RNA–Protein interactions for RNA: ENST00000489870.1

CCT3-213, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 827 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-213ENST00000489870 PRR36Q9H6K5 1346 aa13.77□□□□□ -0.21
CCT3-213ENST00000489870 RALGAPBQ86X10 1494 aa13.76□□□□□ -0.21
CCT3-213ENST00000489870 POLR3AO14802 1390 aaPredicted RBP13.76□□□□□ -0.21
CCT3-213ENST00000489870 CDK19Q9BWU1 502 aa13.76□□□□□ -0.21
CCT3-213ENST00000489870 EP400Q96L91 3159 aa13.75□□□□□ -0.21
CCT3-213ENST00000489870 CABLES1Q8TDN4 633 aa13.75□□□□□ -0.21
CCT3-213ENST00000489870 ARHGEF28Q8N1W1 1705 aaKnown RBP13.75□□□□□ -0.21
CCT3-213ENST00000489870 TRPM3Q9HCF6 1732 aaPredicted RBP13.75□□□□□ -0.21
CCT3-213ENST00000489870 ALS2Q96Q42 1657 aa13.75□□□□□ -0.21
CCT3-213ENST00000489870 NBPF8Q3BBV2 869 aa13.74□□□□□ -0.21
CCT3-213ENST00000489870 ZRANB1Q9UGI0 708 aa13.74□□□□□ -0.21
CCT3-213ENST00000489870 ATP7BP35670 1465 aa13.74□□□□□ -0.21
CCT3-213ENST00000489870 SEPT12Q8IYM1 358 aa13.73□□□□□ -0.21
CCT3-213ENST00000489870 BLMP54132 1417 aaPredicted RBP13.73□□□□□ -0.21
CCT3-213ENST00000489870 CENPJQ9HC77 1338 aaPredicted RBP13.72□□□□□ -0.21
CCT3-213ENST00000489870 GLI3P10071 1580 aa13.72□□□□□ -0.21
CCT3-213ENST00000489870 COL14A1Q05707 1796 aaKnown RBP13.72□□□□□ -0.21
CCT3-213ENST00000489870 PAK3O75914 559 aaPredicted RBP13.71□□□□□ -0.21
CCT3-213ENST00000489870 SF3B2Q13435 895 aaKnown RBP13.71□□□□□ -0.21
CCT3-213ENST00000489870 KRT27Q7Z3Y8 459 aa13.71□□□□□ -0.21
CCT3-213ENST00000489870 BTG4Q9NY30 223 aa13.71□□□□□ -0.21
CCT3-213ENST00000489870 ABCA3Q99758 1704 aa13.7□□□□□ -0.22
CCT3-213ENST00000489870 ACEP12821 1306 aa13.7□□□□□ -0.22
CCT3-213ENST00000489870 C11orf95C9JLR9 678 aaPredicted RBP13.7□□□□□ -0.22
CCT3-213ENST00000489870 NBPF1Q3BBV0 1214 aa13.7□□□□□ -0.22
CCT3-213ENST00000489870 NLRP13Q86W25 1043 aa13.7□□□□□ -0.22
CCT3-213ENST00000489870 ZNF692Q9BU19 519 aaPredicted RBP13.7□□□□□ -0.22
CCT3-213ENST00000489870 CCDC9Q9Y3X0 531 aaKnown RBP13.7□□□□□ -0.22
CCT3-213ENST00000489870 PLCH1Q4KWH8 1693 aa13.69□□□□□ -0.22
CCT3-213ENST00000489870 SPATA31A5Q5VU36 1347 aa13.69□□□□□ -0.22
CCT3-213ENST00000489870 SPATA31A7Q8IWB4 1347 aa13.69□□□□□ -0.22
CCT3-213ENST00000489870 L3MBTL2Q969R5 705 aa13.69□□□□□ -0.22
CCT3-213ENST00000489870 PRDM11Q9NQV5 511 aa13.69□□□□□ -0.22
CCT3-213ENST00000489870 SLC24A1O60721 1099 aa13.68□□□□□ -0.22
CCT3-213ENST00000489870 CPDO75976 1380 aa13.68□□□□□ -0.22
CCT3-213ENST00000489870 EVC2Q86UK5 1308 aa13.67□□□□□ -0.22
CCT3-213ENST00000489870 SRPK2P78362 688 aaKnown RBP13.67□□□□□ -0.22
CCT3-213ENST00000489870 ABTB2Q8N961 1025 aa13.67□□□□□ -0.22
CCT3-213ENST00000489870 THRAP3Q9Y2W1 955 aaKnown RBP13.66□□□□□ -0.22
CCT3-213ENST00000489870 CRYBG1Q9Y4K1 1723 aa13.65□□□□□ -0.22
CCT3-213ENST00000489870 BRWD3Q6RI45 1802 aa13.65□□□□□ -0.22
CCT3-213ENST00000489870 BARGINQ6ZT62 677 aa13.65□□□□□ -0.22
CCT3-213ENST00000489870 TOPAZ1Q8N9V7 1692 aa13.65□□□□□ -0.22
CCT3-213ENST00000489870 USP19O94966 1318 aa13.64□□□□□ -0.23
CCT3-213ENST00000489870 SPATA31A1Q5TZJ5 1347 aa13.64□□□□□ -0.23
CCT3-213ENST00000489870 NRAPQ86VF7 1730 aa13.64□□□□□ -0.23
CCT3-213ENST00000489870 BAG6P46379 1132 aa13.64□□□□□ -0.23
CCT3-213ENST00000489870 PUS7Q96PZ0 661 aaKnown RBP13.64□□□□□ -0.23
CCT3-213ENST00000489870 KIAA0232Q92628 1395 aa13.63□□□□□ -0.23
CCT3-213ENST00000489870 SBNO2Q9Y2G9 1366 aa13.63□□□□□ -0.23
CCT3-213ENST00000489870 GCP02774 474 aa13.63□□□□□ -0.23
CCT3-213ENST00000489870 EVA1CP58658 441 aa13.63□□□□□ -0.23
CCT3-213ENST00000489870 FAM98CQ17RN3 349 aaKnown RBP13.63□□□□□ -0.23
CCT3-213ENST00000489870 PPIP5K1Q6PFW1 1433 aa13.63□□□□□ -0.23
CCT3-213ENST00000489870 SRCAPQ6ZRS2 3230 aa13.62□□□□□ -0.23
CCT3-213ENST00000489870 FAM196AQ6ZSG2 479 aa13.62□□□□□ -0.23
CCT3-213ENST00000489870 CABP1Q9NZU7 370 aa13.61□□□□□ -0.23
CCT3-213ENST00000489870 ZC3H6P61129 1189 aaKnown RBP13.6□□□□□ -0.23
CCT3-213ENST00000489870 KCNH5Q8NCM2 988 aa13.6□□□□□ -0.23
CCT3-213ENST00000489870 CABP2Q9NPB3 220 aa13.6□□□□□ -0.23
CCT3-213ENST00000489870 TTC21AQ8NDW8 1320 aa13.6□□□□□ -0.23
CCT3-213ENST00000489870 ROCK2O75116 1388 aaKnown RBP13.59□□□□□ -0.23
CCT3-213ENST00000489870 AATKQ6ZMQ8 1374 aa13.59□□□□□ -0.23
CCT3-213ENST00000489870 DISP2A7MBM2 1401 aa13.59□□□□□ -0.23
CCT3-213ENST00000489870 USP6P35125 1406 aa13.59□□□□□ -0.23
CCT3-213ENST00000489870 A0A0G2JS52 829 aa13.59□□□□□ -0.23
CCT3-213ENST00000489870 MYT1Q01538 1121 aa13.59□□□□□ -0.23
CCT3-213ENST00000489870 TCP11L2Q8N4U5 519 aa13.59□□□□□ -0.23
CCT3-213ENST00000489870 SIN3AQ96ST3 1273 aa13.59□□□□□ -0.23
CCT3-213ENST00000489870 TRPM1Q7Z4N2 1603 aa13.59□□□□□ -0.23
CCT3-213ENST00000489870 PARD3Q8TEW0 1356 aa13.58□□□□□ -0.23
CCT3-213ENST00000489870 SSH2Q76I76 1423 aa13.58□□□□□ -0.24
CCT3-213ENST00000489870 PHRF1Q9P1Y6 1649 aaKnown RBP13.58□□□□□ -0.24
CCT3-213ENST00000489870 PLEKHG5O94827 1062 aa13.58□□□□□ -0.24
CCT3-213ENST00000489870 NLRP6P59044 892 aa13.58□□□□□ -0.24
CCT3-213ENST00000489870 CDCA7Q9BWT1 371 aaPredicted RBP13.58□□□□□ -0.24
CCT3-213ENST00000489870 RNF39Q9H2S5 420 aa13.58□□□□□ -0.24
CCT3-213ENST00000489870 QRICH2Q9H0J4 1663 aa13.58□□□□□ -0.24
CCT3-213ENST00000489870 THSD7AQ9UPZ6 1657 aa13.58□□□□□ -0.24
CCT3-213ENST00000489870 PDE3BQ13370 1112 aa13.57□□□□□ -0.24
CCT3-213ENST00000489870 NEUROD1Q13562 356 aa13.57□□□□□ -0.24
CCT3-213ENST00000489870 CHRNA2Q15822 529 aa13.56□□□□□ -0.24
CCT3-213ENST00000489870 NUTM2GQ5VZR2 741 aa13.55□□□□□ -0.24
CCT3-213ENST00000489870 DEFB132Q7Z7B7 95 aa13.55□□□□□ -0.24
CCT3-213ENST00000489870 STRN4Q9NRL3 753 aa13.55□□□□□ -0.24
CCT3-213ENST00000489870 CAMTA1Q9Y6Y1 1673 aa13.55□□□□□ -0.24
CCT3-213ENST00000489870 RGPD1P0DJD0 1748 aa13.55□□□□□ -0.24
CCT3-213ENST00000489870 CPSF1Q10570 1443 aaKnown RBP13.55□□□□□ -0.24
CCT3-213ENST00000489870 LMO7Q8WWI1 1683 aa13.54□□□□□ -0.24
CCT3-213ENST00000489870 TTC21BQ7Z4L5 1316 aa13.54□□□□□ -0.24
CCT3-213ENST00000489870 SLIT3O75094 1523 aa13.54□□□□□ -0.24
CCT3-213ENST00000489870 NRKQ7Z2Y5 1582 aa13.54□□□□□ -0.24
CCT3-213ENST00000489870 ARHGEF25Q86VW2 580 aa13.53□□□□□ -0.24
CCT3-213ENST00000489870 CARD11Q9BXL7 1154 aa13.53□□□□□ -0.24
CCT3-213ENST00000489870 CRB1P82279 1406 aa13.53□□□□□ -0.24
CCT3-213ENST00000489870 LARP1Q6PKG0 1096 aaKnown RBP13.52□□□□□ -0.25
CCT3-213ENST00000489870 ABCC6O95255 1503 aa13.51□□□□□ -0.25
CCT3-213ENST00000489870 COL5A2P05997 1499 aaPredicted RBP13.51□□□□□ -0.25
CCT3-213ENST00000489870 USP31Q70CQ4 1352 aa13.51□□□□□ -0.25
CCT3-213ENST00000489870 TONSLQ96HA7 1378 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms