RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 LRP6O75581 1613 aa12.41□□□□□ -0.42
SMKR1-202ENST00000488846 NRKQ7Z2Y5 1582 aa12.4□□□□□ -0.42
SMKR1-202ENST00000488846 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
SMKR1-202ENST00000488846 MON2Q7Z3U7 1717 aa12.4□□□□□ -0.43
SMKR1-202ENST00000488846 CRYBG1Q9Y4K1 1723 aa12.39□□□□□ -0.43
SMKR1-202ENST00000488846 MYOM1P52179 1685 aa12.38□□□□□ -0.43
SMKR1-202ENST00000488846 A0A1W2PP64 1363 aa12.38□□□□□ -0.43
SMKR1-202ENST00000488846 ANKRD36BQ8N2N9 1353 aa12.38□□□□□ -0.43
SMKR1-202ENST00000488846 ABCA3Q99758 1704 aa12.37□□□□□ -0.43
SMKR1-202ENST00000488846 C11orf95C9JLR9 678 aaPredicted RBP12.37□□□□□ -0.43
SMKR1-202ENST00000488846 TERF2IPQ9NYB0 399 aa12.37□□□□□ -0.43
SMKR1-202ENST00000488846 KTN1Q86UP2 1357 aaKnown RBP12.37□□□□□ -0.43
SMKR1-202ENST00000488846 EDC4Q6P2E9 1401 aaKnown RBP12.37□□□□□ -0.43
SMKR1-202ENST00000488846 TTC21BQ7Z4L5 1316 aa12.37□□□□□ -0.43
SMKR1-202ENST00000488846 TTC21AQ8NDW8 1320 aa12.37□□□□□ -0.43
SMKR1-202ENST00000488846 ZEB1P37275 1124 aaPredicted RBP12.36□□□□□ -0.43
SMKR1-202ENST00000488846 TMC1Q8TDI8 760 aa12.36□□□□□ -0.43
SMKR1-202ENST00000488846 USP19O94966 1318 aa12.36□□□□□ -0.43
SMKR1-202ENST00000488846 PIK3C2AO00443 1686 aa12.35□□□□□ -0.43
SMKR1-202ENST00000488846 USP54Q70EL1 1684 aa12.35□□□□□ -0.43
SMKR1-202ENST00000488846 PAK3O75914 559 aaPredicted RBP12.35□□□□□ -0.43
SMKR1-202ENST00000488846 HDGFL2Q7Z4V5 671 aaPredicted RBP12.35□□□□□ -0.43
SMKR1-202ENST00000488846 MARF1Q9Y4F3 1742 aaKnown RBP12.34□□□□□ -0.43
SMKR1-202ENST00000488846 USP31Q70CQ4 1352 aa12.34□□□□□ -0.43
SMKR1-202ENST00000488846 ABTB2Q8N961 1025 aa12.34□□□□□ -0.43
SMKR1-202ENST00000488846 RGS17Q9UGC6 210 aaPredicted RBP12.34□□□□□ -0.43
SMKR1-202ENST00000488846 SLIT3O75094 1523 aa12.33□□□□□ -0.44
SMKR1-202ENST00000488846 NUTM2BA6NNL0 878 aaPredicted RBP12.33□□□□□ -0.44
SMKR1-202ENST00000488846 NUTM2EB1AL46 878 aaPredicted RBP12.33□□□□□ -0.44
SMKR1-202ENST00000488846 NLRP13Q86W25 1043 aa12.33□□□□□ -0.44
SMKR1-202ENST00000488846 NUTM2AQ8IVF1 878 aaPredicted RBP12.33□□□□□ -0.44
SMKR1-202ENST00000488846 CABLES1Q8TDN4 633 aa12.33□□□□□ -0.44
SMKR1-202ENST00000488846 KIF7Q2M1P5 1343 aa12.33□□□□□ -0.44
SMKR1-202ENST00000488846 PHRF1Q9P1Y6 1649 aaKnown RBP12.33□□□□□ -0.44
SMKR1-202ENST00000488846 LMOD2Q6P5Q4 547 aa12.32□□□□□ -0.44
SMKR1-202ENST00000488846 FNBP4Q8N3X1 1017 aaPredicted RBP12.32□□□□□ -0.44
SMKR1-202ENST00000488846 CARD14Q9BXL6 1004 aa12.31□□□□□ -0.44
SMKR1-202ENST00000488846 SLIT2O94813 1529 aa12.31□□□□□ -0.44
SMKR1-202ENST00000488846 CPDO75976 1380 aa12.3□□□□□ -0.44
SMKR1-202ENST00000488846 OVOS2A0A0J9YW53 1432 aa12.3□□□□□ -0.44
SMKR1-202ENST00000488846 OVOS2Q6IE36 1432 aa12.3□□□□□ -0.44
SMKR1-202ENST00000488846 ADAMTS2O95450 1211 aa12.3□□□□□ -0.44
SMKR1-202ENST00000488846 NLRP6P59044 892 aa12.3□□□□□ -0.44
SMKR1-202ENST00000488846 CCDC7Q96M83 1385 aa12.3□□□□□ -0.44
SMKR1-202ENST00000488846 GCP02774 474 aa12.29□□□□□ -0.44
SMKR1-202ENST00000488846 MEX3CQ5U5Q3 659 aaKnown RBP12.29□□□□□ -0.44
SMKR1-202ENST00000488846 NUTM2GQ5VZR2 741 aa12.29□□□□□ -0.44
SMKR1-202ENST00000488846 AFF2P51816 1311 aa12.29□□□□□ -0.44
SMKR1-202ENST00000488846 WASHC2AQ641Q2 1341 aa12.29□□□□□ -0.44
SMKR1-202ENST00000488846 BCL9LQ86UU0 1499 aa12.28□□□□□ -0.44
SMKR1-202ENST00000488846 FAM83GA6ND36 823 aa12.28□□□□□ -0.44
SMKR1-202ENST00000488846 FYB1O15117 783 aa12.28□□□□□ -0.44
SMKR1-202ENST00000488846 NME9Q86XW9 330 aa12.28□□□□□ -0.44
SMKR1-202ENST00000488846 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMKR1-202ENST00000488846 C8orf37Q96NL8 207 aa12.28□□□□□ -0.44
SMKR1-202ENST00000488846 NFAT5O94916 1531 aa12.27□□□□□ -0.44
SMKR1-202ENST00000488846 ZNF772Q68DY9 489 aaPredicted RBP12.27□□□□□ -0.45
SMKR1-202ENST00000488846 KCNH5Q8NCM2 988 aa12.27□□□□□ -0.45
SMKR1-202ENST00000488846 NGLY1Q96IV0 654 aa12.27□□□□□ -0.45
SMKR1-202ENST00000488846 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.27□□□□□ -0.45
SMKR1-202ENST00000488846 NWD2Q9ULI1 1742 aa12.27□□□□□ -0.45
SMKR1-202ENST00000488846 COL14A1Q05707 1796 aaKnown RBP12.27□□□□□ -0.45
SMKR1-202ENST00000488846 NSD3Q9BZ95 1437 aa12.27□□□□□ -0.45
SMKR1-202ENST00000488846 HAP1P54257 671 aaPredicted RBP12.26□□□□□ -0.45
SMKR1-202ENST00000488846 PANK3Q9H999 370 aa12.26□□□□□ -0.45
SMKR1-202ENST00000488846 ZRANB1Q9UGI0 708 aa12.26□□□□□ -0.45
SMKR1-202ENST00000488846 KIAA0232Q92628 1395 aa12.26□□□□□ -0.45
SMKR1-202ENST00000488846 PLCH1Q4KWH8 1693 aa12.26□□□□□ -0.45
SMKR1-202ENST00000488846 LMO7Q8WWI1 1683 aa12.26□□□□□ -0.45
SMKR1-202ENST00000488846 POTEAQ6S8J7 498 aa12.25□□□□□ -0.45
SMKR1-202ENST00000488846 ARHGEF25Q86VW2 580 aa12.25□□□□□ -0.45
SMKR1-202ENST00000488846 ABCC6O95255 1503 aa12.25□□□□□ -0.45
SMKR1-202ENST00000488846 PER1O15534 1290 aaPredicted RBP12.24□□□□□ -0.45
SMKR1-202ENST00000488846 ATRNO75882 1429 aa12.24□□□□□ -0.45
SMKR1-202ENST00000488846 COL18A1P39060 1754 aa12.24□□□□□ -0.45
SMKR1-202ENST00000488846 AATKQ6ZMQ8 1374 aa12.24□□□□□ -0.45
SMKR1-202ENST00000488846 NRAPQ86VF7 1730 aa12.24□□□□□ -0.45
SMKR1-202ENST00000488846 UNC5CLQ8IV45 518 aa12.24□□□□□ -0.45
SMKR1-202ENST00000488846 KIF20BQ96Q89 1820 aa12.24□□□□□ -0.45
SMKR1-202ENST00000488846 POLR3GLQ9BT43 218 aa12.24□□□□□ -0.45
SMKR1-202ENST00000488846 USP21Q9UK80 565 aa12.24□□□□□ -0.45
SMKR1-202ENST00000488846 CGNL1Q0VF96 1302 aa12.23□□□□□ -0.45
SMKR1-202ENST00000488846 ZC3H6P61129 1189 aaKnown RBP12.23□□□□□ -0.45
SMKR1-202ENST00000488846 COG3Q96JB2 828 aa12.23□□□□□ -0.45
SMKR1-202ENST00000488846 PRDM11Q9NQV5 511 aa12.23□□□□□ -0.45
SMKR1-202ENST00000488846 CAMTA1Q9Y6Y1 1673 aa12.22□□□□□ -0.45
SMKR1-202ENST00000488846 PLEKHG5O94827 1062 aa12.22□□□□□ -0.45
SMKR1-202ENST00000488846 QTRT2Q9H974 415 aaKnown RBP12.22□□□□□ -0.45
SMKR1-202ENST00000488846 NSD2O96028 1365 aa12.21□□□□□ -0.45
SMKR1-202ENST00000488846 GGNBP2Q9H3C7 697 aa12.21□□□□□ -0.45
SMKR1-202ENST00000488846 BTG4Q9NY30 223 aa12.21□□□□□ -0.45
SMKR1-202ENST00000488846 TRPC5Q9UL62 973 aaPredicted RBP12.21□□□□□ -0.45
SMKR1-202ENST00000488846 CDK12Q9NYV4 1490 aaPredicted RBP12.21□□□□□ -0.46
SMKR1-202ENST00000488846 ANKRD26Q9UPS8 1709 aa12.2□□□□□ -0.46
SMKR1-202ENST00000488846 NPC1L1Q9UHC9 1359 aa12.2□□□□□ -0.46
SMKR1-202ENST00000488846 CHRNA2Q15822 529 aa12.2□□□□□ -0.46
SMKR1-202ENST00000488846 VPS72Q15906 364 aa12.2□□□□□ -0.46
SMKR1-202ENST00000488846 AMER1Q5JTC6 1135 aaPredicted RBP12.2□□□□□ -0.46
SMKR1-202ENST00000488846 RBM6P78332 1123 aaKnown RBP12.19□□□□□ -0.46
SMKR1-202ENST00000488846 AXIN2Q9Y2T1 843 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms