RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 SKOR2Q2VWA4 1001 aaPredicted RBP6.01□□□□□ -1.45
SNRNP40-206ENST00000489853 GPR153Q6NV75 609 aa6.01□□□□□ -1.45
SNRNP40-206ENST00000489853 L3MBTL2Q969R5 705 aa6.01□□□□□ -1.45
SNRNP40-206ENST00000489853 FMN1Q68DA7 1419 aa6□□□□□ -1.45
SNRNP40-206ENST00000489853 POLR1AO95602 1720 aaPredicted RBP6□□□□□ -1.45
SNRNP40-206ENST00000489853 ZNF500O60304 480 aaPredicted RBP6□□□□□ -1.45
SNRNP40-206ENST00000489853 PTMSP20962 102 aa6□□□□□ -1.45
SNRNP40-206ENST00000489853 CSPP1Q1MSJ5 1256 aa6□□□□□ -1.45
SNRNP40-206ENST00000489853 FTSJ3Q8IY81 847 aaKnown RBP6□□□□□ -1.45
SNRNP40-206ENST00000489853 TMC2Q8TDI7 906 aa6□□□□□ -1.45
SNRNP40-206ENST00000489853 R3HCC1Q9Y3T6 440 aaKnown RBP6□□□□□ -1.45
SNRNP40-206ENST00000489853 INSRP06213 1382 aa6□□□□□ -1.45
SNRNP40-206ENST00000489853 RAD54L2Q9Y4B4 1467 aa5.99□□□□□ -1.45
SNRNP40-206ENST00000489853 ROCK2O75116 1388 aaKnown RBP5.99□□□□□ -1.45
SNRNP40-206ENST00000489853 GIGYF2Q6Y7W6 1299 aaKnown RBP5.99□□□□□ -1.45
SNRNP40-206ENST00000489853 ANP32BQ92688 251 aaKnown RBP5.99□□□□□ -1.45
SNRNP40-206ENST00000489853 ZSWIM6Q9HCJ5 1215 aa5.99□□□□□ -1.45
SNRNP40-206ENST00000489853 MIA2Q96PC5 1412 aa5.99□□□□□ -1.45
SNRNP40-206ENST00000489853 MYBBP1AQ9BQG0 1328 aaKnown RBP5.99□□□□□ -1.45
SNRNP40-206ENST00000489853 TDRD9Q8NDG6 1382 aaKnown RBP5.99□□□□□ -1.45
SNRNP40-206ENST00000489853 UQCRHLA0A096LP55 91 aa5.99□□□□□ -1.45
SNRNP40-206ENST00000489853 UQCRHP07919 91 aa5.99□□□□□ -1.45
SNRNP40-206ENST00000489853 MAP3K9P80192 1104 aa5.99□□□□□ -1.45
SNRNP40-206ENST00000489853 TBC1D2Q9BYX2 928 aa5.99□□□□□ -1.45
SNRNP40-206ENST00000489853 UPF2Q9HAU5 1272 aaKnown RBP5.99□□□□□ -1.45
SNRNP40-206ENST00000489853 PRDM10Q9NQV6 1147 aa5.99□□□□□ -1.45
SNRNP40-206ENST00000489853 NAIPQ13075 1403 aa5.99□□□□□ -1.45
SNRNP40-206ENST00000489853 PTPN23Q9H3S7 1636 aa5.98□□□□□ -1.45
SNRNP40-206ENST00000489853 MCM5P33992 734 aa5.98□□□□□ -1.45
SNRNP40-206ENST00000489853 FLIIQ13045 1269 aa5.98□□□□□ -1.45
SNRNP40-206ENST00000489853 NBPF8Q3BBV2 869 aa5.98□□□□□ -1.45
SNRNP40-206ENST00000489853 ZNF687Q8N1G0 1237 aa5.98□□□□□ -1.45
SNRNP40-206ENST00000489853 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.98□□□□□ -1.45
SNRNP40-206ENST00000489853 CDCA7LQ96GN5 454 aa5.98□□□□□ -1.45
SNRNP40-206ENST00000489853 POM121Q96HA1 1249 aa5.98□□□□□ -1.45
SNRNP40-206ENST00000489853 NOL7Q9UMY1 257 aaKnown RBP5.98□□□□□ -1.45
SNRNP40-206ENST00000489853 CLASP1Q7Z460 1538 aa5.98□□□□□ -1.45
SNRNP40-206ENST00000489853 MAPK8IP3Q9UPT6 1336 aa5.98□□□□□ -1.45
SNRNP40-206ENST00000489853 POLA1P09884 1462 aaPredicted RBP5.98□□□□□ -1.45
SNRNP40-206ENST00000489853 TOP2BQ02880 1626 aa5.98□□□□□ -1.45
SNRNP40-206ENST00000489853 KIF15Q9NS87 1388 aa5.98□□□□□ -1.45
SNRNP40-206ENST00000489853 SENP3-EIF4A1A0A087X0R7 540 aa5.97□□□□□ -1.45
SNRNP40-206ENST00000489853 C20orf194Q5TEA3 1177 aa5.97□□□□□ -1.45
SNRNP40-206ENST00000489853 SASS6Q6UVJ0 657 aa5.97□□□□□ -1.45
SNRNP40-206ENST00000489853 GAS2L3Q86XJ1 694 aa5.97□□□□□ -1.45
SNRNP40-206ENST00000489853 ZNF830Q96NB3 372 aaPredicted RBP5.97□□□□□ -1.45
SNRNP40-206ENST00000489853 TBC1D32Q96NH3 1257 aa5.97□□□□□ -1.45
SNRNP40-206ENST00000489853 PRDM2Q13029 1718 aa5.97□□□□□ -1.45
SNRNP40-206ENST00000489853 HIC1Q14526 733 aa5.97□□□□□ -1.45
SNRNP40-206ENST00000489853 MCM6Q14566 821 aa5.97□□□□□ -1.45
SNRNP40-206ENST00000489853 ARSIQ5FYB1 569 aa5.97□□□□□ -1.45
SNRNP40-206ENST00000489853 KHSRPQ92945 711 aaKnown RBP eCLIP5.97□□□□□ -1.45
SNRNP40-206ENST00000489853 ZNF777Q9ULD5 760 aaPredicted RBP5.97□□□□□ -1.45
SNRNP40-206ENST00000489853 DNMBPQ6XZF7 1577 aa5.96□□□□□ -1.45
SNRNP40-206ENST00000489853 CCDC144AA2RUR9 1427 aa5.96□□□□□ -1.46
SNRNP40-206ENST00000489853 FCHSD2O94868 740 aa5.96□□□□□ -1.46
SNRNP40-206ENST00000489853 NLRP7Q8WX94 980 aa5.96□□□□□ -1.46
SNRNP40-206ENST00000489853 RNF166Q96A37 237 aaPredicted RBP5.96□□□□□ -1.46
SNRNP40-206ENST00000489853 ZMYM3Q14202 1370 aa5.96□□□□□ -1.46
SNRNP40-206ENST00000489853 FGD6Q6ZV73 1430 aa5.96□□□□□ -1.46
SNRNP40-206ENST00000489853 SCAPERQ9BY12 1400 aa5.96□□□□□ -1.46
SNRNP40-206ENST00000489853 KIF3CO14782 793 aa5.95□□□□□ -1.46
SNRNP40-206ENST00000489853 NASPP49321 788 aaPredicted RBP5.95□□□□□ -1.46
SNRNP40-206ENST00000489853 PTGDRQ13258 359 aa5.95□□□□□ -1.46
SNRNP40-206ENST00000489853 PHOX2BQ99453 314 aa5.95□□□□□ -1.46
SNRNP40-206ENST00000489853 CDHR5Q9HBB8 845 aa5.95□□□□□ -1.46
SNRNP40-206ENST00000489853 ZMYM4Q5VZL5 1548 aa5.95□□□□□ -1.46
SNRNP40-206ENST00000489853 PTPRKQ15262 1439 aa5.95□□□□□ -1.46
SNRNP40-206ENST00000489853 NLRP13Q86W25 1043 aa5.95□□□□□ -1.46
SNRNP40-206ENST00000489853 TEX2Q8IWB9 1127 aa5.95□□□□□ -1.46
SNRNP40-206ENST00000489853 ERCC6L2Q5T890 1561 aa5.95□□□□□ -1.46
SNRNP40-206ENST00000489853 VIRMAQ69YN4 1812 aaKnown RBP5.95□□□□□ -1.46
SNRNP40-206ENST00000489853 CFAP43Q8NDM7 1665 aa5.94□□□□□ -1.46
SNRNP40-206ENST00000489853 KIF27Q86VH2 1401 aa5.94□□□□□ -1.46
SNRNP40-206ENST00000489853 PLEKHH2Q8IVE3 1493 aa5.94□□□□□ -1.46
SNRNP40-206ENST00000489853 NLRP1Q9C000 1473 aa5.94□□□□□ -1.46
SNRNP40-206ENST00000489853 PCMTD1Q96MG8 357 aaPredicted RBP5.94□□□□□ -1.46
SNRNP40-206ENST00000489853 GBP4Q96PP9 640 aa5.94□□□□□ -1.46
SNRNP40-206ENST00000489853 MPHOSPH9Q99550 1183 aa5.94□□□□□ -1.46
SNRNP40-206ENST00000489853 IBTKQ9P2D0 1353 aaPredicted RBP5.94□□□□□ -1.46
SNRNP40-206ENST00000489853 SNAPC4Q5SXM2 1469 aa5.94□□□□□ -1.46
SNRNP40-206ENST00000489853 A6NJR5 290 aa5.93□□□□□ -1.46
SNRNP40-206ENST00000489853 RBM25P49756 843 aaKnown RBP5.93□□□□□ -1.46
SNRNP40-206ENST00000489853 SLC20A2Q08357 652 aa5.93□□□□□ -1.46
SNRNP40-206ENST00000489853 DNTTIP2Q5QJE6 756 aaKnown RBP5.93□□□□□ -1.46
SNRNP40-206ENST00000489853 PROCA1Q8NCQ7 364 aaPredicted RBP5.93□□□□□ -1.46
SNRNP40-206ENST00000489853 OXER1Q8TDS5 423 aa5.93□□□□□ -1.46
SNRNP40-206ENST00000489853 EIF3AQ14152 1382 aaKnown RBP5.93□□□□□ -1.46
SNRNP40-206ENST00000489853 CDK11BP21127 795 aaKnown RBP5.93□□□□□ -1.46
SNRNP40-206ENST00000489853 DDIT3P35638 169 aa5.93□□□□□ -1.46
SNRNP40-206ENST00000489853 MDM2Q00987 491 aaPredicted RBP5.93□□□□□ -1.46
SNRNP40-206ENST00000489853 MYRIPQ8NFW9 859 aa5.93□□□□□ -1.46
SNRNP40-206ENST00000489853 GOPCQ9HD26 462 aa5.93□□□□□ -1.46
SNRNP40-206ENST00000489853 ZKSCAN5Q9Y2L8 839 aa5.93□□□□□ -1.46
SNRNP40-206ENST00000489853 DENND4BO75064 1496 aaPredicted RBP5.93□□□□□ -1.46
SNRNP40-206ENST00000489853 BIVM-ERCC5R4GMW8 1640 aa5.92□□□□□ -1.46
SNRNP40-206ENST00000489853 VGLL3A8MV65 326 aa5.92□□□□□ -1.46
SNRNP40-206ENST00000489853 CBX1P83916 185 aa5.92□□□□□ -1.46
SNRNP40-206ENST00000489853 XPCQ01831 940 aaPredicted RBP5.92□□□□□ -1.46
SNRNP40-206ENST00000489853 PDLIM2Q96JY6 352 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms