARHGEF39-205ENST00000490638 SLKQ9H2G2 1235 aaPredicted RBP17.66■□□□□ 0.42
ARHGEF39-205ENST00000490638 BICDL1Q6ZP65 573 aa17.65■□□□□ 0.42
ARHGEF39-205ENST00000490638 LRRC59Q96AG4 307 aaKnown RBP17.65■□□□□ 0.42
ARHGEF39-205ENST00000490638 HMGB2P26583 209 aaKnown RBP17.65■□□□□ 0.42
ARHGEF39-205ENST00000490638 TRIM34Q9BYJ4 488 aa17.65■□□□□ 0.42
ARHGEF39-205ENST00000490638 CFAP65Q6ZU64 1925 aaKnown RBP17.64■□□□□ 0.41
ARHGEF39-205ENST00000490638 NOP58Q9Y2X3 529 aaKnown RBP17.64■□□□□ 0.41
ARHGEF39-205ENST00000490638 ERC2O15083 957 aa17.64■□□□□ 0.41
ARHGEF39-205ENST00000490638 PRAG1Q86YV5 1406 aa17.64■□□□□ 0.41
ARHGEF39-205ENST00000490638 IFNL2Q8IZJ0 200 aa17.64■□□□□ 0.41
ARHGEF39-205ENST00000490638 DUSP27Q5VZP5 1158 aa17.63■□□□□ 0.41
ARHGEF39-205ENST00000490638 CNNM1Q9NRU3 951 aa17.63■□□□□ 0.41
ARHGEF39-205ENST00000490638 GNAI2P04899 355 aa17.63■□□□□ 0.41
ARHGEF39-205ENST00000490638 PPIP5K1Q6PFW1 1433 aa17.63■□□□□ 0.41
ARHGEF39-205ENST00000490638 RAD21O60216 631 aa17.63■□□□□ 0.41
ARHGEF39-205ENST00000490638 CT47B1P0C2W7 299 aaPredicted RBP17.63■□□□□ 0.41
ARHGEF39-205ENST00000490638 CFAP43Q8NDM7 1665 aa17.62■□□□□ 0.41
ARHGEF39-205ENST00000490638 CCT4P50991 539 aaKnown RBP17.62■□□□□ 0.41
ARHGEF39-205ENST00000490638 ZRANB1Q9UGI0 708 aa17.62■□□□□ 0.41
ARHGEF39-205ENST00000490638 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.62■□□□□ 0.41
ARHGEF39-205ENST00000490638 NSD2O96028 1365 aa17.62■□□□□ 0.41
ARHGEF39-205ENST00000490638 ST18O60284 1047 aa17.62■□□□□ 0.41
ARHGEF39-205ENST00000490638 LTKP29376 864 aa17.62■□□□□ 0.41
ARHGEF39-205ENST00000490638 AAMPQ13685 434 aa17.62■□□□□ 0.41
ARHGEF39-205ENST00000490638 ORAI2Q96SN7 254 aa17.62■□□□□ 0.41
ARHGEF39-205ENST00000490638 CHD1O14646 1710 aa17.62■□□□□ 0.41
ARHGEF39-205ENST00000490638 ATF7IPQ6VMQ6 1270 aa17.61■□□□□ 0.41
ARHGEF39-205ENST00000490638 C1orf115Q9H7X2 142 aa17.61■□□□□ 0.41
ARHGEF39-205ENST00000490638 ZKSCAN1P17029 563 aaPredicted RBP17.61■□□□□ 0.41
ARHGEF39-205ENST00000490638 ZFYVE16Q7Z3T8 1539 aa17.61■□□□□ 0.41
ARHGEF39-205ENST00000490638 GCP02774 474 aa17.61■□□□□ 0.41
ARHGEF39-205ENST00000490638 CCDC27Q2M243 656 aa17.61■□□□□ 0.41
ARHGEF39-205ENST00000490638 WASHC4Q2M389 1173 aa17.61■□□□□ 0.41
ARHGEF39-205ENST00000490638 MPHOSPH8Q99549 860 aa17.61■□□□□ 0.41
ARHGEF39-205ENST00000490638 ABCA8O94911 1581 aa17.6■□□□□ 0.41
ARHGEF39-205ENST00000490638 REC8O95072 547 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms