RNA–Protein interactions for RNA: ENST00000490600.6

MCOLN3-206, Transcript of mucolipin 3, humanhuman

TSL 1 (best)

Gene MCOLN3, Length 2,777 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCOLN3-206ENST00000490600 NME9Q86XW9 330 aa18.03■□□□□ 0.48
MCOLN3-206ENST00000490600 CPS1P31327 1500 aa18.03■□□□□ 0.48
MCOLN3-206ENST00000490600 BCL2L13Q9BXK5 485 aa18.03■□□□□ 0.48
MCOLN3-206ENST00000490600 TNNQ9UQP3 1299 aa18.03■□□□□ 0.48
MCOLN3-206ENST00000490600 PRR36Q9H6K5 1346 aa18.03■□□□□ 0.48
MCOLN3-206ENST00000490600 PPM1GO15355 546 aaPredicted RBP18.02■□□□□ 0.48
MCOLN3-206ENST00000490600 PANK1Q8TE04 598 aa18.02■□□□□ 0.48
MCOLN3-206ENST00000490600 NUDT16Q96DE0 195 aaKnown RBP18.02■□□□□ 0.48
MCOLN3-206ENST00000490600 POLKQ9UBT6 870 aa18.02■□□□□ 0.48
MCOLN3-206ENST00000490600 TCERG1O14776 1098 aaKnown RBP18.02■□□□□ 0.47
MCOLN3-206ENST00000490600 RARSP54136 660 aaKnown RBP18.02■□□□□ 0.47
MCOLN3-206ENST00000490600 TRIM35Q9UPQ4 493 aa18.02■□□□□ 0.47
MCOLN3-206ENST00000490600 FAM135BQ49AJ0 1406 aa18.01■□□□□ 0.47
MCOLN3-206ENST00000490600 MAP2P11137 1827 aaKnown RBP18.01■□□□□ 0.47
MCOLN3-206ENST00000490600 TMPOP42166 694 aaKnown RBP18.01■□□□□ 0.47
MCOLN3-206ENST00000490600 TSR2Q969E8 191 aaKnown RBP18.01■□□□□ 0.47
MCOLN3-206ENST00000490600 DIAPH1O60610 1272 aaKnown RBP18.01■□□□□ 0.47
MCOLN3-206ENST00000490600 FRAT1Q92837 279 aaPredicted RBP18■□□□□ 0.47
MCOLN3-206ENST00000490600 SIPA1L2Q9P2F8 1722 aaPredicted RBP18■□□□□ 0.47
MCOLN3-206ENST00000490600 C3P01024 1663 aa18■□□□□ 0.47
MCOLN3-206ENST00000490600 SLC26A8Q96RN1 970 aa18■□□□□ 0.47
MCOLN3-206ENST00000490600 EMILIN1Q9Y6C2 1016 aa18■□□□□ 0.47
MCOLN3-206ENST00000490600 PDE4AP27815 886 aa17.99■□□□□ 0.47
MCOLN3-206ENST00000490600 COG6Q9Y2V7 657 aa17.99■□□□□ 0.47
MCOLN3-206ENST00000490600 CDC42BPGQ6DT37 1551 aa17.99■□□□□ 0.47
MCOLN3-206ENST00000490600 EDC4Q6P2E9 1401 aaKnown RBP17.99■□□□□ 0.47
MCOLN3-206ENST00000490600 NUTM2FA1L443 756 aa17.98■□□□□ 0.47
MCOLN3-206ENST00000490600 HDGFP51858 240 aaKnown RBP17.98■□□□□ 0.47
MCOLN3-206ENST00000490600 LRRC7Q96NW7 1537 aa17.98■□□□□ 0.47
MCOLN3-206ENST00000490600 PTPRUQ92729 1446 aa17.98■□□□□ 0.47
MCOLN3-206ENST00000490600 MON2Q7Z3U7 1717 aa17.98■□□□□ 0.47
MCOLN3-206ENST00000490600 RLBP1P12271 317 aa17.97■□□□□ 0.47
MCOLN3-206ENST00000490600 CCDC61Q9Y6R9 512 aa17.97■□□□□ 0.47
MCOLN3-206ENST00000490600 CENPQQ7L2Z9 268 aaPredicted RBP17.96■□□□□ 0.47
MCOLN3-206ENST00000490600 SIRT1Q96EB6 747 aa17.96■□□□□ 0.47
MCOLN3-206ENST00000490600 PLEKHG1Q9ULL1 1385 aa17.96■□□□□ 0.47
MCOLN3-206ENST00000490600 CANXP27824 592 aaKnown RBP17.96■□□□□ 0.47
MCOLN3-206ENST00000490600 BACH2Q9BYV9 841 aa17.96■□□□□ 0.47
MCOLN3-206ENST00000490600 MAPK8IP3Q9UPT6 1336 aa17.96■□□□□ 0.47
MCOLN3-206ENST00000490600 AKAP12Q02952 1782 aa17.95■□□□□ 0.46
MCOLN3-206ENST00000490600 IGHDP01880 384 aa17.95■□□□□ 0.46
MCOLN3-206ENST00000490600 PDE3AQ14432 1141 aa17.95■□□□□ 0.46
MCOLN3-206ENST00000490600 RRS1Q15050 365 aaKnown RBP17.95■□□□□ 0.46
MCOLN3-206ENST00000490600 HMOX1P09601 288 aa17.94■□□□□ 0.46
MCOLN3-206ENST00000490600 RIPK4P57078 832 aa17.94■□□□□ 0.46
MCOLN3-206ENST00000490600 RSPH6AQ9H0K4 717 aa17.94■□□□□ 0.46
MCOLN3-206ENST00000490600 FER1L4A9Z1Z3 1794 aa17.94■□□□□ 0.46
MCOLN3-206ENST00000490600 PAK3O75914 559 aaPredicted RBP17.94■□□□□ 0.46
MCOLN3-206ENST00000490600 MS4A1P11836 297 aa17.94■□□□□ 0.46
MCOLN3-206ENST00000490600 NCBP3Q53F19 620 aaKnown RBP17.94■□□□□ 0.46
MCOLN3-206ENST00000490600 MYH16Q9H6N6 1097 aa17.94■□□□□ 0.46
MCOLN3-206ENST00000490600 ITSN1Q15811 1721 aa17.93■□□□□ 0.46
MCOLN3-206ENST00000490600 PRKAR2BP31323 418 aa17.93■□□□□ 0.46
MCOLN3-206ENST00000490600 EXOSC9Q06265 439 aaKnown RBP17.93■□□□□ 0.46
MCOLN3-206ENST00000490600 PHACTR3Q96KR7 559 aa17.93■□□□□ 0.46
MCOLN3-206ENST00000490600 CLUAP1Q96AJ1 413 aa17.92■□□□□ 0.46
MCOLN3-206ENST00000490600 NPM2Q86SE8 214 aaKnown RBP17.91■□□□□ 0.46
MCOLN3-206ENST00000490600 FCHSD2O94868 740 aa17.9■□□□□ 0.46
MCOLN3-206ENST00000490600 IL13P35225 146 aa17.9■□□□□ 0.46
MCOLN3-206ENST00000490600 TOPAZ1Q8N9V7 1692 aa17.9■□□□□ 0.46
MCOLN3-206ENST00000490600 ARHGAP23Q9P227 1491 aa17.89■□□□□ 0.45
MCOLN3-206ENST00000490600 TRHP20396 242 aaPredicted RBP17.89■□□□□ 0.45
MCOLN3-206ENST00000490600 COG3Q96JB2 828 aa17.89■□□□□ 0.45
MCOLN3-206ENST00000490600 SLIT1O75093 1534 aa17.89■□□□□ 0.45
MCOLN3-206ENST00000490600 NRKQ7Z2Y5 1582 aa17.89■□□□□ 0.45
MCOLN3-206ENST00000490600 THUMPD2Q9BTF0 503 aaKnown RBP17.89■□□□□ 0.45
MCOLN3-206ENST00000490600 CDK12Q9NYV4 1490 aaPredicted RBP17.88■□□□□ 0.45
MCOLN3-206ENST00000490600 ACEP12821 1306 aa17.88■□□□□ 0.45
MCOLN3-206ENST00000490600 ANP32AP39687 249 aaKnown RBP17.88■□□□□ 0.45
MCOLN3-206ENST00000490600 RGS3P49796 1198 aa17.88■□□□□ 0.45
MCOLN3-206ENST00000490600 AMOTL2Q9Y2J4 779 aa17.88■□□□□ 0.45
MCOLN3-206ENST00000490600 EID1Q9Y6B2 187 aa17.87■□□□□ 0.45
MCOLN3-206ENST00000490600 AATKQ6ZMQ8 1374 aa17.87■□□□□ 0.45
MCOLN3-206ENST00000490600 IPO9Q96P70 1041 aaKnown RBP17.87■□□□□ 0.45
MCOLN3-206ENST00000490600 NOP58Q9Y2X3 529 aaKnown RBP17.86■□□□□ 0.45
MCOLN3-206ENST00000490600 PCDHB15Q9Y5E8 787 aa17.86■□□□□ 0.45
MCOLN3-206ENST00000490600 ERICH6Q7L0X2 663 aa17.86■□□□□ 0.45
MCOLN3-206ENST00000490600 SSH1Q8WYL5 1049 aa17.86■□□□□ 0.45
MCOLN3-206ENST00000490600 TTC21BQ7Z4L5 1316 aa17.85■□□□□ 0.45
MCOLN3-206ENST00000490600 IL16Q14005 1332 aa17.84■□□□□ 0.45
MCOLN3-206ENST00000490600 RGPD8O14715 1765 aaPredicted RBP17.84■□□□□ 0.45
MCOLN3-206ENST00000490600 ZNF692Q9BU19 519 aaPredicted RBP17.84■□□□□ 0.45
MCOLN3-206ENST00000490600 SMC4Q9NTJ3 1288 aa17.84■□□□□ 0.45
MCOLN3-206ENST00000490600 PMFBP1Q8TBY8 1022 aa17.83■□□□□ 0.45
MCOLN3-206ENST00000490600 USP6P35125 1406 aa17.83■□□□□ 0.44
MCOLN3-206ENST00000490600 C8orf34Q49A92 452 aa17.83■□□□□ 0.44
MCOLN3-206ENST00000490600 LAS1LQ9Y4W2 734 aaKnown RBP17.83■□□□□ 0.44
MCOLN3-206ENST00000490600 PLEKHG3A1L390 1219 aa17.82■□□□□ 0.44
MCOLN3-206ENST00000490600 NFE2L2Q16236 605 aa17.82■□□□□ 0.44
MCOLN3-206ENST00000490600 PNNQ9H307 717 aaKnown RBP17.82■□□□□ 0.44
MCOLN3-206ENST00000490600 OVOS2A0A0J9YW53 1432 aa17.82■□□□□ 0.44
MCOLN3-206ENST00000490600 OVOS2Q6IE36 1432 aa17.82■□□□□ 0.44
MCOLN3-206ENST00000490600 DLG5Q8TDM6 1919 aa17.82■□□□□ 0.44
MCOLN3-206ENST00000490600 TRIM27P14373 513 aa17.82■□□□□ 0.44
MCOLN3-206ENST00000490600 TBX22Q9Y458 520 aa17.82■□□□□ 0.44
MCOLN3-206ENST00000490600 SOX12O15370 315 aa17.81■□□□□ 0.44
MCOLN3-206ENST00000490600 ZKSCAN2Q63HK3 967 aa17.81■□□□□ 0.44
MCOLN3-206ENST00000490600 PEAK1Q9H792 1746 aa17.81■□□□□ 0.44
MCOLN3-206ENST00000490600 AEBP1Q8IUX7 1158 aa17.81■□□□□ 0.44
MCOLN3-206ENST00000490600 FAM83GA6ND36 823 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms