RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 SLIT3O75094 1523 aa17.26■□□□□ 0.35
SRSF4-204ENST00000489898 QTRT2Q9H974 415 aaKnown RBP17.25■□□□□ 0.35
SRSF4-204ENST00000489898 USP21Q9UK80 565 aa17.25■□□□□ 0.35
SRSF4-204ENST00000489898 SSH2Q76I76 1423 aa17.24■□□□□ 0.35
SRSF4-204ENST00000489898 CABLES1Q8TDN4 633 aa17.24■□□□□ 0.35
SRSF4-204ENST00000489898 NGLY1Q96IV0 654 aa17.24■□□□□ 0.35
SRSF4-204ENST00000489898 RGPD5Q99666 1765 aa17.24■□□□□ 0.35
SRSF4-204ENST00000489898 NBPF8Q3BBV2 869 aa17.21■□□□□ 0.35
SRSF4-204ENST00000489898 TRPC5Q9UL62 973 aaPredicted RBP17.21■□□□□ 0.35
SRSF4-204ENST00000489898 PPIP5K1Q6PFW1 1433 aa17.21■□□□□ 0.34
SRSF4-204ENST00000489898 NUDT16Q96DE0 195 aaKnown RBP17.2■□□□□ 0.34
SRSF4-204ENST00000489898 CENPJQ9HC77 1338 aaPredicted RBP17.2■□□□□ 0.34
SRSF4-204ENST00000489898 CD163L1Q9NR16 1453 aa17.19■□□□□ 0.34
SRSF4-204ENST00000489898 PARP4Q9UKK3 1724 aaKnown RBP17.19■□□□□ 0.34
SRSF4-204ENST00000489898 SBNO2Q9Y2G9 1366 aa17.19■□□□□ 0.34
SRSF4-204ENST00000489898 CAMTA1Q9Y6Y1 1673 aa17.19■□□□□ 0.34
SRSF4-204ENST00000489898 CDK19Q9BWU1 502 aa17.18■□□□□ 0.34
SRSF4-204ENST00000489898 USP6P35125 1406 aa17.18■□□□□ 0.34
SRSF4-204ENST00000489898 RGPD1P0DJD0 1748 aa17.18■□□□□ 0.34
SRSF4-204ENST00000489898 USP19O94966 1318 aa17.18■□□□□ 0.34
SRSF4-204ENST00000489898 NFAT5O94916 1531 aa17.17■□□□□ 0.34
SRSF4-204ENST00000489898 PLEKHG3A1L390 1219 aa17.17■□□□□ 0.34
SRSF4-204ENST00000489898 UNC5CLQ8IV45 518 aa17.17■□□□□ 0.34
SRSF4-204ENST00000489898 LTN1O94822 1766 aa17.17■□□□□ 0.34
SRSF4-204ENST00000489898 MYOM1P52179 1685 aa17.16■□□□□ 0.34
SRSF4-204ENST00000489898 PEAK1Q9H792 1746 aa17.16■□□□□ 0.34
SRSF4-204ENST00000489898 PSME1Q06323 249 aa17.16■□□□□ 0.34
SRSF4-204ENST00000489898 GJD4Q96KN9 370 aaPredicted RBP17.16■□□□□ 0.34
SRSF4-204ENST00000489898 LRRC37A3O60309 1634 aa17.16■□□□□ 0.34
SRSF4-204ENST00000489898 ACEP12821 1306 aa17.16■□□□□ 0.34
SRSF4-204ENST00000489898 ATAD2Q6PL18 1390 aa17.15■□□□□ 0.34
SRSF4-204ENST00000489898 FAM83GA6ND36 823 aa17.14■□□□□ 0.33
SRSF4-204ENST00000489898 SBF2Q86WG5 1849 aa17.14■□□□□ 0.33
SRSF4-204ENST00000489898 ROCK2O75116 1388 aaKnown RBP17.14■□□□□ 0.33
SRSF4-204ENST00000489898 CPSF1Q10570 1443 aaKnown RBP17.13■□□□□ 0.33
SRSF4-204ENST00000489898 VPS72Q15906 364 aa17.13■□□□□ 0.33
SRSF4-204ENST00000489898 RREB1Q92766 1687 aa17.13■□□□□ 0.33
SRSF4-204ENST00000489898 CCDC61Q9Y6R9 512 aa17.12■□□□□ 0.33
SRSF4-204ENST00000489898 CPDO75976 1380 aa17.12■□□□□ 0.33
SRSF4-204ENST00000489898 KIAA0232Q92628 1395 aa17.12■□□□□ 0.33
SRSF4-204ENST00000489898 ONECUT3O60422 494 aaPredicted RBP17.1■□□□□ 0.33
SRSF4-204ENST00000489898 CABP2Q9NPB3 220 aa17.1■□□□□ 0.33
SRSF4-204ENST00000489898 COL5A2P05997 1499 aaPredicted RBP17.1■□□□□ 0.33
SRSF4-204ENST00000489898 NGDNQ8NEJ9 315 aaKnown RBP17.09■□□□□ 0.33
SRSF4-204ENST00000489898 ABCC6O95255 1503 aa17.08■□□□□ 0.32
SRSF4-204ENST00000489898 BRD4O60885 1362 aaPredicted RBP17.07■□□□□ 0.32
SRSF4-204ENST00000489898 NEUROD1Q13562 356 aa17.07■□□□□ 0.32
SRSF4-204ENST00000489898 NUP188Q5SRE5 1749 aa17.07■□□□□ 0.32
SRSF4-204ENST00000489898 PLEKHG5O94827 1062 aa17.06■□□□□ 0.32
SRSF4-204ENST00000489898 LMOD2Q6P5Q4 547 aa17.06■□□□□ 0.32
SRSF4-204ENST00000489898 RGPD3A6NKT7 1758 aaPredicted RBP17.06■□□□□ 0.32
SRSF4-204ENST00000489898 RGPD4Q7Z3J3 1758 aa17.06■□□□□ 0.32
SRSF4-204ENST00000489898 SPATA31A5Q5VU36 1347 aa17.05■□□□□ 0.32
SRSF4-204ENST00000489898 SPATA31A7Q8IWB4 1347 aa17.05■□□□□ 0.32
SRSF4-204ENST00000489898 BTG4Q9NY30 223 aa17.05■□□□□ 0.32
SRSF4-204ENST00000489898 BLMP54132 1417 aaPredicted RBP17.04■□□□□ 0.32
SRSF4-204ENST00000489898 KIF20BQ96Q89 1820 aa17.04■□□□□ 0.32
SRSF4-204ENST00000489898 TRIM26Q12899 539 aaPredicted RBP17.03■□□□□ 0.32
SRSF4-204ENST00000489898 NUTM2GQ5VZR2 741 aa17.03■□□□□ 0.32
SRSF4-204ENST00000489898 SHANK3Q9BYB0 1731 aa17.03■□□□□ 0.32
SRSF4-204ENST00000489898 SRPK2P78362 688 aaKnown RBP17.02■□□□□ 0.32
SRSF4-204ENST00000489898 SEPT12Q8IYM1 358 aa17.02■□□□□ 0.32
SRSF4-204ENST00000489898 RGPD2P0DJD1 1756 aa17.02■□□□□ 0.31
SRSF4-204ENST00000489898 TONSLQ96HA7 1378 aa17.02■□□□□ 0.31
SRSF4-204ENST00000489898 SPATA31A1Q5TZJ5 1347 aa17.01■□□□□ 0.31
SRSF4-204ENST00000489898 LRP5O75197 1615 aa17.01■□□□□ 0.31
SRSF4-204ENST00000489898 PAK3O75914 559 aaPredicted RBP17.01■□□□□ 0.31
SRSF4-204ENST00000489898 CHRNA2Q15822 529 aa17.01■□□□□ 0.31
SRSF4-204ENST00000489898 CABP1Q9NZU7 370 aa17.01■□□□□ 0.31
SRSF4-204ENST00000489898 FAM208AQ9UK61 1670 aaKnown RBP17.01■□□□□ 0.31
SRSF4-204ENST00000489898 EVC2Q86UK5 1308 aa17■□□□□ 0.31
SRSF4-204ENST00000489898 OVOS2A0A0J9YW53 1432 aa17■□□□□ 0.31
SRSF4-204ENST00000489898 DISP2A7MBM2 1401 aa17■□□□□ 0.31
SRSF4-204ENST00000489898 OVOS2Q6IE36 1432 aa17■□□□□ 0.31
SRSF4-204ENST00000489898 ANKRD26Q9UPS8 1709 aa17■□□□□ 0.31
SRSF4-204ENST00000489898 TESK2Q96S53 571 aa16.99■□□□□ 0.31
SRSF4-204ENST00000489898 PRDM11Q9NQV5 511 aa16.99■□□□□ 0.31
SRSF4-204ENST00000489898 HAP1P54257 671 aaPredicted RBP16.98■□□□□ 0.31
SRSF4-204ENST00000489898 FAM98CQ17RN3 349 aaKnown RBP16.97■□□□□ 0.31
SRSF4-204ENST00000489898 A0A1W2PP64 1363 aa16.97■□□□□ 0.31
SRSF4-204ENST00000489898 TTC21BQ7Z4L5 1316 aa16.96■□□□□ 0.31
SRSF4-204ENST00000489898 ZC3H6P61129 1189 aaKnown RBP16.96■□□□□ 0.31
SRSF4-204ENST00000489898 AATKQ6ZMQ8 1374 aa16.96■□□□□ 0.31
SRSF4-204ENST00000489898 USP31Q70CQ4 1352 aa16.96■□□□□ 0.31
SRSF4-204ENST00000489898 GCP02774 474 aa16.95■□□□□ 0.3
SRSF4-204ENST00000489898 ABTB2Q8N961 1025 aa16.95■□□□□ 0.3
SRSF4-204ENST00000489898 CRB1P82279 1406 aa16.94■□□□□ 0.3
SRSF4-204ENST00000489898 EDC4Q6P2E9 1401 aaKnown RBP16.94■□□□□ 0.3
SRSF4-204ENST00000489898 KRT27Q7Z3Y8 459 aa16.93■□□□□ 0.3
SRSF4-204ENST00000489898 CARD11Q9BXL7 1154 aa16.93■□□□□ 0.3
SRSF4-204ENST00000489898 NHSQ6T4R5 1651 aa16.93■□□□□ 0.3
SRSF4-204ENST00000489898 KTN1Q86UP2 1357 aaKnown RBP16.92■□□□□ 0.3
SRSF4-204ENST00000489898 LARP1Q6PKG0 1096 aaKnown RBP16.92■□□□□ 0.3
SRSF4-204ENST00000489898 TTC21AQ8NDW8 1320 aa16.92■□□□□ 0.3
SRSF4-204ENST00000489898 DEFB132Q7Z7B7 95 aa16.91■□□□□ 0.3
SRSF4-204ENST00000489898 FAM182BQ5T319 152 aa16.9■□□□□ 0.3
SRSF4-204ENST00000489898 NLRP13Q86W25 1043 aa16.9■□□□□ 0.3
SRSF4-204ENST00000489898 ZRANB1Q9UGI0 708 aa16.9■□□□□ 0.3
SRSF4-204ENST00000489898 AXIN2Q9Y2T1 843 aa16.9■□□□□ 0.3
SRSF4-204ENST00000489898 USP47Q96K76 1375 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms