RNA–Protein interactions for RNA: ENST00000488967.5

ACTA2-206, Transcript of actin, alpha 2, smooth muscle, aorta, humanhuman

TSL 2

Gene ACTA2, Length 762 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA2-206ENST00000488967 ATP7BP35670 1465 aa16.54■□□□□ 0.24
ACTA2-206ENST00000488967 RGS12O14924 1447 aa16.53■□□□□ 0.24
ACTA2-206ENST00000488967 POLR3AO14802 1390 aaPredicted RBP16.53■□□□□ 0.24
ACTA2-206ENST00000488967 TRIM26Q12899 539 aaPredicted RBP16.53■□□□□ 0.24
ACTA2-206ENST00000488967 NEUROD1Q13562 356 aa16.52■□□□□ 0.24
ACTA2-206ENST00000488967 CABLES1Q8TDN4 633 aa16.52■□□□□ 0.24
ACTA2-206ENST00000488967 ALS2Q96Q42 1657 aa16.52■□□□□ 0.23
ACTA2-206ENST00000488967 VPS72Q15906 364 aa16.51■□□□□ 0.23
ACTA2-206ENST00000488967 NBPF8Q3BBV2 869 aa16.51■□□□□ 0.23
ACTA2-206ENST00000488967 BRD4O60885 1362 aaPredicted RBP16.51■□□□□ 0.23
ACTA2-206ENST00000488967 NWD2Q9ULI1 1742 aa16.5■□□□□ 0.23
ACTA2-206ENST00000488967 FAM83GA6ND36 823 aa16.5■□□□□ 0.23
ACTA2-206ENST00000488967 ONECUT3O60422 494 aaPredicted RBP16.5■□□□□ 0.23
ACTA2-206ENST00000488967 ACEP12821 1306 aa16.49■□□□□ 0.23
ACTA2-206ENST00000488967 CCDC125Q86Z20 511 aa16.49■□□□□ 0.23
ACTA2-206ENST00000488967 ATAD2Q6PL18 1390 aa16.49■□□□□ 0.23
ACTA2-206ENST00000488967 TRPM1Q7Z4N2 1603 aa16.48■□□□□ 0.23
ACTA2-206ENST00000488967 PAK3O75914 559 aaPredicted RBP16.48■□□□□ 0.23
ACTA2-206ENST00000488967 SRPK2P78362 688 aaKnown RBP16.48■□□□□ 0.23
ACTA2-206ENST00000488967 ABCA3Q99758 1704 aa16.48■□□□□ 0.23
ACTA2-206ENST00000488967 TOPAZ1Q8N9V7 1692 aa16.47■□□□□ 0.23
ACTA2-206ENST00000488967 EVC2Q86UK5 1308 aa16.46■□□□□ 0.23
ACTA2-206ENST00000488967 ROCK2O75116 1388 aaKnown RBP16.46■□□□□ 0.23
ACTA2-206ENST00000488967 RALGAPBQ86X10 1494 aa16.46■□□□□ 0.23
ACTA2-206ENST00000488967 CABP2Q9NPB3 220 aa16.44■□□□□ 0.22
ACTA2-206ENST00000488967 FOXD4L1Q9NU39 408 aa16.44■□□□□ 0.22
ACTA2-206ENST00000488967 PPIP5K1Q6PFW1 1433 aa16.44■□□□□ 0.22
ACTA2-206ENST00000488967 COL14A1Q05707 1796 aaKnown RBP16.43■□□□□ 0.22
ACTA2-206ENST00000488967 PLCH1Q4KWH8 1693 aa16.43■□□□□ 0.22
ACTA2-206ENST00000488967 QRICH2Q9H0J4 1663 aa16.43■□□□□ 0.22
ACTA2-206ENST00000488967 ABTB2Q8N961 1025 aa16.43■□□□□ 0.22
ACTA2-206ENST00000488967 ZNF692Q9BU19 519 aaPredicted RBP16.43■□□□□ 0.22
ACTA2-206ENST00000488967 BTG4Q9NY30 223 aa16.43■□□□□ 0.22
ACTA2-206ENST00000488967 GLI3P10071 1580 aa16.43■□□□□ 0.22
ACTA2-206ENST00000488967 CRYBG1Q9Y4K1 1723 aa16.42■□□□□ 0.22
ACTA2-206ENST00000488967 NLRP13Q86W25 1043 aa16.42■□□□□ 0.22
ACTA2-206ENST00000488967 CABP1Q9NZU7 370 aa16.42■□□□□ 0.22
ACTA2-206ENST00000488967 TONSLQ96HA7 1378 aa16.41■□□□□ 0.22
ACTA2-206ENST00000488967 SBNO2Q9Y2G9 1366 aa16.41■□□□□ 0.22
ACTA2-206ENST00000488967 PRDM11Q9NQV5 511 aa16.41■□□□□ 0.22
ACTA2-206ENST00000488967 SLC24A1O60721 1099 aa16.4■□□□□ 0.22
ACTA2-206ENST00000488967 PLEKHG5O94827 1062 aa16.4■□□□□ 0.22
ACTA2-206ENST00000488967 SEPT12Q8IYM1 358 aa16.4■□□□□ 0.22
ACTA2-206ENST00000488967 RNF39Q9H2S5 420 aa16.4■□□□□ 0.22
ACTA2-206ENST00000488967 CCDC9Q9Y3X0 531 aaKnown RBP16.39■□□□□ 0.21
ACTA2-206ENST00000488967 CPDO75976 1380 aa16.38■□□□□ 0.21
ACTA2-206ENST00000488967 PUS7Q96PZ0 661 aaKnown RBP16.38■□□□□ 0.21
ACTA2-206ENST00000488967 CARD11Q9BXL7 1154 aa16.38■□□□□ 0.21
ACTA2-206ENST00000488967 USP19O94966 1318 aa16.38■□□□□ 0.21
ACTA2-206ENST00000488967 SPATA31A5Q5VU36 1347 aa16.38■□□□□ 0.21
ACTA2-206ENST00000488967 SPATA31A7Q8IWB4 1347 aa16.38■□□□□ 0.21
ACTA2-206ENST00000488967 NRAPQ86VF7 1730 aa16.37■□□□□ 0.21
ACTA2-206ENST00000488967 KIAA0232Q92628 1395 aa16.37■□□□□ 0.21
ACTA2-206ENST00000488967 USP6P35125 1406 aa16.36■□□□□ 0.21
ACTA2-206ENST00000488967 SSH2Q76I76 1423 aa16.36■□□□□ 0.21
ACTA2-206ENST00000488967 GCP02774 474 aa16.36■□□□□ 0.21
ACTA2-206ENST00000488967 KRT27Q7Z3Y8 459 aa16.36■□□□□ 0.21
ACTA2-206ENST00000488967 PHRF1Q9P1Y6 1649 aaKnown RBP16.35■□□□□ 0.21
ACTA2-206ENST00000488967 ZBTB22O15209 634 aa16.34■□□□□ 0.21
ACTA2-206ENST00000488967 ZC3H6P61129 1189 aaKnown RBP16.34■□□□□ 0.21
ACTA2-206ENST00000488967 NUTM2GQ5VZR2 741 aa16.34■□□□□ 0.21
ACTA2-206ENST00000488967 TIMELESSQ9UNS1 1208 aa16.34■□□□□ 0.21
ACTA2-206ENST00000488967 NLRP6P59044 892 aa16.33■□□□□ 0.2
ACTA2-206ENST00000488967 SPATA31A1Q5TZJ5 1347 aa16.33■□□□□ 0.2
ACTA2-206ENST00000488967 TTC21AQ8NDW8 1320 aa16.33■□□□□ 0.2
ACTA2-206ENST00000488967 BLMP54132 1417 aaPredicted RBP16.33■□□□□ 0.2
ACTA2-206ENST00000488967 CPSF1Q10570 1443 aaKnown RBP16.33■□□□□ 0.2
ACTA2-206ENST00000488967 BRWD3Q6RI45 1802 aa16.33■□□□□ 0.2
ACTA2-206ENST00000488967 EVA1CP58658 441 aa16.32■□□□□ 0.2
ACTA2-206ENST00000488967 FAM98CQ17RN3 349 aaKnown RBP16.32■□□□□ 0.2
ACTA2-206ENST00000488967 U3KPZ7 1027 aaPredicted RBP16.32■□□□□ 0.2
ACTA2-206ENST00000488967 CLSPNQ9HAW4 1339 aa16.31■□□□□ 0.2
ACTA2-206ENST00000488967 CHRNA2Q15822 529 aa16.31■□□□□ 0.2
ACTA2-206ENST00000488967 BARGINQ6ZT62 677 aa16.31■□□□□ 0.2
ACTA2-206ENST00000488967 NRKQ7Z2Y5 1582 aa16.3■□□□□ 0.2
ACTA2-206ENST00000488967 TTC21BQ7Z4L5 1316 aa16.3■□□□□ 0.2
ACTA2-206ENST00000488967 KCNH5Q8NCM2 988 aa16.3■□□□□ 0.2
ACTA2-206ENST00000488967 THRAP3Q9Y2W1 955 aaKnown RBP16.3■□□□□ 0.2
ACTA2-206ENST00000488967 AATKQ6ZMQ8 1374 aa16.29■□□□□ 0.2
ACTA2-206ENST00000488967 SF3B2Q13435 895 aaKnown RBP16.29■□□□□ 0.2
ACTA2-206ENST00000488967 AKAP12Q02952 1782 aa16.28■□□□□ 0.2
ACTA2-206ENST00000488967 EP400Q96L91 3159 aa16.28■□□□□ 0.2
ACTA2-206ENST00000488967 CAMTA1Q9Y6Y1 1673 aa16.28■□□□□ 0.2
ACTA2-206ENST00000488967 STRN4Q9NRL3 753 aa16.28■□□□□ 0.2
ACTA2-206ENST00000488967 SLIT3O75094 1523 aa16.28■□□□□ 0.2
ACTA2-206ENST00000488967 LMO7Q8WWI1 1683 aa16.27■□□□□ 0.2
ACTA2-206ENST00000488967 KTN1Q86UP2 1357 aaKnown RBP16.27■□□□□ 0.2
ACTA2-206ENST00000488967 A0A0G2JS52 829 aa16.27■□□□□ 0.2
ACTA2-206ENST00000488967 MYT1Q01538 1121 aa16.27■□□□□ 0.2
ACTA2-206ENST00000488967 MYCNP04198 464 aaPredicted RBP16.26■□□□□ 0.19
ACTA2-206ENST00000488967 ZRANB1Q9UGI0 708 aa16.26■□□□□ 0.19
ACTA2-206ENST00000488967 THSD7AQ9UPZ6 1657 aa16.26■□□□□ 0.19
ACTA2-206ENST00000488967 C11orf95C9JLR9 678 aaPredicted RBP16.25■□□□□ 0.19
ACTA2-206ENST00000488967 HDGFL2Q7Z4V5 671 aaPredicted RBP16.25■□□□□ 0.19
ACTA2-206ENST00000488967 ARHGEF25Q86VW2 580 aa16.25■□□□□ 0.19
ACTA2-206ENST00000488967 TCP11L2Q8N4U5 519 aa16.25■□□□□ 0.19
ACTA2-206ENST00000488967 TESK2Q96S53 571 aa16.25■□□□□ 0.19
ACTA2-206ENST00000488967 TERF2IPQ9NYB0 399 aa16.25■□□□□ 0.19
ACTA2-206ENST00000488967 USP31Q70CQ4 1352 aa16.25■□□□□ 0.19
ACTA2-206ENST00000488967 NINLQ9Y2I6 1382 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms