RNA–Protein interactions for RNA: ENST00000490354.5

RBM39-235, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 436 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-235ENST00000490354 CCDC180Q9P1Z9 1646 aa8.78□□□□□ -1
RBM39-235ENST00000490354 PARP9Q8IXQ6 854 aa8.77□□□□□ -1.01
RBM39-235ENST00000490354 SLC16A10Q8TF71 515 aa8.77□□□□□ -1.01
RBM39-235ENST00000490354 PLEKHG3A1L390 1219 aa8.76□□□□□ -1.01
RBM39-235ENST00000490354 CFAP99D6REC4 459 aa8.76□□□□□ -1.01
RBM39-235ENST00000490354 CTHP32929 405 aa8.76□□□□□ -1.01
RBM39-235ENST00000490354 GJA5P36382 358 aa8.76□□□□□ -1.01
RBM39-235ENST00000490354 NNTQ13423 1086 aa8.76□□□□□ -1.01
RBM39-235ENST00000490354 LYPD8Q6UX82 237 aa8.76□□□□□ -1.01
RBM39-235ENST00000490354 MPNDQ8N594 471 aa8.76□□□□□ -1.01
RBM39-235ENST00000490354 ZFP42Q96MM3 310 aa8.76□□□□□ -1.01
RBM39-235ENST00000490354 SPTLC1O15269 473 aa8.74□□□□□ -1.01
RBM39-235ENST00000490354 HRCP23327 699 aa8.74□□□□□ -1.01
RBM39-235ENST00000490354 VEGFBP49765 207 aa8.74□□□□□ -1.01
RBM39-235ENST00000490354 DIXDC1Q155Q3 683 aa8.74□□□□□ -1.01
RBM39-235ENST00000490354 MAP10Q9P2G4 905 aa8.74□□□□□ -1.01
RBM39-235ENST00000490354 TRIM66O15016 1216 aa8.73□□□□□ -1.01
RBM39-235ENST00000490354 GMPRP36959 345 aa8.73□□□□□ -1.01
RBM39-235ENST00000490354 FOXJ1Q92949 421 aa8.73□□□□□ -1.01
RBM39-235ENST00000490354 ZBTB3Q9H5J0 574 aa8.73□□□□□ -1.01
RBM39-235ENST00000490354 F12P00748 615 aaPredicted RBP8.72□□□□□ -1.01
RBM39-235ENST00000490354 TIMP2P16035 220 aa8.72□□□□□ -1.01
RBM39-235ENST00000490354 WDR4P57081 412 aaKnown RBP8.72□□□□□ -1.01
RBM39-235ENST00000490354 MRPL14Q6P1L8 145 aaKnown RBP8.72□□□□□ -1.01
RBM39-235ENST00000490354 RIC3Q7Z5B4 369 aa8.72□□□□□ -1.01
RBM39-235ENST00000490354 FAM174AQ8TBP5 190 aa8.72□□□□□ -1.01
RBM39-235ENST00000490354 CABLES1Q8TDN4 633 aa8.72□□□□□ -1.01
RBM39-235ENST00000490354 ADH1CP00326 375 aa8.71□□□□□ -1.02
RBM39-235ENST00000490354 CSPP1Q1MSJ5 1256 aa8.71□□□□□ -1.02
RBM39-235ENST00000490354 NPAS3Q8IXF0 933 aa8.71□□□□□ -1.02
RBM39-235ENST00000490354 IRF7Q92985 503 aa8.71□□□□□ -1.02
RBM39-235ENST00000490354 H3BM21 787 aa8.7□□□□□ -1.02
RBM39-235ENST00000490354 PURBQ96QR8 312 aaKnown RBP8.7□□□□□ -1.02
RBM39-235ENST00000490354 KLF16Q9BXK1 252 aaPredicted RBP8.7□□□□□ -1.02
RBM39-235ENST00000490354 PER1O15534 1290 aaPredicted RBP8.69□□□□□ -1.02
RBM39-235ENST00000490354 ARID5BQ14865 1188 aa8.69□□□□□ -1.02
RBM39-235ENST00000490354 PRPF38BQ5VTL8 546 aaKnown RBP8.69□□□□□ -1.02
RBM39-235ENST00000490354 AK7Q96M32 723 aa8.69□□□□□ -1.02
RBM39-235ENST00000490354 CDK15Q96Q40 435 aa8.69□□□□□ -1.02
RBM39-235ENST00000490354 ERBB4Q15303 1308 aa8.69□□□□□ -1.02
RBM39-235ENST00000490354 SOBPA7XYQ1 873 aa8.68□□□□□ -1.02
RBM39-235ENST00000490354 SCARF1Q14162 830 aa8.68□□□□□ -1.02
RBM39-235ENST00000490354 C4orf48Q5BLP8 95 aa8.68□□□□□ -1.02
RBM39-235ENST00000490354 LORP23490 312 aaPredicted RBP8.67□□□□□ -1.02
RBM39-235ENST00000490354 TSC1Q92574 1164 aa8.67□□□□□ -1.02
RBM39-235ENST00000490354 ZFAND3Q9H8U3 227 aa8.67□□□□□ -1.02
RBM39-235ENST00000490354 LIMD1Q9UGP4 676 aa8.67□□□□□ -1.02
RBM39-235ENST00000490354 ZIC2O95409 532 aaPredicted RBP8.66□□□□□ -1.02
RBM39-235ENST00000490354 NR3C2P08235 984 aa8.66□□□□□ -1.02
RBM39-235ENST00000490354 AGERQ15109 404 aa8.66□□□□□ -1.02
RBM39-235ENST00000490354 ZSCAN1Q8NBB4 408 aa8.66□□□□□ -1.02
RBM39-235ENST00000490354 QPCTQ16769 361 aa8.65□□□□□ -1.02
RBM39-235ENST00000490354 MYSM1Q5VVJ2 828 aa8.65□□□□□ -1.02
RBM39-235ENST00000490354 ITPKCQ96DU7 683 aa8.65□□□□□ -1.02
RBM39-235ENST00000490354 NUTM2BA6NNL0 878 aaPredicted RBP8.64□□□□□ -1.03
RBM39-235ENST00000490354 NUTM2EB1AL46 878 aaPredicted RBP8.64□□□□□ -1.03
RBM39-235ENST00000490354 GRM5P41594 1212 aa8.64□□□□□ -1.03
RBM39-235ENST00000490354 NR5A1Q13285 461 aa8.64□□□□□ -1.03
RBM39-235ENST00000490354 NUTM2DQ5VT03 806 aaPredicted RBP8.64□□□□□ -1.03
RBM39-235ENST00000490354 BPHLQ86WA6 291 aaPredicted RBP8.64□□□□□ -1.03
RBM39-235ENST00000490354 NUTM2AQ8IVF1 878 aaPredicted RBP8.64□□□□□ -1.03
RBM39-235ENST00000490354 FAM181BA6NEQ2 426 aa8.63□□□□□ -1.03
RBM39-235ENST00000490354 PDE4DQ08499 809 aa8.63□□□□□ -1.03
RBM39-235ENST00000490354 C6orf118Q5T5N4 469 aa8.63□□□□□ -1.03
RBM39-235ENST00000490354 LILRB3O75022 631 aa8.62□□□□□ -1.03
RBM39-235ENST00000490354 TUSC1Q2TAM9 212 aa8.61□□□□□ -1.03
RBM39-235ENST00000490354 SH3RF1Q7Z6J0 888 aa8.6□□□□□ -1.03
RBM39-235ENST00000490354 C1QTNF2Q9BXJ5 285 aa8.6□□□□□ -1.03
RBM39-235ENST00000490354 MAN1A2O60476 641 aa8.59□□□□□ -1.03
RBM39-235ENST00000490354 RTL5Q5HYW3 569 aaPredicted RBP8.59□□□□□ -1.03
RBM39-235ENST00000490354 ARMC2Q8NEN0 867 aa8.59□□□□□ -1.03
RBM39-235ENST00000490354 VSIG8P0DPA2 414 aa8.58□□□□□ -1.04
RBM39-235ENST00000490354 BMP2P12643 396 aa8.58□□□□□ -1.04
RBM39-235ENST00000490354 FSHRP23945 695 aa8.58□□□□□ -1.04
RBM39-235ENST00000490354 LINC00528Q8N1L1 170 aa8.58□□□□□ -1.04
RBM39-235ENST00000490354 MEIOBQ8N635 442 aa8.58□□□□□ -1.04
RBM39-235ENST00000490354 HELBQ8NG08 1087 aaPredicted RBP8.58□□□□□ -1.04
RBM39-235ENST00000490354 SLC24A3Q9HC58 644 aa8.58□□□□□ -1.04
RBM39-235ENST00000490354 MAGEB6P1A0A0J9YX57 407 aa8.57□□□□□ -1.04
RBM39-235ENST00000490354 NBPF14Q5TI25 921 aa8.57□□□□□ -1.04
RBM39-235ENST00000490354 SH3BP5LQ7L8J4 393 aa8.57□□□□□ -1.04
RBM39-235ENST00000490354 UPP2O95045 317 aa8.56□□□□□ -1.04
RBM39-235ENST00000490354 CLK2P49760 499 aaKnown RBP8.56□□□□□ -1.04
RBM39-235ENST00000490354 VASH1Q7L8A9 365 aaPredicted RBP8.56□□□□□ -1.04
RBM39-235ENST00000490354 MAP4K5Q9Y4K4 846 aa8.56□□□□□ -1.04
RBM39-235ENST00000490354 TRMT44Q8IYL2 757 aaKnown RBP8.55□□□□□ -1.04
RBM39-235ENST00000490354 CARD14Q9BXL6 1004 aa8.55□□□□□ -1.04
RBM39-235ENST00000490354 SOS2Q07890 1332 aaPredicted RBP8.54□□□□□ -1.04
RBM39-235ENST00000490354 PPFIA3O75145 1194 aa8.54□□□□□ -1.04
RBM39-235ENST00000490354 POLR3EQ9NVU0 708 aa8.54□□□□□ -1.04
RBM39-235ENST00000490354 DNMT3LQ9UJW3 386 aa8.54□□□□□ -1.04
RBM39-235ENST00000490354 CCDC116Q8IYX3 515 aa8.53□□□□□ -1.04
RBM39-235ENST00000490354 ZCCHC6Q5VYS8 1495 aaKnown RBP8.52□□□□□ -1.05
RBM39-235ENST00000490354 CTDSPL2Q05D32 466 aa8.52□□□□□ -1.05
RBM39-235ENST00000490354 ERFEQ4G0M1 354 aa8.52□□□□□ -1.05
RBM39-235ENST00000490354 EMILIN1Q9Y6C2 1016 aa8.52□□□□□ -1.05
RBM39-235ENST00000490354 GPKOWQ92917 476 aaPredicted RBP eCLIP8.51□□□□□ -1.05
RBM39-235ENST00000490354 TSEN34Q9BSV6 310 aaKnown RBP8.51□□□□□ -1.05
RBM39-235ENST00000490354 RSPH6AQ9H0K4 717 aa8.51□□□□□ -1.05
RBM39-235ENST00000490354 CBLBQ13191 982 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms