RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 DEKP35659 375 aaKnown RBP17.71■□□□□ 0.43
CHD1L-208ENST00000488864 TNNT2P45379 298 aaPredicted RBP17.71■□□□□ 0.43
CHD1L-208ENST00000488864 PHF8Q9UPP1 1060 aa17.71■□□□□ 0.43
CHD1L-208ENST00000488864 XIRP1Q702N8 1843 aaKnown RBP17.71■□□□□ 0.43
CHD1L-208ENST00000488864 CADPS2Q86UW7 1296 aa17.7■□□□□ 0.42
CHD1L-208ENST00000488864 NCOA3Q9Y6Q9 1424 aa17.7■□□□□ 0.42
CHD1L-208ENST00000488864 RALBP1Q15311 655 aa17.7■□□□□ 0.42
CHD1L-208ENST00000488864 PARD3Q8TEW0 1356 aa17.7■□□□□ 0.42
CHD1L-208ENST00000488864 ZNF692Q9BU19 519 aaPredicted RBP17.7■□□□□ 0.42
CHD1L-208ENST00000488864 FYB1O15117 783 aa17.69■□□□□ 0.42
CHD1L-208ENST00000488864 FOXO3O43524 673 aa17.69■□□□□ 0.42
CHD1L-208ENST00000488864 C1orf167Q5SNV9 1468 aa17.68■□□□□ 0.42
CHD1L-208ENST00000488864 XPCQ01831 940 aaPredicted RBP17.68■□□□□ 0.42
CHD1L-208ENST00000488864 NME9Q86XW9 330 aa17.68■□□□□ 0.42
CHD1L-208ENST00000488864 ZRANB1Q9UGI0 708 aa17.68■□□□□ 0.42
CHD1L-208ENST00000488864 PAK3O75914 559 aaPredicted RBP17.68■□□□□ 0.42
CHD1L-208ENST00000488864 ITSN1Q15811 1721 aa17.67■□□□□ 0.42
CHD1L-208ENST00000488864 MORC1Q86VD1 984 aa17.67■□□□□ 0.42
CHD1L-208ENST00000488864 MST1RQ04912 1400 aa17.67■□□□□ 0.42
CHD1L-208ENST00000488864 USP6P35125 1406 aa17.66■□□□□ 0.42
CHD1L-208ENST00000488864 EDC4Q6P2E9 1401 aaKnown RBP17.66■□□□□ 0.42
CHD1L-208ENST00000488864 POLR3AO14802 1390 aaPredicted RBP17.66■□□□□ 0.42
CHD1L-208ENST00000488864 NPC1L1Q9UHC9 1359 aa17.66■□□□□ 0.42
CHD1L-208ENST00000488864 MYBBP1AQ9BQG0 1328 aaKnown RBP17.66■□□□□ 0.42
CHD1L-208ENST00000488864 DDX17Q92841 729 aaKnown RBP17.66■□□□□ 0.42
CHD1L-208ENST00000488864 NOP58Q9Y2X3 529 aaKnown RBP17.66■□□□□ 0.42
CHD1L-208ENST00000488864 DCCP43146 1447 aa17.66■□□□□ 0.42
CHD1L-208ENST00000488864 TTC21BQ7Z4L5 1316 aa17.65■□□□□ 0.42
CHD1L-208ENST00000488864 PSME1Q06323 249 aa17.64■□□□□ 0.42
CHD1L-208ENST00000488864 AKAP12Q02952 1782 aa17.64■□□□□ 0.41
CHD1L-208ENST00000488864 LTBP4Q8N2S1 1624 aa17.64■□□□□ 0.41
CHD1L-208ENST00000488864 FBLN1P23142 703 aa17.63■□□□□ 0.41
CHD1L-208ENST00000488864 SLAIN2Q9P270 581 aa17.63■□□□□ 0.41
CHD1L-208ENST00000488864 MON2Q7Z3U7 1717 aa17.63■□□□□ 0.41
CHD1L-208ENST00000488864 PPP2R1AP30153 589 aa17.63■□□□□ 0.41
CHD1L-208ENST00000488864 NBR1Q14596 966 aa17.63■□□□□ 0.41
CHD1L-208ENST00000488864 NUTM2GQ5VZR2 741 aa17.63■□□□□ 0.41
CHD1L-208ENST00000488864 NLRP13Q86W25 1043 aa17.61■□□□□ 0.41
CHD1L-208ENST00000488864 PLEKHG5O94827 1062 aa17.61■□□□□ 0.41
CHD1L-208ENST00000488864 NSD2O96028 1365 aa17.6■□□□□ 0.41
CHD1L-208ENST00000488864 SSH2Q76I76 1423 aa17.6■□□□□ 0.41
CHD1L-208ENST00000488864 SOX12O15370 315 aa17.6■□□□□ 0.41
CHD1L-208ENST00000488864 BRINP3Q76B58 766 aa17.6■□□□□ 0.41
CHD1L-208ENST00000488864 SMG6Q86US8 1419 aaKnown RBP17.59■□□□□ 0.41
CHD1L-208ENST00000488864 LMOD2Q6P5Q4 547 aa17.59■□□□□ 0.41
CHD1L-208ENST00000488864 COG3Q96JB2 828 aa17.59■□□□□ 0.41
CHD1L-208ENST00000488864 ABTB2Q8N961 1025 aa17.58■□□□□ 0.41
CHD1L-208ENST00000488864 NRKQ7Z2Y5 1582 aa17.58■□□□□ 0.4
CHD1L-208ENST00000488864 KRT28Q7Z3Y7 464 aa17.58■□□□□ 0.4
CHD1L-208ENST00000488864 KIF20BQ96Q89 1820 aa17.57■□□□□ 0.4
CHD1L-208ENST00000488864 SENP3-EIF4A1A0A087X0R7 540 aa17.57■□□□□ 0.4
CHD1L-208ENST00000488864 NLRP6P59044 892 aa17.57■□□□□ 0.4
CHD1L-208ENST00000488864 TTC21AQ8NDW8 1320 aa17.56■□□□□ 0.4
CHD1L-208ENST00000488864 BRD4O60885 1362 aaPredicted RBP17.56■□□□□ 0.4
CHD1L-208ENST00000488864 MTHFSP49914 203 aa17.56■□□□□ 0.4
CHD1L-208ENST00000488864 NUDCQ9Y266 331 aa17.55■□□□□ 0.4
CHD1L-208ENST00000488864 RNF123Q5XPI4 1314 aa17.55■□□□□ 0.4
CHD1L-208ENST00000488864 PPM1GO15355 546 aaPredicted RBP17.55■□□□□ 0.4
CHD1L-208ENST00000488864 CCDC136Q96JN2 1154 aa17.54■□□□□ 0.4
CHD1L-208ENST00000488864 NPHP3Q7Z494 1330 aa17.54■□□□□ 0.4
CHD1L-208ENST00000488864 RRS1Q15050 365 aaKnown RBP17.53■□□□□ 0.4
CHD1L-208ENST00000488864 KIF1AQ12756 1690 aa17.53■□□□□ 0.4
CHD1L-208ENST00000488864 OVOS2A0A0J9YW53 1432 aa17.52■□□□□ 0.4
CHD1L-208ENST00000488864 OVOS2Q6IE36 1432 aa17.52■□□□□ 0.4
CHD1L-208ENST00000488864 PIK3C2AO00443 1686 aa17.52■□□□□ 0.39
CHD1L-208ENST00000488864 ANKRD26Q9UPS8 1709 aa17.51■□□□□ 0.39
CHD1L-208ENST00000488864 PNISRQ8TF01 805 aaKnown RBP17.51■□□□□ 0.39
CHD1L-208ENST00000488864 IPO9Q96P70 1041 aaKnown RBP17.51■□□□□ 0.39
CHD1L-208ENST00000488864 EMILIN1Q9Y6C2 1016 aa17.51■□□□□ 0.39
CHD1L-208ENST00000488864 PIP4K2BP78356 416 aa17.5■□□□□ 0.39
CHD1L-208ENST00000488864 POLKQ9UBT6 870 aa17.5■□□□□ 0.39
CHD1L-208ENST00000488864 ANP32AP39687 249 aaKnown RBP17.48■□□□□ 0.39
CHD1L-208ENST00000488864 USP31Q70CQ4 1352 aa17.47■□□□□ 0.39
CHD1L-208ENST00000488864 UBAP1LF5GYI3 381 aa17.47■□□□□ 0.39
CHD1L-208ENST00000488864 PXDNQ92626 1479 aa17.47■□□□□ 0.39
CHD1L-208ENST00000488864 TOM1O60784 492 aa17.46■□□□□ 0.39
CHD1L-208ENST00000488864 TRPM3Q9HCF6 1732 aaPredicted RBP17.46■□□□□ 0.39
CHD1L-208ENST00000488864 CABLES1Q8TDN4 633 aa17.46■□□□□ 0.38
CHD1L-208ENST00000488864 MAP2P11137 1827 aaKnown RBP17.46■□□□□ 0.38
CHD1L-208ENST00000488864 ZBTB47Q9UFB7 747 aaPredicted RBP17.45■□□□□ 0.38
CHD1L-208ENST00000488864 ZBTB7CA1YPR0 619 aa17.45■□□□□ 0.38
CHD1L-208ENST00000488864 CFAP53Q96M91 514 aa17.45■□□□□ 0.38
CHD1L-208ENST00000488864 SOS2Q07890 1332 aaPredicted RBP17.44■□□□□ 0.38
CHD1L-208ENST00000488864 WDR43Q15061 677 aaKnown RBP eCLIP17.44■□□□□ 0.38
CHD1L-208ENST00000488864 CERKQ8TCT0 537 aa17.44■□□□□ 0.38
CHD1L-208ENST00000488864 SPATA31A3Q5VYP0 1347 aa17.44■□□□□ 0.38
CHD1L-208ENST00000488864 AATKQ6ZMQ8 1374 aa17.44■□□□□ 0.38
CHD1L-208ENST00000488864 ROBO1Q9Y6N7 1651 aa17.44■□□□□ 0.38
CHD1L-208ENST00000488864 ADAMTS8Q9UP79 889 aa17.43■□□□□ 0.38
CHD1L-208ENST00000488864 MAP3K19Q56UN5 1328 aa17.43■□□□□ 0.38
CHD1L-208ENST00000488864 SBNO1A3KN83 1393 aa17.43■□□□□ 0.38
CHD1L-208ENST00000488864 MARF1Q9Y4F3 1742 aaKnown RBP17.43■□□□□ 0.38
CHD1L-208ENST00000488864 TNS3Q68CZ2 1445 aa17.42■□□□□ 0.38
CHD1L-208ENST00000488864 GCP02774 474 aa17.42■□□□□ 0.38
CHD1L-208ENST00000488864 HSP90AB2PQ58FF8 381 aa17.41■□□□□ 0.38
CHD1L-208ENST00000488864 U2SURPO15042 1029 aaKnown RBP17.4■□□□□ 0.38
CHD1L-208ENST00000488864 AMPHP49418 695 aa17.4■□□□□ 0.38
CHD1L-208ENST00000488864 ALS2Q96Q42 1657 aa17.4■□□□□ 0.38
CHD1L-208ENST00000488864 ZC3H6P61129 1189 aaKnown RBP17.4■□□□□ 0.38
CHD1L-208ENST00000488864 DIAPH1O60610 1272 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms