RNA–Protein interactions for RNA: ENST00000489260.1

NUP214-209, Transcript of nucleoporin 214, humanhuman

TSL 3

Gene NUP214, Length 649 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP214-209ENST00000489260 ITSN1Q15811 1721 aa16.54■□□□□ 0.24
NUP214-209ENST00000489260 CENPJQ9HC77 1338 aaPredicted RBP16.54■□□□□ 0.24
NUP214-209ENST00000489260 PRDM11Q9NQV5 511 aa16.54■□□□□ 0.24
NUP214-209ENST00000489260 BTG4Q9NY30 223 aa16.54■□□□□ 0.24
NUP214-209ENST00000489260 ZRANB1Q9UGI0 708 aa16.54■□□□□ 0.24
NUP214-209ENST00000489260 TRPM3Q9HCF6 1732 aaPredicted RBP16.53■□□□□ 0.24
NUP214-209ENST00000489260 SRPK2P78362 688 aaKnown RBP16.53■□□□□ 0.24
NUP214-209ENST00000489260 ABCA3Q99758 1704 aa16.53■□□□□ 0.24
NUP214-209ENST00000489260 BLMP54132 1417 aaPredicted RBP16.53■□□□□ 0.24
NUP214-209ENST00000489260 PLCH1Q4KWH8 1693 aa16.53■□□□□ 0.24
NUP214-209ENST00000489260 ONECUT3O60422 494 aaPredicted RBP16.52■□□□□ 0.24
NUP214-209ENST00000489260 NBPF1Q3BBV0 1214 aa16.52■□□□□ 0.24
NUP214-209ENST00000489260 KRT27Q7Z3Y8 459 aa16.52■□□□□ 0.24
NUP214-209ENST00000489260 ALS2Q96Q42 1657 aa16.52■□□□□ 0.23
NUP214-209ENST00000489260 POLR3AO14802 1390 aaPredicted RBP16.51■□□□□ 0.23
NUP214-209ENST00000489260 PLEKHG3A1L390 1219 aa16.51■□□□□ 0.23
NUP214-209ENST00000489260 COL14A1Q05707 1796 aaKnown RBP16.51■□□□□ 0.23
NUP214-209ENST00000489260 ACEP12821 1306 aa16.5■□□□□ 0.23
NUP214-209ENST00000489260 NBPF8Q3BBV2 869 aa16.5■□□□□ 0.23
NUP214-209ENST00000489260 FAM98CQ17RN3 349 aaKnown RBP16.49■□□□□ 0.23
NUP214-209ENST00000489260 L3MBTL2Q969R5 705 aa16.49■□□□□ 0.23
NUP214-209ENST00000489260 BRD4O60885 1362 aaPredicted RBP16.48■□□□□ 0.23
NUP214-209ENST00000489260 ABTB2Q8N961 1025 aa16.47■□□□□ 0.23
NUP214-209ENST00000489260 KIAA0232Q92628 1395 aa16.47■□□□□ 0.23
NUP214-209ENST00000489260 SPATA31A5Q5VU36 1347 aa16.46■□□□□ 0.23
NUP214-209ENST00000489260 SPATA31A7Q8IWB4 1347 aa16.46■□□□□ 0.23
NUP214-209ENST00000489260 PPIP5K1Q6PFW1 1433 aa16.46■□□□□ 0.23
NUP214-209ENST00000489260 ZC3H6P61129 1189 aaKnown RBP16.45■□□□□ 0.22
NUP214-209ENST00000489260 NEUROD1Q13562 356 aa16.45■□□□□ 0.22
NUP214-209ENST00000489260 NUTM2GQ5VZR2 741 aa16.45■□□□□ 0.22
NUP214-209ENST00000489260 NLRP13Q86W25 1043 aa16.45■□□□□ 0.22
NUP214-209ENST00000489260 TOPAZ1Q8N9V7 1692 aa16.45■□□□□ 0.22
NUP214-209ENST00000489260 EVC2Q86UK5 1308 aa16.45■□□□□ 0.22
NUP214-209ENST00000489260 ROCK2O75116 1388 aaKnown RBP16.44■□□□□ 0.22
NUP214-209ENST00000489260 EP400Q96L91 3159 aa16.44■□□□□ 0.22
NUP214-209ENST00000489260 EVA1CP58658 441 aa16.44■□□□□ 0.22
NUP214-209ENST00000489260 CABP2Q9NPB3 220 aa16.44■□□□□ 0.22
NUP214-209ENST00000489260 NRAPQ86VF7 1730 aa16.44■□□□□ 0.22
NUP214-209ENST00000489260 BAG6P46379 1132 aa16.43■□□□□ 0.22
NUP214-209ENST00000489260 CHRNA2Q15822 529 aa16.43■□□□□ 0.22
NUP214-209ENST00000489260 STRN4Q9NRL3 753 aa16.43■□□□□ 0.22
NUP214-209ENST00000489260 SIN3AQ96ST3 1273 aa16.42■□□□□ 0.22
NUP214-209ENST00000489260 CPDO75976 1380 aa16.41■□□□□ 0.22
NUP214-209ENST00000489260 CRYBG1Q9Y4K1 1723 aa16.41■□□□□ 0.22
NUP214-209ENST00000489260 USP19O94966 1318 aa16.41■□□□□ 0.22
NUP214-209ENST00000489260 SPATA31A1Q5TZJ5 1347 aa16.41■□□□□ 0.22
NUP214-209ENST00000489260 CABP1Q9NZU7 370 aa16.4■□□□□ 0.22
NUP214-209ENST00000489260 PHRF1Q9P1Y6 1649 aaKnown RBP16.4■□□□□ 0.22
NUP214-209ENST00000489260 QRICH2Q9H0J4 1663 aa16.4■□□□□ 0.22
NUP214-209ENST00000489260 GCP02774 474 aa16.39■□□□□ 0.21
NUP214-209ENST00000489260 DEFB132Q7Z7B7 95 aa16.39■□□□□ 0.21
NUP214-209ENST00000489260 USP6P35125 1406 aa16.38■□□□□ 0.21
NUP214-209ENST00000489260 BRWD3Q6RI45 1802 aa16.38■□□□□ 0.21
NUP214-209ENST00000489260 SSH2Q76I76 1423 aa16.37■□□□□ 0.21
NUP214-209ENST00000489260 NLRP6P59044 892 aa16.37■□□□□ 0.21
NUP214-209ENST00000489260 ZNF692Q9BU19 519 aaPredicted RBP16.37■□□□□ 0.21
NUP214-209ENST00000489260 NRKQ7Z2Y5 1582 aa16.37■□□□□ 0.21
NUP214-209ENST00000489260 TRPM1Q7Z4N2 1603 aa16.37■□□□□ 0.21
NUP214-209ENST00000489260 PDE3BQ13370 1112 aa16.36■□□□□ 0.21
NUP214-209ENST00000489260 FAM196AQ6ZSG2 479 aa16.36■□□□□ 0.21
NUP214-209ENST00000489260 BARGINQ6ZT62 677 aa16.36■□□□□ 0.21
NUP214-209ENST00000489260 USP35Q9P2H5 1018 aa16.36■□□□□ 0.21
NUP214-209ENST00000489260 TCP11L2Q8N4U5 519 aa16.35■□□□□ 0.21
NUP214-209ENST00000489260 THRAP3Q9Y2W1 955 aaKnown RBP16.35■□□□□ 0.21
NUP214-209ENST00000489260 TONSLQ96HA7 1378 aa16.35■□□□□ 0.21
NUP214-209ENST00000489260 THSD7AQ9UPZ6 1657 aa16.34■□□□□ 0.21
NUP214-209ENST00000489260 ZBTB7CA1YPR0 619 aa16.34■□□□□ 0.21
NUP214-209ENST00000489260 C11orf95C9JLR9 678 aaPredicted RBP16.33■□□□□ 0.2
NUP214-209ENST00000489260 LARP1Q6PKG0 1096 aaKnown RBP16.33■□□□□ 0.2
NUP214-209ENST00000489260 CARD11Q9BXL7 1154 aa16.33■□□□□ 0.2
NUP214-209ENST00000489260 FAM182BQ5T319 152 aa16.32■□□□□ 0.2
NUP214-209ENST00000489260 AATKQ6ZMQ8 1374 aa16.32■□□□□ 0.2
NUP214-209ENST00000489260 KCNH5Q8NCM2 988 aa16.32■□□□□ 0.2
NUP214-209ENST00000489260 TTC21AQ8NDW8 1320 aa16.32■□□□□ 0.2
NUP214-209ENST00000489260 SBNO2Q9Y2G9 1366 aa16.32■□□□□ 0.2
NUP214-209ENST00000489260 CAMTA1Q9Y6Y1 1673 aa16.31■□□□□ 0.2
NUP214-209ENST00000489260 DISP2A7MBM2 1401 aa16.3■□□□□ 0.2
NUP214-209ENST00000489260 TTC21BQ7Z4L5 1316 aa16.3■□□□□ 0.2
NUP214-209ENST00000489260 RGPD1P0DJD0 1748 aa16.3■□□□□ 0.2
NUP214-209ENST00000489260 SLIT3O75094 1523 aa16.29■□□□□ 0.2
NUP214-209ENST00000489260 COL5A2P05997 1499 aaPredicted RBP16.29■□□□□ 0.2
NUP214-209ENST00000489260 CRB1P82279 1406 aa16.29■□□□□ 0.2
NUP214-209ENST00000489260 KTN1Q86UP2 1357 aaKnown RBP16.29■□□□□ 0.2
NUP214-209ENST00000489260 EN1Q05925 392 aaPredicted RBP16.29■□□□□ 0.2
NUP214-209ENST00000489260 LMO7Q8WWI1 1683 aa16.29■□□□□ 0.2
NUP214-209ENST00000489260 PARD3Q8TEW0 1356 aa16.28■□□□□ 0.2
NUP214-209ENST00000489260 TRIM37O94972 964 aa16.28■□□□□ 0.2
NUP214-209ENST00000489260 SLC24A1O60721 1099 aa16.27■□□□□ 0.2
NUP214-209ENST00000489260 TOM1L2Q6ZVM7 507 aa16.27■□□□□ 0.2
NUP214-209ENST00000489260 APBA3O96018 575 aa16.26■□□□□ 0.19
NUP214-209ENST00000489260 HDGFL2Q7Z4V5 671 aaPredicted RBP16.26■□□□□ 0.19
NUP214-209ENST00000489260 CDCA7Q9BWT1 371 aaPredicted RBP16.26■□□□□ 0.19
NUP214-209ENST00000489260 CPSF1Q10570 1443 aaKnown RBP16.26■□□□□ 0.19
NUP214-209ENST00000489260 CSB-PGBD3P0DP91 1061 aa16.25■□□□□ 0.19
NUP214-209ENST00000489260 TMC1Q8TDI8 760 aa16.25■□□□□ 0.19
NUP214-209ENST00000489260 WDR17Q8IZU2 1322 aa16.24■□□□□ 0.19
NUP214-209ENST00000489260 PSDA5PKW4 1024 aaPredicted RBP16.24■□□□□ 0.19
NUP214-209ENST00000489260 SOX12O15370 315 aa16.24■□□□□ 0.19
NUP214-209ENST00000489260 ARHGEF25Q86VW2 580 aa16.24■□□□□ 0.19
NUP214-209ENST00000489260 TERF2IPQ9NYB0 399 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms