RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 TRPM3Q9HCF6 1732 aaPredicted RBP26.99■■□□□ 1.91
EPHB4-207ENST00000489808 RBM6P78332 1123 aaKnown RBP26.99■■□□□ 1.91
EPHB4-207ENST00000489808 TESK2Q96S53 571 aa26.99■■□□□ 1.91
EPHB4-207ENST00000489808 TRPC5Q9UL62 973 aaPredicted RBP26.99■■□□□ 1.91
EPHB4-207ENST00000489808 TOPAZ1Q8N9V7 1692 aa26.98■■□□□ 1.91
EPHB4-207ENST00000489808 ZNF692Q9BU19 519 aaPredicted RBP26.98■■□□□ 1.91
EPHB4-207ENST00000489808 ATAD2Q6PL18 1390 aa26.97■■□□□ 1.91
EPHB4-207ENST00000489808 FAM83GA6ND36 823 aa26.97■■□□□ 1.91
EPHB4-207ENST00000489808 SLC24A1O60721 1099 aa26.97■■□□□ 1.91
EPHB4-207ENST00000489808 NUTM2GQ5VZR2 741 aa26.97■■□□□ 1.91
EPHB4-207ENST00000489808 ABTB2Q8N961 1025 aa26.97■■□□□ 1.91
EPHB4-207ENST00000489808 PUS7Q96PZ0 661 aaKnown RBP26.96■■□□□ 1.91
EPHB4-207ENST00000489808 BRD4O60885 1362 aaPredicted RBP26.96■■□□□ 1.91
EPHB4-207ENST00000489808 BCL9LQ86UU0 1499 aa26.95■■□□□ 1.91
EPHB4-207ENST00000489808 UNC5CLQ8IV45 518 aa26.95■■□□□ 1.9
EPHB4-207ENST00000489808 ALS2Q96Q42 1657 aa26.94■■□□□ 1.9
EPHB4-207ENST00000489808 SLIT2O94813 1529 aa26.92■■□□□ 1.9
EPHB4-207ENST00000489808 USP6P35125 1406 aa26.91■■□□□ 1.9
EPHB4-207ENST00000489808 USP47Q96K76 1375 aa26.91■■□□□ 1.9
EPHB4-207ENST00000489808 ATRNO75882 1429 aa26.9■■□□□ 1.9
EPHB4-207ENST00000489808 NLRP13Q86W25 1043 aa26.9■■□□□ 1.9
EPHB4-207ENST00000489808 TMC1Q8TDI8 760 aa26.89■■□□□ 1.9
EPHB4-207ENST00000489808 SLC12A5Q9H2X9 1139 aa26.89■■□□□ 1.9
EPHB4-207ENST00000489808 SSH2Q76I76 1423 aa26.89■■□□□ 1.89
EPHB4-207ENST00000489808 GJD4Q96KN9 370 aaPredicted RBP26.88■■□□□ 1.89
EPHB4-207ENST00000489808 CPSF1Q10570 1443 aaKnown RBP26.87■■□□□ 1.89
EPHB4-207ENST00000489808 TTC21BQ7Z4L5 1316 aa26.87■■□□□ 1.89
EPHB4-207ENST00000489808 CDK12Q9NYV4 1490 aaPredicted RBP26.87■■□□□ 1.89
EPHB4-207ENST00000489808 NLRP6P59044 892 aa26.85■■□□□ 1.89
EPHB4-207ENST00000489808 ZC3H6P61129 1189 aaKnown RBP26.85■■□□□ 1.89
EPHB4-207ENST00000489808 PRDM11Q9NQV5 511 aa26.85■■□□□ 1.89
EPHB4-207ENST00000489808 USP19O94966 1318 aa26.85■■□□□ 1.89
EPHB4-207ENST00000489808 MARF1Q9Y4F3 1742 aaKnown RBP26.85■■□□□ 1.89
EPHB4-207ENST00000489808 GCP02774 474 aa26.84■■□□□ 1.89
EPHB4-207ENST00000489808 TMF1P82094 1093 aa26.84■■□□□ 1.89
EPHB4-207ENST00000489808 BTG4Q9NY30 223 aa26.84■■□□□ 1.89
EPHB4-207ENST00000489808 KTN1Q86UP2 1357 aaKnown RBP26.84■■□□□ 1.89
EPHB4-207ENST00000489808 VPS72Q15906 364 aa26.83■■□□□ 1.89
EPHB4-207ENST00000489808 KIAA0232Q92628 1395 aa26.82■■□□□ 1.88
EPHB4-207ENST00000489808 HDGFL2Q7Z4V5 671 aaPredicted RBP26.81■■□□□ 1.88
EPHB4-207ENST00000489808 TTC21AQ8NDW8 1320 aa26.81■■□□□ 1.88
EPHB4-207ENST00000489808 ABCA3Q99758 1704 aa26.8■■□□□ 1.88
EPHB4-207ENST00000489808 CHRNA2Q15822 529 aa26.8■■□□□ 1.88
EPHB4-207ENST00000489808 TERF2IPQ9NYB0 399 aa26.8■■□□□ 1.88
EPHB4-207ENST00000489808 RGS12O14924 1447 aa26.79■■□□□ 1.88
EPHB4-207ENST00000489808 CD163L1Q9NR16 1453 aa26.77■■□□□ 1.88
EPHB4-207ENST00000489808 CDCA8Q53HL2 280 aa26.77■■□□□ 1.88
EPHB4-207ENST00000489808 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.77■■□□□ 1.88
EPHB4-207ENST00000489808 CCDC9Q9Y3X0 531 aaKnown RBP26.77■■□□□ 1.88
EPHB4-207ENST00000489808 CPDO75976 1380 aa26.75■■□□□ 1.87
EPHB4-207ENST00000489808 NINLQ9Y2I6 1382 aa26.75■■□□□ 1.87
EPHB4-207ENST00000489808 CRYBG1Q9Y4K1 1723 aa26.75■■□□□ 1.87
EPHB4-207ENST00000489808 ONECUT3O60422 494 aaPredicted RBP26.73■■□□□ 1.87
EPHB4-207ENST00000489808 EIF4G2P78344 907 aaKnown RBP eCLIP26.73■■□□□ 1.87
EPHB4-207ENST00000489808 A0A1W2PP64 1363 aa26.72■■□□□ 1.87
EPHB4-207ENST00000489808 COL14A1Q05707 1796 aaKnown RBP26.71■■□□□ 1.87
EPHB4-207ENST00000489808 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.71■■□□□ 1.87
EPHB4-207ENST00000489808 KCNH5Q8NCM2 988 aa26.71■■□□□ 1.87
EPHB4-207ENST00000489808 ZRANB1Q9UGI0 708 aa26.71■■□□□ 1.87
EPHB4-207ENST00000489808 NWD2Q9ULI1 1742 aa26.7■■□□□ 1.87
EPHB4-207ENST00000489808 EVA1CP58658 441 aa26.7■■□□□ 1.86
EPHB4-207ENST00000489808 NME9Q86XW9 330 aa26.7■■□□□ 1.86
EPHB4-207ENST00000489808 UPF1Q92900 1129 aaKnown RBP eCLIP26.7■■□□□ 1.86
EPHB4-207ENST00000489808 PHRF1Q9P1Y6 1649 aaKnown RBP26.69■■□□□ 1.86
EPHB4-207ENST00000489808 AKAP12Q02952 1782 aa26.69■■□□□ 1.86
EPHB4-207ENST00000489808 HSPA5P11021 654 aaKnown RBP26.69■■□□□ 1.86
EPHB4-207ENST00000489808 STRN4Q9NRL3 753 aa26.69■■□□□ 1.86
EPHB4-207ENST00000489808 USP31Q70CQ4 1352 aa26.69■■□□□ 1.86
EPHB4-207ENST00000489808 SPATA31A5Q5VU36 1347 aa26.68■■□□□ 1.86
EPHB4-207ENST00000489808 SPATA31A7Q8IWB4 1347 aa26.68■■□□□ 1.86
EPHB4-207ENST00000489808 EDC4Q6P2E9 1401 aaKnown RBP26.68■■□□□ 1.86
EPHB4-207ENST00000489808 SEPT12Q8IYM1 358 aa26.68■■□□□ 1.86
EPHB4-207ENST00000489808 PLCH1Q4KWH8 1693 aa26.68■■□□□ 1.86
EPHB4-207ENST00000489808 GLI3P10071 1580 aa26.67■■□□□ 1.86
EPHB4-207ENST00000489808 NRKQ7Z2Y5 1582 aa26.67■■□□□ 1.86
EPHB4-207ENST00000489808 SLIT3O75094 1523 aa26.66■■□□□ 1.86
EPHB4-207ENST00000489808 ZBTB7CA1YPR0 619 aa26.66■■□□□ 1.86
EPHB4-207ENST00000489808 SOX12O15370 315 aa26.66■■□□□ 1.86
EPHB4-207ENST00000489808 ARHGEF25Q86VW2 580 aa26.66■■□□□ 1.86
EPHB4-207ENST00000489808 PIK3C2AO00443 1686 aa26.66■■□□□ 1.86
EPHB4-207ENST00000489808 FAM98CQ17RN3 349 aaKnown RBP26.65■■□□□ 1.86
EPHB4-207ENST00000489808 AATKQ6ZMQ8 1374 aa26.64■■□□□ 1.86
EPHB4-207ENST00000489808 ANKRD36BQ8N2N9 1353 aa26.64■■□□□ 1.86
EPHB4-207ENST00000489808 CAMTA1Q9Y6Y1 1673 aa26.63■■□□□ 1.85
EPHB4-207ENST00000489808 SPATA31A1Q5TZJ5 1347 aa26.63■■□□□ 1.85
EPHB4-207ENST00000489808 LARP1Q6PKG0 1096 aaKnown RBP26.62■■□□□ 1.85
EPHB4-207ENST00000489808 MON2Q7Z3U7 1717 aa26.62■■□□□ 1.85
EPHB4-207ENST00000489808 AXIN2Q9Y2T1 843 aa26.61■■□□□ 1.85
EPHB4-207ENST00000489808 NRAPQ86VF7 1730 aa26.61■■□□□ 1.85
EPHB4-207ENST00000489808 A0A0G2JS52 829 aa26.58■■□□□ 1.85
EPHB4-207ENST00000489808 MYT1Q01538 1121 aa26.58■■□□□ 1.85
EPHB4-207ENST00000489808 USP35Q9P2H5 1018 aa26.57■■□□□ 1.84
EPHB4-207ENST00000489808 KRT27Q7Z3Y8 459 aa26.56■■□□□ 1.84
EPHB4-207ENST00000489808 FYB1O15117 783 aa26.55■■□□□ 1.84
EPHB4-207ENST00000489808 TCP11L2Q8N4U5 519 aa26.55■■□□□ 1.84
EPHB4-207ENST00000489808 COG3Q96JB2 828 aa26.55■■□□□ 1.84
EPHB4-207ENST00000489808 POLR3GLQ9BT43 218 aa26.55■■□□□ 1.84
EPHB4-207ENST00000489808 CARD14Q9BXL6 1004 aa26.55■■□□□ 1.84
EPHB4-207ENST00000489808 LMO7Q8WWI1 1683 aa26.54■■□□□ 1.84
EPHB4-207ENST00000489808 BARGINQ6ZT62 677 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms