RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 CCDC184Q52MB2 194 aa13.02□□□□□ -0.33
NOD1-208ENST00000489614 NSD3Q9BZ95 1437 aa13.01□□□□□ -0.33
NOD1-208ENST00000489614 MAP2P11137 1827 aaKnown RBP13.01□□□□□ -0.33
NOD1-208ENST00000489614 PHRF1Q9P1Y6 1649 aaKnown RBP13□□□□□ -0.33
NOD1-208ENST00000489614 ADGRL3Q9HAR2 1447 aa13□□□□□ -0.33
NOD1-208ENST00000489614 NCOA3Q9Y6Q9 1424 aa13□□□□□ -0.33
NOD1-208ENST00000489614 STK26Q9P289 416 aa13□□□□□ -0.33
NOD1-208ENST00000489614 COL3A1P02461 1466 aaPredicted RBP13□□□□□ -0.33
NOD1-208ENST00000489614 MYBBP1AQ9BQG0 1328 aaKnown RBP13□□□□□ -0.33
NOD1-208ENST00000489614 PRR36Q9H6K5 1346 aa13□□□□□ -0.33
NOD1-208ENST00000489614 WASLO00401 505 aaPredicted RBP13□□□□□ -0.33
NOD1-208ENST00000489614 SMG6Q86US8 1419 aaKnown RBP12.99□□□□□ -0.33
NOD1-208ENST00000489614 CDK19Q9BWU1 502 aa12.99□□□□□ -0.33
NOD1-208ENST00000489614 SENP3Q9H4L4 574 aaPredicted RBP12.99□□□□□ -0.33
NOD1-208ENST00000489614 HNRNPUQ00839 825 aaKnown RBP eCLIP12.99□□□□□ -0.33
NOD1-208ENST00000489614 POLR3AO14802 1390 aaPredicted RBP12.98□□□□□ -0.33
NOD1-208ENST00000489614 SLC26A8Q96RN1 970 aa12.98□□□□□ -0.33
NOD1-208ENST00000489614 AMOTL2Q9Y2J4 779 aa12.98□□□□□ -0.33
NOD1-208ENST00000489614 ALS2Q96Q42 1657 aa12.98□□□□□ -0.33
NOD1-208ENST00000489614 PPIP5K1Q6PFW1 1433 aa12.98□□□□□ -0.33
NOD1-208ENST00000489614 RGPD1P0DJD0 1748 aa12.98□□□□□ -0.33
NOD1-208ENST00000489614 MINK1Q8N4C8 1332 aaPredicted RBP12.98□□□□□ -0.33
NOD1-208ENST00000489614 BLMP54132 1417 aaPredicted RBP12.97□□□□□ -0.33
NOD1-208ENST00000489614 EDC4Q6P2E9 1401 aaKnown RBP12.97□□□□□ -0.33
NOD1-208ENST00000489614 CABP2Q9NPB3 220 aa12.97□□□□□ -0.33
NOD1-208ENST00000489614 FGD1P98174 961 aa12.97□□□□□ -0.33
NOD1-208ENST00000489614 SLC12A5Q9H2X9 1139 aa12.97□□□□□ -0.33
NOD1-208ENST00000489614 PEAK1Q9H792 1746 aa12.96□□□□□ -0.33
NOD1-208ENST00000489614 MST1RQ04912 1400 aa12.96□□□□□ -0.33
NOD1-208ENST00000489614 NCKAP5LQ9HCH0 1330 aa12.96□□□□□ -0.34
NOD1-208ENST00000489614 DCCP43146 1447 aa12.95□□□□□ -0.34
NOD1-208ENST00000489614 HSP90AA2PQ14568 343 aaPredicted RBP12.95□□□□□ -0.34
NOD1-208ENST00000489614 KCNA6P17658 529 aa12.95□□□□□ -0.34
NOD1-208ENST00000489614 GSE1Q14687 1217 aa12.95□□□□□ -0.34
NOD1-208ENST00000489614 POGKQ9P215 609 aa12.95□□□□□ -0.34
NOD1-208ENST00000489614 AAMPQ13685 434 aa12.94□□□□□ -0.34
NOD1-208ENST00000489614 PLEKHG3A1L390 1219 aa12.94□□□□□ -0.34
NOD1-208ENST00000489614 OVOS2A0A0J9YW53 1432 aa12.93□□□□□ -0.34
NOD1-208ENST00000489614 OVOS2Q6IE36 1432 aa12.93□□□□□ -0.34
NOD1-208ENST00000489614 BCL11BQ9C0K0 894 aaPredicted RBP12.93□□□□□ -0.34
NOD1-208ENST00000489614 USP6P35125 1406 aa12.93□□□□□ -0.34
NOD1-208ENST00000489614 PNISRQ8TF01 805 aaKnown RBP12.92□□□□□ -0.34
NOD1-208ENST00000489614 LTN1O94822 1766 aa12.91□□□□□ -0.34
NOD1-208ENST00000489614 PPP2R1AP30153 589 aa12.91□□□□□ -0.34
NOD1-208ENST00000489614 SAFB2Q14151 953 aaKnown RBP eCLIP12.91□□□□□ -0.34
NOD1-208ENST00000489614 NLRP13Q86W25 1043 aa12.91□□□□□ -0.34
NOD1-208ENST00000489614 FRAT1Q92837 279 aaPredicted RBP12.91□□□□□ -0.34
NOD1-208ENST00000489614 USP35Q9P2H5 1018 aa12.91□□□□□ -0.34
NOD1-208ENST00000489614 NHSL1Q5SYE7 1610 aa12.91□□□□□ -0.34
NOD1-208ENST00000489614 NUDT16Q96DE0 195 aaKnown RBP12.9□□□□□ -0.34
NOD1-208ENST00000489614 ABCA3Q99758 1704 aa12.9□□□□□ -0.34
NOD1-208ENST00000489614 POLR3GLQ9BT43 218 aa12.9□□□□□ -0.34
NOD1-208ENST00000489614 KNSTRNQ9Y448 316 aa12.9□□□□□ -0.34
NOD1-208ENST00000489614 LTBP4Q8N2S1 1624 aa12.89□□□□□ -0.35
NOD1-208ENST00000489614 IQSEC2Q5JU85 1478 aa12.89□□□□□ -0.35
NOD1-208ENST00000489614 PNPLA6Q8IY17 1366 aa12.89□□□□□ -0.35
NOD1-208ENST00000489614 CGNL1Q0VF96 1302 aa12.89□□□□□ -0.35
NOD1-208ENST00000489614 CAMTA1Q9Y6Y1 1673 aa12.89□□□□□ -0.35
NOD1-208ENST00000489614 USP31Q70CQ4 1352 aa12.88□□□□□ -0.35
NOD1-208ENST00000489614 CABP1Q9NZU7 370 aa12.88□□□□□ -0.35
NOD1-208ENST00000489614 SRPK2P78362 688 aaKnown RBP12.88□□□□□ -0.35
NOD1-208ENST00000489614 FAM43AQ8N2R8 423 aa12.88□□□□□ -0.35
NOD1-208ENST00000489614 NAP1L5Q96NT1 182 aaPredicted RBP12.88□□□□□ -0.35
NOD1-208ENST00000489614 CCDC61Q9Y6R9 512 aa12.88□□□□□ -0.35
NOD1-208ENST00000489614 SLIT3O75094 1523 aa12.88□□□□□ -0.35
NOD1-208ENST00000489614 AATKQ6ZMQ8 1374 aa12.87□□□□□ -0.35
NOD1-208ENST00000489614 PDIA4P13667 645 aaKnown RBP12.87□□□□□ -0.35
NOD1-208ENST00000489614 MED1Q15648 1581 aaPredicted RBP12.87□□□□□ -0.35
NOD1-208ENST00000489614 NFAT5O94916 1531 aa12.87□□□□□ -0.35
NOD1-208ENST00000489614 CDK12Q9NYV4 1490 aaPredicted RBP12.86□□□□□ -0.35
NOD1-208ENST00000489614 FYB1O15117 783 aa12.86□□□□□ -0.35
NOD1-208ENST00000489614 CC2D1BQ5T0F9 858 aaKnown RBP12.86□□□□□ -0.35
NOD1-208ENST00000489614 TERF2IPQ9NYB0 399 aa12.86□□□□□ -0.35
NOD1-208ENST00000489614 C1orf167Q5SNV9 1468 aa12.85□□□□□ -0.35
NOD1-208ENST00000489614 MRS2Q9HD23 443 aa12.84□□□□□ -0.35
NOD1-208ENST00000489614 COL18A1P39060 1754 aa12.84□□□□□ -0.35
NOD1-208ENST00000489614 DLG5Q8TDM6 1919 aa12.84□□□□□ -0.35
NOD1-208ENST00000489614 LMO7Q8WWI1 1683 aa12.83□□□□□ -0.36
NOD1-208ENST00000489614 PPM1GO15355 546 aaPredicted RBP12.83□□□□□ -0.36
NOD1-208ENST00000489614 HSP90AA1P07900 732 aaKnown RBP12.83□□□□□ -0.36
NOD1-208ENST00000489614 TMC1Q8TDI8 760 aa12.82□□□□□ -0.36
NOD1-208ENST00000489614 ZNF692Q9BU19 519 aaPredicted RBP12.82□□□□□ -0.36
NOD1-208ENST00000489614 PHF23Q9BUL5 403 aaPredicted RBP12.82□□□□□ -0.36
NOD1-208ENST00000489614 PXDNQ92626 1479 aa12.82□□□□□ -0.36
NOD1-208ENST00000489614 ACEP12821 1306 aa12.82□□□□□ -0.36
NOD1-208ENST00000489614 HDGFL2Q7Z4V5 671 aaPredicted RBP12.82□□□□□ -0.36
NOD1-208ENST00000489614 HSPA2P54652 639 aa12.81□□□□□ -0.36
NOD1-208ENST00000489614 ZBED9Q6R2W3 1325 aa12.8□□□□□ -0.36
NOD1-208ENST00000489614 TTC21AQ8NDW8 1320 aa12.8□□□□□ -0.36
NOD1-208ENST00000489614 RRAGDQ9NQL2 400 aaPredicted RBP12.8□□□□□ -0.36
NOD1-208ENST00000489614 ABCC6O95255 1503 aa12.8□□□□□ -0.36
NOD1-208ENST00000489614 RRP9O43818 475 aaKnown RBP12.8□□□□□ -0.36
NOD1-208ENST00000489614 TTC21BQ7Z4L5 1316 aa12.8□□□□□ -0.36
NOD1-208ENST00000489614 TMEM94Q12767 1356 aa12.8□□□□□ -0.36
NOD1-208ENST00000489614 RGPD5Q99666 1765 aa12.79□□□□□ -0.36
NOD1-208ENST00000489614 VIRMAQ69YN4 1812 aaKnown RBP12.79□□□□□ -0.36
NOD1-208ENST00000489614 RGPD2P0DJD1 1756 aa12.79□□□□□ -0.36
NOD1-208ENST00000489614 COL22A1Q8NFW1 1626 aaPredicted RBP12.79□□□□□ -0.36
NOD1-208ENST00000489614 NFKBIBQ15653 356 aa12.78□□□□□ -0.36
NOD1-208ENST00000489614 FAM208AQ9UK61 1670 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms