RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 ANP32AP39687 249 aaKnown RBP19.43■□□□□ 0.7
COL9A1-208ENST00000489611 ERICH6Q7L0X2 663 aa19.43■□□□□ 0.7
COL9A1-208ENST00000489611 TBX22Q9Y458 520 aa19.43■□□□□ 0.7
COL9A1-208ENST00000489611 FAM135BQ49AJ0 1406 aa19.42■□□□□ 0.7
COL9A1-208ENST00000489611 SPINK5Q9NQ38 1064 aaPredicted RBP19.41■□□□□ 0.7
COL9A1-208ENST00000489611 PTPRUQ92729 1446 aa19.41■□□□□ 0.7
COL9A1-208ENST00000489611 FYB1O15117 783 aa19.41■□□□□ 0.7
COL9A1-208ENST00000489611 MYH16Q9H6N6 1097 aa19.41■□□□□ 0.7
COL9A1-208ENST00000489611 TECPR2O15040 1411 aa19.4■□□□□ 0.7
COL9A1-208ENST00000489611 KDM2BQ8NHM5 1336 aa19.4■□□□□ 0.7
COL9A1-208ENST00000489611 MSH5O43196 834 aa19.4■□□□□ 0.7
COL9A1-208ENST00000489611 CT47B1P0C2W7 299 aaPredicted RBP19.4■□□□□ 0.7
COL9A1-208ENST00000489611 COL3A1P02461 1466 aaPredicted RBP19.4■□□□□ 0.7
COL9A1-208ENST00000489611 C20orf194Q5TEA3 1177 aa19.39■□□□□ 0.7
COL9A1-208ENST00000489611 ROBO2Q9HCK4 1378 aa19.39■□□□□ 0.69
COL9A1-208ENST00000489611 U2AF1L5P0DN76 240 aaPredicted RBP19.39■□□□□ 0.69
COL9A1-208ENST00000489611 U2AF1Q01081 240 aaKnown RBP eCLIP19.39■□□□□ 0.69
COL9A1-208ENST00000489611 PNPLA6Q8IY17 1366 aa19.38■□□□□ 0.69
COL9A1-208ENST00000489611 AMOTL2Q9Y2J4 779 aa19.38■□□□□ 0.69
COL9A1-208ENST00000489611 CPS1P31327 1500 aa19.37■□□□□ 0.69
COL9A1-208ENST00000489611 CDC42BPGQ6DT37 1551 aa19.37■□□□□ 0.69
COL9A1-208ENST00000489611 NCKAP5LQ9HCH0 1330 aa19.36■□□□□ 0.69
COL9A1-208ENST00000489611 GGNBP2Q9H3C7 697 aa19.35■□□□□ 0.69
COL9A1-208ENST00000489611 CABP1Q9NZU7 370 aa19.35■□□□□ 0.69
COL9A1-208ENST00000489611 EDC4Q6P2E9 1401 aaKnown RBP19.34■□□□□ 0.69
COL9A1-208ENST00000489611 BACH2Q9BYV9 841 aa19.34■□□□□ 0.69
COL9A1-208ENST00000489611 DMRT2Q9Y5R5 561 aa19.34■□□□□ 0.69
COL9A1-208ENST00000489611 DIP2AQ14689 1571 aa19.34■□□□□ 0.69
COL9A1-208ENST00000489611 IL16Q14005 1332 aa19.34■□□□□ 0.69
COL9A1-208ENST00000489611 PDE4AP27815 886 aa19.33■□□□□ 0.69
COL9A1-208ENST00000489611 CPSF1Q10570 1443 aaKnown RBP19.33■□□□□ 0.69
COL9A1-208ENST00000489611 MAPK8IP3Q9UPT6 1336 aa19.33■□□□□ 0.69
COL9A1-208ENST00000489611 WASLO00401 505 aaPredicted RBP19.33■□□□□ 0.68
COL9A1-208ENST00000489611 BCAR3O75815 825 aa19.33■□□□□ 0.68
COL9A1-208ENST00000489611 IPO9Q96P70 1041 aaKnown RBP19.33■□□□□ 0.68
COL9A1-208ENST00000489611 DIAPH1O60610 1272 aaKnown RBP19.32■□□□□ 0.68
COL9A1-208ENST00000489611 CANXP27824 592 aaKnown RBP19.31■□□□□ 0.68
COL9A1-208ENST00000489611 PLEKHF1Q96S99 279 aa19.31■□□□□ 0.68
COL9A1-208ENST00000489611 NPHP4O75161 1426 aaPredicted RBP19.31■□□□□ 0.68
COL9A1-208ENST00000489611 KCNA6P17658 529 aa19.31■□□□□ 0.68
COL9A1-208ENST00000489611 RARSP54136 660 aaKnown RBP19.31■□□□□ 0.68
COL9A1-208ENST00000489611 NEUROD2Q15784 382 aa19.31■□□□□ 0.68
COL9A1-208ENST00000489611 HSPA2P54652 639 aa19.3■□□□□ 0.68
COL9A1-208ENST00000489611 FCHSD2O94868 740 aa19.29■□□□□ 0.68
COL9A1-208ENST00000489611 NOP58Q9Y2X3 529 aaKnown RBP19.29■□□□□ 0.68
COL9A1-208ENST00000489611 MON2Q7Z3U7 1717 aa19.29■□□□□ 0.68
COL9A1-208ENST00000489611 RRP7AQ9Y3A4 280 aaKnown RBP19.29■□□□□ 0.68
COL9A1-208ENST00000489611 PPIP5K1Q6PFW1 1433 aa19.28■□□□□ 0.68
COL9A1-208ENST00000489611 U2SURPO15042 1029 aaKnown RBP19.28■□□□□ 0.68
COL9A1-208ENST00000489611 AATKQ6ZMQ8 1374 aa19.28■□□□□ 0.68
COL9A1-208ENST00000489611 PIK3R4Q99570 1358 aa19.28■□□□□ 0.68
COL9A1-208ENST00000489611 NEFMP07197 916 aa19.27■□□□□ 0.68
COL9A1-208ENST00000489611 TMPOP42166 694 aaKnown RBP19.27■□□□□ 0.68
COL9A1-208ENST00000489611 ZNF692Q9BU19 519 aaPredicted RBP19.27■□□□□ 0.68
COL9A1-208ENST00000489611 PTCH1Q13635 1447 aa19.27■□□□□ 0.68
COL9A1-208ENST00000489611 ITSN1Q15811 1721 aa19.27■□□□□ 0.68
COL9A1-208ENST00000489611 AKAP12Q02952 1782 aa19.27■□□□□ 0.68
COL9A1-208ENST00000489611 CCDC61Q9Y6R9 512 aa19.27■□□□□ 0.67
COL9A1-208ENST00000489611 CLUAP1Q96AJ1 413 aa19.25■□□□□ 0.67
COL9A1-208ENST00000489611 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.25■□□□□ 0.67
COL9A1-208ENST00000489611 MAP2P11137 1827 aaKnown RBP19.25■□□□□ 0.67
COL9A1-208ENST00000489611 XRN1Q8IZH2 1706 aaKnown RBP19.25■□□□□ 0.67
COL9A1-208ENST00000489611 CDK12Q9NYV4 1490 aaPredicted RBP19.25■□□□□ 0.67
COL9A1-208ENST00000489611 ZBTB47Q9UFB7 747 aaPredicted RBP19.23■□□□□ 0.67
COL9A1-208ENST00000489611 NUTM2FA1L443 756 aa19.23■□□□□ 0.67
COL9A1-208ENST00000489611 PMFBP1Q8TBY8 1022 aa19.23■□□□□ 0.67
COL9A1-208ENST00000489611 NUDT16Q96DE0 195 aaKnown RBP19.23■□□□□ 0.67
COL9A1-208ENST00000489611 RBM33Q96EV2 1170 aaKnown RBP19.23■□□□□ 0.67
COL9A1-208ENST00000489611 CALD1Q05682 793 aaKnown RBP19.22■□□□□ 0.67
COL9A1-208ENST00000489611 POLKQ9UBT6 870 aa19.22■□□□□ 0.67
COL9A1-208ENST00000489611 PRR36Q9H6K5 1346 aa19.22■□□□□ 0.67
COL9A1-208ENST00000489611 ZNF428Q96B54 188 aa19.21■□□□□ 0.67
COL9A1-208ENST00000489611 TRIM35Q9UPQ4 493 aa19.21■□□□□ 0.67
COL9A1-208ENST00000489611 LMTK3Q96Q04 1460 aa19.2■□□□□ 0.66
COL9A1-208ENST00000489611 FAM161AQ3B820 660 aa19.2■□□□□ 0.66
COL9A1-208ENST00000489611 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.2■□□□□ 0.66
COL9A1-208ENST00000489611 FRAT1Q92837 279 aaPredicted RBP19.2■□□□□ 0.66
COL9A1-208ENST00000489611 LRRC7Q96NW7 1537 aa19.2■□□□□ 0.66
COL9A1-208ENST00000489611 DDRGK1Q96HY6 314 aa19.19■□□□□ 0.66
COL9A1-208ENST00000489611 TOPAZ1Q8N9V7 1692 aa19.19■□□□□ 0.66
COL9A1-208ENST00000489611 RIPK4P57078 832 aa19.19■□□□□ 0.66
COL9A1-208ENST00000489611 COG3Q96JB2 828 aa19.19■□□□□ 0.66
COL9A1-208ENST00000489611 CHD2O14647 1828 aaKnown RBP19.18■□□□□ 0.66
COL9A1-208ENST00000489611 ZKSCAN2Q63HK3 967 aa19.18■□□□□ 0.66
COL9A1-208ENST00000489611 COG6Q9Y2V7 657 aa19.17■□□□□ 0.66
COL9A1-208ENST00000489611 PANK1Q8TE04 598 aa19.17■□□□□ 0.66
COL9A1-208ENST00000489611 RSPH6AQ9H0K4 717 aa19.17■□□□□ 0.66
COL9A1-208ENST00000489611 LMOD3Q0VAK6 560 aa19.15■□□□□ 0.66
COL9A1-208ENST00000489611 VIRMAQ69YN4 1812 aaKnown RBP19.15■□□□□ 0.66
COL9A1-208ENST00000489611 NRKQ7Z2Y5 1582 aa19.15■□□□□ 0.66
COL9A1-208ENST00000489611 KIF16BQ96L93 1317 aa19.15■□□□□ 0.66
COL9A1-208ENST00000489611 ALDH1L2Q3SY69 923 aa19.14■□□□□ 0.65
COL9A1-208ENST00000489611 PLEKHG3A1L390 1219 aa19.13■□□□□ 0.65
COL9A1-208ENST00000489611 IPO8O15397 1037 aaKnown RBP19.13■□□□□ 0.65
COL9A1-208ENST00000489611 MVPQ14764 893 aaKnown RBP19.13■□□□□ 0.65
COL9A1-208ENST00000489611 DZIP1LQ8IYY4 767 aaKnown RBP19.13■□□□□ 0.65
COL9A1-208ENST00000489611 PRKAR2BP31323 418 aa19.13■□□□□ 0.65
COL9A1-208ENST00000489611 EXOSC9Q06265 439 aaKnown RBP19.13■□□□□ 0.65
COL9A1-208ENST00000489611 NFE2L2Q16236 605 aa19.13■□□□□ 0.65
COL9A1-208ENST00000489611 FTSJ3Q8IY81 847 aaKnown RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms