RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 OATP04181 439 aa6.29□□□□□ -1.4
CRNKL1-203ENST00000490258 COL25A1Q9BXS0 654 aaPredicted RBP6.29□□□□□ -1.4
CRNKL1-203ENST00000490258 PROCP04070 461 aa6.28□□□□□ -1.4
CRNKL1-203ENST00000490258 Q3C1V9 767 aa6.28□□□□□ -1.4
CRNKL1-203ENST00000490258 SMYD5Q6GMV2 418 aa6.28□□□□□ -1.4
CRNKL1-203ENST00000490258 GPIHBP1Q8IV16 184 aa6.28□□□□□ -1.4
CRNKL1-203ENST00000490258 GALNT6Q8NCL4 622 aa6.28□□□□□ -1.4
CRNKL1-203ENST00000490258 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
CRNKL1-203ENST00000490258 ITGB2P05107 769 aa6.27□□□□□ -1.41
CRNKL1-203ENST00000490258 SLURP2P0DP57 97 aa6.27□□□□□ -1.41
CRNKL1-203ENST00000490258 GCGRP47871 477 aa6.27□□□□□ -1.41
CRNKL1-203ENST00000490258 UNC13AQ9UPW8 1703 aa6.26□□□□□ -1.41
CRNKL1-203ENST00000490258 DDX11L8A8MPP1 907 aa6.25□□□□□ -1.41
CRNKL1-203ENST00000490258 TIMP2P16035 220 aa6.25□□□□□ -1.41
CRNKL1-203ENST00000490258 GRIPAP1Q4V328 841 aa6.25□□□□□ -1.41
CRNKL1-203ENST00000490258 RNFT1Q5M7Z0 435 aa6.25□□□□□ -1.41
CRNKL1-203ENST00000490258 DCAF5Q96JK2 942 aa6.25□□□□□ -1.41
CRNKL1-203ENST00000490258 USB1Q9BQ65 265 aaKnown RBP6.25□□□□□ -1.41
CRNKL1-203ENST00000490258 DAXXQ9UER7 740 aaPredicted RBP6.25□□□□□ -1.41
CRNKL1-203ENST00000490258 ZCCHC6Q5VYS8 1495 aaKnown RBP6.25□□□□□ -1.41
CRNKL1-203ENST00000490258 WDR4P57081 412 aaKnown RBP6.24□□□□□ -1.41
CRNKL1-203ENST00000490258 NNTQ13423 1086 aa6.24□□□□□ -1.41
CRNKL1-203ENST00000490258 NLRP7Q8WX94 980 aa6.24□□□□□ -1.41
CRNKL1-203ENST00000490258 ADH1CP00326 375 aa6.23□□□□□ -1.41
CRNKL1-203ENST00000490258 MAP2K5Q13163 448 aa6.23□□□□□ -1.41
CRNKL1-203ENST00000490258 C6orf118Q5T5N4 469 aa6.22□□□□□ -1.41
CRNKL1-203ENST00000490258 SHROOM4Q9ULL8 1493 aa6.22□□□□□ -1.41
CRNKL1-203ENST00000490258 SCRIBQ14160 1630 aa6.21□□□□□ -1.41
CRNKL1-203ENST00000490258 PLEKHG3A1L390 1219 aa6.21□□□□□ -1.42
CRNKL1-203ENST00000490258 IRF6O14896 467 aa6.21□□□□□ -1.42
CRNKL1-203ENST00000490258 ZMYND10O75800 440 aa6.21□□□□□ -1.42
CRNKL1-203ENST00000490258 NANOS1Q8WY41 292 aaKnown RBP6.21□□□□□ -1.42
CRNKL1-203ENST00000490258 TLL2Q9Y6L7 1015 aa6.21□□□□□ -1.42
CRNKL1-203ENST00000490258 SH3BP2P78314 561 aa6.2□□□□□ -1.42
CRNKL1-203ENST00000490258 ZC3H15Q8WU90 426 aaKnown RBP6.2□□□□□ -1.42
CRNKL1-203ENST00000490258 KLF16Q9BXK1 252 aaPredicted RBP6.2□□□□□ -1.42
CRNKL1-203ENST00000490258 PHF20L1A8MW92 1017 aa6.19□□□□□ -1.42
CRNKL1-203ENST00000490258 BARGINQ6ZT62 677 aa6.19□□□□□ -1.42
CRNKL1-203ENST00000490258 SULF1Q8IWU6 871 aa6.19□□□□□ -1.42
CRNKL1-203ENST00000490258 CCDC102AQ96A19 550 aa6.19□□□□□ -1.42
CRNKL1-203ENST00000490258 DNMT3LQ9UJW3 386 aa6.19□□□□□ -1.42
CRNKL1-203ENST00000490258 BAG6P46379 1132 aa6.18□□□□□ -1.42
CRNKL1-203ENST00000490258 MAP3K10Q02779 954 aa6.18□□□□□ -1.42
CRNKL1-203ENST00000490258 PTCRAQ6ISU1 281 aaPredicted RBP6.18□□□□□ -1.42
CRNKL1-203ENST00000490258 MPNDQ8N594 471 aa6.18□□□□□ -1.42
CRNKL1-203ENST00000490258 MINK1Q8N4C8 1332 aaPredicted RBP6.18□□□□□ -1.42
CRNKL1-203ENST00000490258 BMP2P12643 396 aa6.17□□□□□ -1.42
CRNKL1-203ENST00000490258 LYPD4Q6UWN0 246 aa6.17□□□□□ -1.42
CRNKL1-203ENST00000490258 SOS2Q07890 1332 aaPredicted RBP6.17□□□□□ -1.42
CRNKL1-203ENST00000490258 UPP2O95045 317 aa6.15□□□□□ -1.42
CRNKL1-203ENST00000490258 FURINP09958 794 aa6.15□□□□□ -1.42
CRNKL1-203ENST00000490258 JUNDP17535 347 aa6.15□□□□□ -1.42
CRNKL1-203ENST00000490258 PTSQ03393 145 aa6.15□□□□□ -1.42
CRNKL1-203ENST00000490258 CNTNAP5Q8WYK1 1306 aa6.15□□□□□ -1.43
CRNKL1-203ENST00000490258 ZIC2O95409 532 aaPredicted RBP6.14□□□□□ -1.43
CRNKL1-203ENST00000490258 ADAMTS2O95450 1211 aa6.14□□□□□ -1.43
CRNKL1-203ENST00000490258 CD46P15529 392 aa6.14□□□□□ -1.43
CRNKL1-203ENST00000490258 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.14□□□□□ -1.438e-6■■□□□ 12.6
CRNKL1-203ENST00000490258 BEND7Q8N7W2 519 aaPredicted RBP6.14□□□□□ -1.43
CRNKL1-203ENST00000490258 NUDT12Q9BQG2 462 aa6.14□□□□□ -1.43
CRNKL1-203ENST00000490258 ZFAND3Q9H8U3 227 aa6.14□□□□□ -1.43
CRNKL1-203ENST00000490258 ENAMQ9NRM1 1142 aa6.14□□□□□ -1.43
CRNKL1-203ENST00000490258 VARSP26640 1264 aaKnown RBP6.13□□□□□ -1.43
CRNKL1-203ENST00000490258 AMHR2Q16671 573 aa6.13□□□□□ -1.43
CRNKL1-203ENST00000490258 LINC00528Q8N1L1 170 aa6.13□□□□□ -1.43
CRNKL1-203ENST00000490258 CELA2BP08218 269 aaPredicted RBP6.12□□□□□ -1.43
CRNKL1-203ENST00000490258 VWA5B2Q8N398 1253 aa6.12□□□□□ -1.43
CRNKL1-203ENST00000490258 CCDC155Q8N6L0 562 aa6.12□□□□□ -1.43
CRNKL1-203ENST00000490258 ITPKCQ96DU7 683 aa6.12□□□□□ -1.43
CRNKL1-203ENST00000490258 FAM217BQ9NTX9 383 aaPredicted RBP6.12□□□□□ -1.43
CRNKL1-203ENST00000490258 TULP1O00294 542 aaPredicted RBP6.11□□□□□ -1.43
CRNKL1-203ENST00000490258 MDM2Q00987 491 aaPredicted RBP6.11□□□□□ -1.43
CRNKL1-203ENST00000490258 SV2AQ7L0J3 742 aa6.11□□□□□ -1.43
CRNKL1-203ENST00000490258 PODNQ7Z5L7 613 aa6.11□□□□□ -1.43
CRNKL1-203ENST00000490258 SRSF11Q05519 484 aaKnown RBP6.1□□□□□ -1.43
CRNKL1-203ENST00000490258 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
CRNKL1-203ENST00000490258 CDC14CA4D256 554 aa6.09□□□□□ -1.43
CRNKL1-203ENST00000490258 LINC01559Q495D7 138 aa6.09□□□□□ -1.43
CRNKL1-203ENST00000490258 MEIOBQ8N635 442 aa6.09□□□□□ -1.43
CRNKL1-203ENST00000490258 TRIM66O15016 1216 aa6.08□□□□□ -1.44
CRNKL1-203ENST00000490258 BAP1Q92560 729 aa6.08□□□□□ -1.44
CRNKL1-203ENST00000490258 KRTAP4-7Q9BYR0 210 aa6.08□□□□□ -1.44
CRNKL1-203ENST00000490258 GPCPD1Q9NPB8 672 aa6.08□□□□□ -1.44
CRNKL1-203ENST00000490258 TTLL8A6PVC2 850 aa6.07□□□□□ -1.44
CRNKL1-203ENST00000490258 ITGA6P23229 1130 aa6.07□□□□□ -1.44
CRNKL1-203ENST00000490258 PARP9Q8IXQ6 854 aa6.07□□□□□ -1.44
CRNKL1-203ENST00000490258 HLA-CQ95604 372 aa6.07□□□□□ -1.44
CRNKL1-203ENST00000490258 SLC35F4A4IF30 521 aa6.06□□□□□ -1.44
CRNKL1-203ENST00000490258 KDM4AO75164 1064 aa6.06□□□□□ -1.44
CRNKL1-203ENST00000490258 CCNYL3P0C7X3 344 aa6.06□□□□□ -1.44
CRNKL1-203ENST00000490258 CLCN1P35523 988 aa6.06□□□□□ -1.44
CRNKL1-203ENST00000490258 ZNF511Q8NB15 262 aa6.06□□□□□ -1.44
CRNKL1-203ENST00000490258 UNC93B1Q9H1C4 597 aa6.06□□□□□ -1.44
CRNKL1-203ENST00000490258 SPTLC1O15269 473 aa6.05□□□□□ -1.44
CRNKL1-203ENST00000490258 HOXA2O43364 376 aa6.05□□□□□ -1.44
CRNKL1-203ENST00000490258 MS4A1P11836 297 aa6.05□□□□□ -1.44
CRNKL1-203ENST00000490258 SH3RF1Q7Z6J0 888 aa6.05□□□□□ -1.44
CRNKL1-203ENST00000490258 FAM174AQ8TBP5 190 aa6.05□□□□□ -1.44
CRNKL1-203ENST00000490258 CDK15Q96Q40 435 aa6.05□□□□□ -1.44
CRNKL1-203ENST00000490258 TSEN34Q9BSV6 310 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms