RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 YEATS2Q9ULM3 1422 aa24.65■■□□□ 1.54
HMG20B-213ENST00000488973 CHMP5Q9NZZ3 219 aa24.64■■□□□ 1.54
HMG20B-213ENST00000488973 TULP4Q9NRJ4 1543 aa24.63■■□□□ 1.53
HMG20B-213ENST00000488973 EVC2Q86UK5 1308 aa24.63■■□□□ 1.53
HMG20B-213ENST00000488973 FSD2A1L4K1 749 aa24.63■■□□□ 1.53
HMG20B-213ENST00000488973 DDX19BQ9UMR2 479 aa24.63■■□□□ 1.53
HMG20B-213ENST00000488973 TMEM132EQ6IEE7 984 aa24.62■■□□□ 1.53
HMG20B-213ENST00000488973 SMC4Q9NTJ3 1288 aa24.62■■□□□ 1.53
HMG20B-213ENST00000488973 GOLGA6L3A6NEY3 463 aa24.61■■□□□ 1.53
HMG20B-213ENST00000488973 RRP9O43818 475 aaKnown RBP24.61■■□□□ 1.53
HMG20B-213ENST00000488973 TRIM27P14373 513 aa24.6■■□□□ 1.53
HMG20B-213ENST00000488973 SMC5Q8IY18 1101 aa24.6■■□□□ 1.53
HMG20B-213ENST00000488973 MFAP1P55081 439 aaKnown RBP24.59■■□□□ 1.53
HMG20B-213ENST00000488973 ARHGAP31Q2M1Z3 1444 aa24.59■■□□□ 1.53
HMG20B-213ENST00000488973 XRCC6P12956 609 aaKnown RBP eCLIP24.59■■□□□ 1.53
HMG20B-213ENST00000488973 EXOSC9Q06265 439 aaKnown RBP24.59■■□□□ 1.53
HMG20B-213ENST00000488973 ATF7IPQ6VMQ6 1270 aa24.59■■□□□ 1.53
HMG20B-213ENST00000488973 TSR2Q969E8 191 aaKnown RBP24.59■■□□□ 1.53
HMG20B-213ENST00000488973 PLEKHF1Q96S99 279 aa24.59■■□□□ 1.53
HMG20B-213ENST00000488973 RRAGDQ9NQL2 400 aaPredicted RBP24.59■■□□□ 1.53
HMG20B-213ENST00000488973 IL16Q14005 1332 aa24.58■■□□□ 1.53
HMG20B-213ENST00000488973 ANKRD26Q9UPS8 1709 aa24.58■■□□□ 1.52
HMG20B-213ENST00000488973 SPRYD3Q8NCJ5 442 aa24.57■■□□□ 1.52
HMG20B-213ENST00000488973 SSH1Q8WYL5 1049 aa24.57■■□□□ 1.52
HMG20B-213ENST00000488973 ABCC11Q96J66 1382 aa24.57■■□□□ 1.52
HMG20B-213ENST00000488973 TMPOP42166 694 aaKnown RBP24.56■■□□□ 1.52
HMG20B-213ENST00000488973 CAMSAP1Q5T5Y3 1602 aa24.56■■□□□ 1.52
HMG20B-213ENST00000488973 COL3A1P02461 1466 aaPredicted RBP24.56■■□□□ 1.52
HMG20B-213ENST00000488973 ITPRIPQ8IWB1 547 aa24.55■■□□□ 1.52
HMG20B-213ENST00000488973 TRIM35Q9UPQ4 493 aa24.55■■□□□ 1.52
HMG20B-213ENST00000488973 HSCBQ8IWL3 235 aa24.54■■□□□ 1.52
HMG20B-213ENST00000488973 NCOA3Q9Y6Q9 1424 aa24.54■■□□□ 1.52
HMG20B-213ENST00000488973 TRAK2O60296 914 aa24.54■■□□□ 1.52
HMG20B-213ENST00000488973 HSP90AA2PQ14568 343 aaPredicted RBP24.54■■□□□ 1.52
HMG20B-213ENST00000488973 REREQ9P2R6 1566 aa24.54■■□□□ 1.52
HMG20B-213ENST00000488973 PIK3C2BO00750 1634 aa24.52■■□□□ 1.52
HMG20B-213ENST00000488973 ZBTB40Q9NUA8 1239 aa24.52■■□□□ 1.52
HMG20B-213ENST00000488973 NOB1Q9ULX3 412 aaKnown RBP24.52■■□□□ 1.52
HMG20B-213ENST00000488973 DDX11L8A8MPP1 907 aa24.51■■□□□ 1.51
HMG20B-213ENST00000488973 RBM25P49756 843 aaKnown RBP24.51■■□□□ 1.51
HMG20B-213ENST00000488973 ZNF692Q9BU19 519 aaPredicted RBP24.51■■□□□ 1.51
HMG20B-213ENST00000488973 NEXMIFQ5QGS0 1516 aa24.51■■□□□ 1.51
HMG20B-213ENST00000488973 KIF16BQ96L93 1317 aa24.5■■□□□ 1.51
HMG20B-213ENST00000488973 IPO8O15397 1037 aaKnown RBP24.5■■□□□ 1.51
HMG20B-213ENST00000488973 TMEM57Q8N5G2 664 aa24.5■■□□□ 1.51
HMG20B-213ENST00000488973 SNX21Q969T3 373 aa24.5■■□□□ 1.51
HMG20B-213ENST00000488973 U2SURPO15042 1029 aaKnown RBP24.49■■□□□ 1.51
HMG20B-213ENST00000488973 TSPOAP1O95153 1857 aa24.49■■□□□ 1.51
HMG20B-213ENST00000488973 AGLP35573 1532 aa24.49■■□□□ 1.51
HMG20B-213ENST00000488973 A0A1W2PP64 1363 aa24.49■■□□□ 1.51
HMG20B-213ENST00000488973 MED14O60244 1454 aa24.49■■□□□ 1.51
HMG20B-213ENST00000488973 VGFO15240 615 aaPredicted RBP24.49■■□□□ 1.51
HMG20B-213ENST00000488973 DDIT3P35638 169 aa24.49■■□□□ 1.51
HMG20B-213ENST00000488973 MRE11P49959 708 aa24.49■■□□□ 1.51
HMG20B-213ENST00000488973 GZF1Q9H116 711 aaPredicted RBP24.49■■□□□ 1.51
HMG20B-213ENST00000488973 CABP2Q9NPB3 220 aa24.49■■□□□ 1.51
HMG20B-213ENST00000488973 SIGLEC1Q9BZZ2 1709 aa24.48■■□□□ 1.51
HMG20B-213ENST00000488973 NUCB1Q02818 461 aa24.48■■□□□ 1.51
HMG20B-213ENST00000488973 ISY1Q9ULR0 285 aaKnown RBP24.48■■□□□ 1.51
HMG20B-213ENST00000488973 FGD1P98174 961 aa24.47■■□□□ 1.51
HMG20B-213ENST00000488973 ALDH1L2Q3SY69 923 aa24.46■■□□□ 1.51
HMG20B-213ENST00000488973 PPP6R1Q9UPN7 881 aa24.46■■□□□ 1.51
HMG20B-213ENST00000488973 KIF13AQ9H1H9 1805 aa24.45■■□□□ 1.51
HMG20B-213ENST00000488973 PNNQ9H307 717 aaKnown RBP24.45■■□□□ 1.5
HMG20B-213ENST00000488973 PANK2Q9BZ23 570 aa24.44■■□□□ 1.5
HMG20B-213ENST00000488973 RIPK4P57078 832 aa24.44■■□□□ 1.5
HMG20B-213ENST00000488973 ARXQ96QS3 562 aa24.44■■□□□ 1.5
HMG20B-213ENST00000488973 CIZ1Q9ULV3 898 aaPredicted RBP24.44■■□□□ 1.5
HMG20B-213ENST00000488973 CLCN1P35523 988 aa24.43■■□□□ 1.5
HMG20B-213ENST00000488973 RBM10P98175 930 aaKnown RBP24.43■■□□□ 1.5
HMG20B-213ENST00000488973 CLTCQ00610 1675 aaKnown RBP24.43■■□□□ 1.5
HMG20B-213ENST00000488973 GGNBP2Q9H3C7 697 aa24.42■■□□□ 1.5
HMG20B-213ENST00000488973 CHD1LQ86WJ1 897 aa24.41■■□□□ 1.5
HMG20B-213ENST00000488973 SLC52A1Q9NWF4 448 aa24.41■■□□□ 1.5
HMG20B-213ENST00000488973 BRPF1P55201 1214 aaPredicted RBP24.41■■□□□ 1.5
HMG20B-213ENST00000488973 BMP2KLQ5H9B9 411 aa24.41■■□□□ 1.5
HMG20B-213ENST00000488973 ZNF428Q96B54 188 aa24.41■■□□□ 1.5
HMG20B-213ENST00000488973 ZFYVE9O95405 1425 aa24.4■■□□□ 1.5
HMG20B-213ENST00000488973 CDC42BPGQ6DT37 1551 aa24.4■■□□□ 1.5
HMG20B-213ENST00000488973 ATAD2Q6PL18 1390 aa24.4■■□□□ 1.5
HMG20B-213ENST00000488973 PNPLA6Q8IY17 1366 aa24.4■■□□□ 1.5
HMG20B-213ENST00000488973 GRPEL1Q9HAV7 217 aa24.4■■□□□ 1.5
HMG20B-213ENST00000488973 FYB1O15117 783 aa24.39■■□□□ 1.5
HMG20B-213ENST00000488973 TERF2IPQ9NYB0 399 aa24.39■■□□□ 1.5
HMG20B-213ENST00000488973 KIF20BQ96Q89 1820 aa24.39■■□□□ 1.5
HMG20B-213ENST00000488973 DIAPH1O60610 1272 aaKnown RBP24.39■■□□□ 1.49
HMG20B-213ENST00000488973 HSP90AA1P07900 732 aaKnown RBP24.39■■□□□ 1.49
HMG20B-213ENST00000488973 LNPKQ9C0E8 428 aa24.39■■□□□ 1.49
HMG20B-213ENST00000488973 SRPK2P78362 688 aaKnown RBP24.37■■□□□ 1.49
HMG20B-213ENST00000488973 PPIP5K1Q6PFW1 1433 aa24.37■■□□□ 1.49
HMG20B-213ENST00000488973 CHMP4BQ9H444 224 aaKnown RBP24.37■■□□□ 1.49
HMG20B-213ENST00000488973 CD163L1Q9NR16 1453 aa24.37■■□□□ 1.49
HMG20B-213ENST00000488973 PTMSP20962 102 aa24.36■■□□□ 1.49
HMG20B-213ENST00000488973 NUTM2DQ5VT03 806 aaPredicted RBP24.36■■□□□ 1.49
HMG20B-213ENST00000488973 TNPO1Q92973 898 aaKnown RBP24.36■■□□□ 1.49
HMG20B-213ENST00000488973 GBP4Q96PP9 640 aa24.36■■□□□ 1.49
HMG20B-213ENST00000488973 ARHGEF40Q8TER5 1519 aa24.36■■□□□ 1.49
HMG20B-213ENST00000488973 PDE4CQ08493 712 aa24.35■■□□□ 1.49
HMG20B-213ENST00000488973 GCC1Q96CN9 775 aa24.35■■□□□ 1.49
HMG20B-213ENST00000488973 HSP90AB1P08238 724 aaKnown RBP24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 121.4 ms