RNA–Protein interactions for RNA: ENST00000488986.1

SNRNP27-205, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 336 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-205ENST00000488986 HRCP23327 699 aa9.53□□□□□ -0.88
SNRNP27-205ENST00000488986 CTHP32929 405 aa9.53□□□□□ -0.88
SNRNP27-205ENST00000488986 CSPP1Q1MSJ5 1256 aa9.52□□□□□ -0.89
SNRNP27-205ENST00000488986 LCE2CQ5TA81 110 aa9.52□□□□□ -0.89
SNRNP27-205ENST00000488986 LYPD8Q6UX82 237 aa9.52□□□□□ -0.89
SNRNP27-205ENST00000488986 TRIM46Q7Z4K8 759 aa9.52□□□□□ -0.89
SNRNP27-205ENST00000488986 CABLES1Q8TDN4 633 aa9.52□□□□□ -0.89
SNRNP27-205ENST00000488986 ZBTB3Q9H5J0 574 aa9.52□□□□□ -0.89
SNRNP27-205ENST00000488986 TERTO14746 1132 aaKnown RBP9.51□□□□□ -0.89
SNRNP27-205ENST00000488986 RIC3Q7Z5B4 369 aa9.51□□□□□ -0.89
SNRNP27-205ENST00000488986 MAP10Q9P2G4 905 aa9.51□□□□□ -0.89
SNRNP27-205ENST00000488986 VARSP26640 1264 aaKnown RBP9.5□□□□□ -0.89
SNRNP27-205ENST00000488986 F12P00748 615 aaPredicted RBP9.48□□□□□ -0.89
SNRNP27-205ENST00000488986 PDE4DQ08499 809 aa9.48□□□□□ -0.89
SNRNP27-205ENST00000488986 NNTQ13423 1086 aa9.48□□□□□ -0.89
SNRNP27-205ENST00000488986 PRPF38BQ5VTL8 546 aaKnown RBP9.48□□□□□ -0.89
SNRNP27-205ENST00000488986 LIMD1Q9UGP4 676 aa9.48□□□□□ -0.89
SNRNP27-205ENST00000488986 PLEKHG3A1L390 1219 aa9.47□□□□□ -0.89
SNRNP27-205ENST00000488986 PER1O15534 1290 aaPredicted RBP9.47□□□□□ -0.89
SNRNP27-205ENST00000488986 MYSM1Q5VVJ2 828 aa9.47□□□□□ -0.89
SNRNP27-205ENST00000488986 TSC1Q92574 1164 aa9.47□□□□□ -0.89
SNRNP27-205ENST00000488986 FOXJ1Q92949 421 aa9.47□□□□□ -0.89
SNRNP27-205ENST00000488986 WIPF1O43516 503 aa9.46□□□□□ -0.9
SNRNP27-205ENST00000488986 QPCTQ16769 361 aa9.46□□□□□ -0.9
SNRNP27-205ENST00000488986 MPNDQ8N594 471 aa9.46□□□□□ -0.9
SNRNP27-205ENST00000488986 SLC24A3Q9HC58 644 aa9.45□□□□□ -0.9
SNRNP27-205ENST00000488986 FAM174AQ8TBP5 190 aa9.44□□□□□ -0.9
SNRNP27-205ENST00000488986 NUTM2BA6NNL0 878 aaPredicted RBP9.43□□□□□ -0.9
SNRNP27-205ENST00000488986 NUTM2EB1AL46 878 aaPredicted RBP9.43□□□□□ -0.9
SNRNP27-205ENST00000488986 TIMP2P16035 220 aa9.43□□□□□ -0.9
SNRNP27-205ENST00000488986 WDR4P57081 412 aaKnown RBP9.43□□□□□ -0.9
SNRNP27-205ENST00000488986 ARID5BQ14865 1188 aa9.43□□□□□ -0.9
SNRNP27-205ENST00000488986 NUTM2DQ5VT03 806 aaPredicted RBP9.43□□□□□ -0.9
SNRNP27-205ENST00000488986 NUTM2AQ8IVF1 878 aaPredicted RBP9.43□□□□□ -0.9
SNRNP27-205ENST00000488986 ZFP42Q96MM3 310 aa9.43□□□□□ -0.9
SNRNP27-205ENST00000488986 ADH1CP00326 375 aa9.42□□□□□ -0.9
SNRNP27-205ENST00000488986 C4orf48Q5BLP8 95 aa9.42□□□□□ -0.9
SNRNP27-205ENST00000488986 NXF1Q9UBU9 619 aaKnown RBP9.42□□□□□ -0.9
SNRNP27-205ENST00000488986 LILRB3O75022 631 aa9.41□□□□□ -0.9
SNRNP27-205ENST00000488986 AGERQ15109 404 aa9.41□□□□□ -0.9
SNRNP27-205ENST00000488986 VEGFBP49765 207 aa9.4□□□□□ -0.9
SNRNP27-205ENST00000488986 INSM1Q01101 510 aaPredicted RBP9.4□□□□□ -0.9
SNRNP27-205ENST00000488986 TUSC1Q2TAM9 212 aa9.4□□□□□ -0.9
SNRNP27-205ENST00000488986 MRPL14Q6P1L8 145 aaKnown RBP9.4□□□□□ -0.9
SNRNP27-205ENST00000488986 CDK15Q96Q40 435 aa9.4□□□□□ -0.9
SNRNP27-205ENST00000488986 KLF16Q9BXK1 252 aaPredicted RBP9.4□□□□□ -0.9
SNRNP27-205ENST00000488986 RTL5Q5HYW3 569 aaPredicted RBP9.39□□□□□ -0.91
SNRNP27-205ENST00000488986 SLC16A10Q8TF71 515 aa9.39□□□□□ -0.91
SNRNP27-205ENST00000488986 PURBQ96QR8 312 aaKnown RBP9.39□□□□□ -0.91
SNRNP27-205ENST00000488986 NR3C2P08235 984 aa9.38□□□□□ -0.91
SNRNP27-205ENST00000488986 CLK2P49760 499 aaKnown RBP9.38□□□□□ -0.91
SNRNP27-205ENST00000488986 BPHLQ86WA6 291 aaPredicted RBP9.38□□□□□ -0.91
SNRNP27-205ENST00000488986 ZFAND3Q9H8U3 227 aa9.38□□□□□ -0.91
SNRNP27-205ENST00000488986 STK17AQ9UEE5 414 aa9.38□□□□□ -0.91
SNRNP27-205ENST00000488986 ZIC2O95409 532 aaPredicted RBP9.37□□□□□ -0.91
SNRNP27-205ENST00000488986 SCARF1Q14162 830 aa9.37□□□□□ -0.91
SNRNP27-205ENST00000488986 HELBQ8NG08 1087 aaPredicted RBP9.37□□□□□ -0.91
SNRNP27-205ENST00000488986 POLR3EQ9NVU0 708 aa9.37□□□□□ -0.91
SNRNP27-205ENST00000488986 SOBPA7XYQ1 873 aa9.36□□□□□ -0.91
SNRNP27-205ENST00000488986 ITPKCQ96DU7 683 aa9.36□□□□□ -0.91
SNRNP27-205ENST00000488986 GMPRP36959 345 aa9.35□□□□□ -0.91
SNRNP27-205ENST00000488986 GRM5P41594 1212 aa9.35□□□□□ -0.91
SNRNP27-205ENST00000488986 NR5A1Q13285 461 aa9.35□□□□□ -0.91
SNRNP27-205ENST00000488986 H3BM21 787 aa9.34□□□□□ -0.91
SNRNP27-205ENST00000488986 SH3RF1Q7Z6J0 888 aa9.34□□□□□ -0.91
SNRNP27-205ENST00000488986 NPAS3Q8IXF0 933 aa9.34□□□□□ -0.91
SNRNP27-205ENST00000488986 ARMC2Q8NEN0 867 aa9.34□□□□□ -0.91
SNRNP27-205ENST00000488986 IRF7Q92985 503 aa9.34□□□□□ -0.91
SNRNP27-205ENST00000488986 NBPF14Q5TI25 921 aa9.33□□□□□ -0.92
SNRNP27-205ENST00000488986 C1QTNF2Q9BXJ5 285 aa9.33□□□□□ -0.92
SNRNP27-205ENST00000488986 ERBB4Q15303 1308 aa9.32□□□□□ -0.92
SNRNP27-205ENST00000488986 MAGEB6P1A0A0J9YX57 407 aa9.32□□□□□ -0.92
SNRNP27-205ENST00000488986 FSHRP23945 695 aa9.32□□□□□ -0.92
SNRNP27-205ENST00000488986 C6orf118Q5T5N4 469 aa9.32□□□□□ -0.92
SNRNP27-205ENST00000488986 SH3BP5LQ7L8J4 393 aa9.32□□□□□ -0.92
SNRNP27-205ENST00000488986 RSPH6AQ9H0K4 717 aa9.32□□□□□ -0.92
SNRNP27-205ENST00000488986 CARD14Q9BXL6 1004 aa9.31□□□□□ -0.92
SNRNP27-205ENST00000488986 CTDSPL2Q05D32 466 aa9.3□□□□□ -0.92
SNRNP27-205ENST00000488986 VASH1Q7L8A9 365 aaPredicted RBP9.29□□□□□ -0.92
SNRNP27-205ENST00000488986 MAP4K5Q9Y4K4 846 aa9.29□□□□□ -0.92
SNRNP27-205ENST00000488986 TRMT44Q8IYL2 757 aaKnown RBP9.28□□□□□ -0.92
SNRNP27-205ENST00000488986 LINC00528Q8N1L1 170 aa9.28□□□□□ -0.92
SNRNP27-205ENST00000488986 MEIOBQ8N635 442 aa9.28□□□□□ -0.92
SNRNP27-205ENST00000488986 MAN1A2O60476 641 aa9.27□□□□□ -0.93
SNRNP27-205ENST00000488986 BMP2P12643 396 aa9.27□□□□□ -0.93
SNRNP27-205ENST00000488986 TPRNQ4KMQ1 711 aa9.27□□□□□ -0.93
SNRNP27-205ENST00000488986 FBXO31Q5XUX0 539 aaPredicted RBP9.27□□□□□ -0.93
SNRNP27-205ENST00000488986 LRRN4Q8WUT4 740 aa9.27□□□□□ -0.93
SNRNP27-205ENST00000488986 LORP23490 312 aaPredicted RBP9.26□□□□□ -0.93
SNRNP27-205ENST00000488986 ERFEQ4G0M1 354 aa9.26□□□□□ -0.93
SNRNP27-205ENST00000488986 GPBP1L1Q9HC44 474 aaPredicted RBP9.26□□□□□ -0.93
SNRNP27-205ENST00000488986 UPP2O95045 317 aa9.25□□□□□ -0.93
SNRNP27-205ENST00000488986 CCDC116Q8IYX3 515 aa9.25□□□□□ -0.93
SNRNP27-205ENST00000488986 ZSCAN1Q8NBB4 408 aa9.25□□□□□ -0.93
SNRNP27-205ENST00000488986 GPKOWQ92917 476 aaPredicted RBP eCLIP9.25□□□□□ -0.93
SNRNP27-205ENST00000488986 PROCA1Q8NCQ7 364 aaPredicted RBP9.24□□□□□ -0.93
SNRNP27-205ENST00000488986 KDM4CQ9H3R0 1056 aa9.24□□□□□ -0.93
SNRNP27-205ENST00000488986 SKIV2LQ15477 1246 aaKnown RBP9.23□□□□□ -0.93
SNRNP27-205ENST00000488986 EMILIN1Q9Y6C2 1016 aa9.23□□□□□ -0.93
SNRNP27-205ENST00000488986 NR6A1Q15406 480 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms