RNA–Protein interactions for RNA: ENST00000490389.1

FARP1-207, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 2

Gene FARP1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-207ENST00000490389 NINLQ9Y2I6 1382 aa17.2■□□□□ 0.34
FARP1-207ENST00000490389 NUTM2GQ5VZR2 741 aa17.2■□□□□ 0.34
FARP1-207ENST00000490389 USP6P35125 1406 aa17.2■□□□□ 0.34
FARP1-207ENST00000490389 A0A1W2PP64 1363 aa17.19■□□□□ 0.34
FARP1-207ENST00000490389 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.19■□□□□ 0.34
FARP1-207ENST00000490389 ABTB2Q8N961 1025 aa17.18■□□□□ 0.34
FARP1-207ENST00000490389 CPSF1Q10570 1443 aaKnown RBP17.18■□□□□ 0.34
FARP1-207ENST00000490389 HAP1P54257 671 aaPredicted RBP17.17■□□□□ 0.34
FARP1-207ENST00000490389 CD163L1Q9NR16 1453 aa17.17■□□□□ 0.34
FARP1-207ENST00000490389 TTC21BQ7Z4L5 1316 aa17.17■□□□□ 0.34
FARP1-207ENST00000490389 ARHGEF10O15013 1369 aa17.16■□□□□ 0.34
FARP1-207ENST00000490389 ANKRD36BQ8N2N9 1353 aa17.16■□□□□ 0.34
FARP1-207ENST00000490389 CABLES1Q8TDN4 633 aa17.16■□□□□ 0.34
FARP1-207ENST00000490389 WASHC2AQ641Q2 1341 aa17.16■□□□□ 0.34
FARP1-207ENST00000490389 CCDC7Q96M83 1385 aa17.15■□□□□ 0.34
FARP1-207ENST00000490389 SPATA31A6Q5VVP1 1343 aa17.15■□□□□ 0.34
FARP1-207ENST00000490389 ADAMTS2O95450 1211 aa17.14■□□□□ 0.33
FARP1-207ENST00000490389 MEX3CQ5U5Q3 659 aaKnown RBP17.14■□□□□ 0.33
FARP1-207ENST00000490389 BRD4O60885 1362 aaPredicted RBP17.14■□□□□ 0.33
FARP1-207ENST00000490389 NLRP6P59044 892 aa17.13■□□□□ 0.33
FARP1-207ENST00000490389 PANK3Q9H999 370 aa17.13■□□□□ 0.33
FARP1-207ENST00000490389 EDC4Q6P2E9 1401 aaKnown RBP17.13■□□□□ 0.33
FARP1-207ENST00000490389 SSH2Q76I76 1423 aa17.13■□□□□ 0.33
FARP1-207ENST00000490389 NME9Q86XW9 330 aa17.12■□□□□ 0.33
FARP1-207ENST00000490389 TTC21AQ8NDW8 1320 aa17.12■□□□□ 0.33
FARP1-207ENST00000490389 TRPM3Q9HCF6 1732 aaPredicted RBP17.11■□□□□ 0.33
FARP1-207ENST00000490389 NLRP13Q86W25 1043 aa17.11■□□□□ 0.33
FARP1-207ENST00000490389 CARD14Q9BXL6 1004 aa17.11■□□□□ 0.33
FARP1-207ENST00000490389 ZRANB1Q9UGI0 708 aa17.11■□□□□ 0.33
FARP1-207ENST00000490389 SOX12O15370 315 aa17.1■□□□□ 0.33
FARP1-207ENST00000490389 NSD3Q9BZ95 1437 aa17.1■□□□□ 0.33
FARP1-207ENST00000490389 SHPRHQ149N8 1683 aa17.1■□□□□ 0.33
FARP1-207ENST00000490389 LRP6O75581 1613 aa17.09■□□□□ 0.33
FARP1-207ENST00000490389 MYOM1P52179 1685 aa17.08■□□□□ 0.32
FARP1-207ENST00000490389 C8orf37Q96NL8 207 aa17.08■□□□□ 0.32
FARP1-207ENST00000490389 AKAP12Q02952 1782 aa17.07■□□□□ 0.32
FARP1-207ENST00000490389 ZBTB7CA1YPR0 619 aa17.07■□□□□ 0.32
FARP1-207ENST00000490389 GGNBP2Q9H3C7 697 aa17.07■□□□□ 0.32
FARP1-207ENST00000490389 ALS2Q96Q42 1657 aa17.06■□□□□ 0.32
FARP1-207ENST00000490389 MON2Q7Z3U7 1717 aa17.05■□□□□ 0.32
FARP1-207ENST00000490389 USP19O94966 1318 aa17.05■□□□□ 0.32
FARP1-207ENST00000490389 ZC3H6P61129 1189 aaKnown RBP17.05■□□□□ 0.32
FARP1-207ENST00000490389 NGLY1Q96IV0 654 aa17.05■□□□□ 0.32
FARP1-207ENST00000490389 COG3Q96JB2 828 aa17.05■□□□□ 0.32
FARP1-207ENST00000490389 KNSTRNQ9Y448 316 aa17.05■□□□□ 0.32
FARP1-207ENST00000490389 MED1Q15648 1581 aaPredicted RBP17.05■□□□□ 0.32
FARP1-207ENST00000490389 NRKQ7Z2Y5 1582 aa17.05■□□□□ 0.32
FARP1-207ENST00000490389 COL22A1Q8NFW1 1626 aaPredicted RBP17.04■□□□□ 0.32
FARP1-207ENST00000490389 CGNL1Q0VF96 1302 aa17.04■□□□□ 0.32
FARP1-207ENST00000490389 FYB1O15117 783 aa17.04■□□□□ 0.32
FARP1-207ENST00000490389 GCP02774 474 aa17.04■□□□□ 0.32
FARP1-207ENST00000490389 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
FARP1-207ENST00000490389 PRDM11Q9NQV5 511 aa17.03■□□□□ 0.32
FARP1-207ENST00000490389 PIK3C2AO00443 1686 aa17.03■□□□□ 0.32
FARP1-207ENST00000490389 USP31Q70CQ4 1352 aa17.02■□□□□ 0.32
FARP1-207ENST00000490389 MSH5O43196 834 aa17.02■□□□□ 0.32
FARP1-207ENST00000490389 ZNF316A6NFI3 1004 aaPredicted RBP17.01■□□□□ 0.31
FARP1-207ENST00000490389 CHRNA2Q15822 529 aa17.01■□□□□ 0.31
FARP1-207ENST00000490389 KCNH5Q8NCM2 988 aa17.01■□□□□ 0.31
FARP1-207ENST00000490389 KIAA0232Q92628 1395 aa17.01■□□□□ 0.31
FARP1-207ENST00000490389 DDX10Q13206 875 aaKnown RBP17■□□□□ 0.31
FARP1-207ENST00000490389 AFF2P51816 1311 aa16.99■□□□□ 0.31
FARP1-207ENST00000490389 OVOS2A0A0J9YW53 1432 aa16.99■□□□□ 0.31
FARP1-207ENST00000490389 OVOS2Q6IE36 1432 aa16.99■□□□□ 0.31
FARP1-207ENST00000490389 FAM83GA6ND36 823 aa16.99■□□□□ 0.31
FARP1-207ENST00000490389 FBLN1P23142 703 aa16.98■□□□□ 0.31
FARP1-207ENST00000490389 TNNT2P45379 298 aaPredicted RBP16.98■□□□□ 0.31
FARP1-207ENST00000490389 SLIT3O75094 1523 aa16.97■□□□□ 0.31
FARP1-207ENST00000490389 CC2D1BQ5T0F9 858 aaKnown RBP16.97■□□□□ 0.31
FARP1-207ENST00000490389 PER1O15534 1290 aaPredicted RBP16.96■□□□□ 0.31
FARP1-207ENST00000490389 BTG4Q9NY30 223 aa16.96■□□□□ 0.31
FARP1-207ENST00000490389 USP21Q9UK80 565 aa16.96■□□□□ 0.31
FARP1-207ENST00000490389 PHRF1Q9P1Y6 1649 aaKnown RBP16.96■□□□□ 0.3
FARP1-207ENST00000490389 AMER1Q5JTC6 1135 aaPredicted RBP16.95■□□□□ 0.3
FARP1-207ENST00000490389 MORC1Q86VD1 984 aa16.95■□□□□ 0.3
FARP1-207ENST00000490389 ABCA3Q99758 1704 aa16.95■□□□□ 0.3
FARP1-207ENST00000490389 CPDO75976 1380 aa16.94■□□□□ 0.3
FARP1-207ENST00000490389 RRS1Q15050 365 aaKnown RBP16.94■□□□□ 0.3
FARP1-207ENST00000490389 ARHGEF25Q86VW2 580 aa16.94■□□□□ 0.3
FARP1-207ENST00000490389 FNBP4Q8N3X1 1017 aaPredicted RBP16.94■□□□□ 0.3
FARP1-207ENST00000490389 NSD2O96028 1365 aa16.93■□□□□ 0.3
FARP1-207ENST00000490389 ZNF772Q68DY9 489 aaPredicted RBP16.93■□□□□ 0.3
FARP1-207ENST00000490389 STRN4Q9NRL3 753 aa16.93■□□□□ 0.3
FARP1-207ENST00000490389 RGS17Q9UGC6 210 aaPredicted RBP16.93■□□□□ 0.3
FARP1-207ENST00000490389 CRYBG1Q9Y4K1 1723 aa16.93■□□□□ 0.3
FARP1-207ENST00000490389 NFAT5O94916 1531 aa16.92■□□□□ 0.3
FARP1-207ENST00000490389 AMPHP49418 695 aa16.92■□□□□ 0.3
FARP1-207ENST00000490389 EVA1CP58658 441 aa16.92■□□□□ 0.3
FARP1-207ENST00000490389 UNC5CLQ8IV45 518 aa16.92■□□□□ 0.3
FARP1-207ENST00000490389 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
FARP1-207ENST00000490389 PPM1GO15355 546 aaPredicted RBP16.91■□□□□ 0.3
FARP1-207ENST00000490389 MAP3K19Q56UN5 1328 aa16.91■□□□□ 0.3
FARP1-207ENST00000490389 MARF1Q9Y4F3 1742 aaKnown RBP16.9■□□□□ 0.3
FARP1-207ENST00000490389 QTRT2Q9H974 415 aaKnown RBP16.9■□□□□ 0.3
FARP1-207ENST00000490389 KIF20BQ96Q89 1820 aa16.9■□□□□ 0.3
FARP1-207ENST00000490389 SLIT2O94813 1529 aa16.9■□□□□ 0.3
FARP1-207ENST00000490389 AATKQ6ZMQ8 1374 aa16.89■□□□□ 0.3
FARP1-207ENST00000490389 BCL9LQ86UU0 1499 aa16.89■□□□□ 0.29
FARP1-207ENST00000490389 POTEAQ6S8J7 498 aa16.89■□□□□ 0.29
FARP1-207ENST00000490389 AXIN2Q9Y2T1 843 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms