RNA–Protein interactions for RNA: ENST00000488767.1

PHF1-210, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 849 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-210ENST00000488767 TRPM3Q9HCF6 1732 aaPredicted RBP18.06■□□□□ 0.48
PHF1-210ENST00000488767 TMC1Q8TDI8 760 aa18.05■□□□□ 0.48
PHF1-210ENST00000488767 RGS17Q9UGC6 210 aaPredicted RBP18.05■□□□□ 0.48
PHF1-210ENST00000488767 ABTB2Q8N961 1025 aa18.04■□□□□ 0.48
PHF1-210ENST00000488767 ILDR2Q71H61 639 aa18.03■□□□□ 0.48
PHF1-210ENST00000488767 HDGFL2Q7Z4V5 671 aaPredicted RBP18.03■□□□□ 0.48
PHF1-210ENST00000488767 CABLES1Q8TDN4 633 aa18.03■□□□□ 0.48
PHF1-210ENST00000488767 TESK2Q96S53 571 aa18.03■□□□□ 0.48
PHF1-210ENST00000488767 NINLQ9Y2I6 1382 aa18.03■□□□□ 0.48
PHF1-210ENST00000488767 ALS2Q96Q42 1657 aa18.03■□□□□ 0.48
PHF1-210ENST00000488767 USP6P35125 1406 aa18.02■□□□□ 0.48
PHF1-210ENST00000488767 TERF2IPQ9NYB0 399 aa18.02■□□□□ 0.48
PHF1-210ENST00000488767 USP21Q9UK80 565 aa18.02■□□□□ 0.48
PHF1-210ENST00000488767 EIF4G2P78344 907 aaKnown RBP eCLIP18.01■□□□□ 0.47
PHF1-210ENST00000488767 POTEAQ6S8J7 498 aa18.01■□□□□ 0.47
PHF1-210ENST00000488767 KTN1Q86UP2 1357 aaKnown RBP18.01■□□□□ 0.47
PHF1-210ENST00000488767 RXRBP28702 533 aa18■□□□□ 0.47
PHF1-210ENST00000488767 NLRP13Q86W25 1043 aa18■□□□□ 0.47
PHF1-210ENST00000488767 FNBP4Q8N3X1 1017 aaPredicted RBP18■□□□□ 0.47
PHF1-210ENST00000488767 QTRT2Q9H974 415 aaKnown RBP17.99■□□□□ 0.47
PHF1-210ENST00000488767 TRPC5Q9UL62 973 aaPredicted RBP17.99■□□□□ 0.47
PHF1-210ENST00000488767 MARF1Q9Y4F3 1742 aaKnown RBP17.98■□□□□ 0.47
PHF1-210ENST00000488767 NUTM2GQ5VZR2 741 aa17.98■□□□□ 0.47
PHF1-210ENST00000488767 TTC21AQ8NDW8 1320 aa17.98■□□□□ 0.47
PHF1-210ENST00000488767 NLRP6P59044 892 aa17.97■□□□□ 0.47
PHF1-210ENST00000488767 ABCA3Q99758 1704 aa17.96■□□□□ 0.47
PHF1-210ENST00000488767 SLC12A5Q9H2X9 1139 aa17.96■□□□□ 0.47
PHF1-210ENST00000488767 PRDM11Q9NQV5 511 aa17.96■□□□□ 0.47
PHF1-210ENST00000488767 CPSF1Q10570 1443 aaKnown RBP17.96■□□□□ 0.47
PHF1-210ENST00000488767 RBM6P78332 1123 aaKnown RBP17.95■□□□□ 0.46
PHF1-210ENST00000488767 TTC21BQ7Z4L5 1316 aa17.95■□□□□ 0.46
PHF1-210ENST00000488767 UNC5CLQ8IV45 518 aa17.94■□□□□ 0.46
PHF1-210ENST00000488767 SOCS7O14512 581 aa17.93■□□□□ 0.46
PHF1-210ENST00000488767 AKAP12Q02952 1782 aa17.93■□□□□ 0.46
PHF1-210ENST00000488767 EDC4Q6P2E9 1401 aaKnown RBP17.92■□□□□ 0.46
PHF1-210ENST00000488767 SSH2Q76I76 1423 aa17.92■□□□□ 0.46
PHF1-210ENST00000488767 FAM83GA6ND36 823 aa17.92■□□□□ 0.46
PHF1-210ENST00000488767 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.92■□□□□ 0.46
PHF1-210ENST00000488767 USP19O94966 1318 aa17.92■□□□□ 0.46
PHF1-210ENST00000488767 SLIT2O94813 1529 aa17.92■□□□□ 0.46
PHF1-210ENST00000488767 PHRF1Q9P1Y6 1649 aaKnown RBP17.91■□□□□ 0.46
PHF1-210ENST00000488767 BCL9LQ86UU0 1499 aa17.91■□□□□ 0.46
PHF1-210ENST00000488767 GCP02774 474 aa17.91■□□□□ 0.46
PHF1-210ENST00000488767 HSPA5P11021 654 aaKnown RBP17.91■□□□□ 0.46
PHF1-210ENST00000488767 ZC3H6P61129 1189 aaKnown RBP17.91■□□□□ 0.46
PHF1-210ENST00000488767 KCNH5Q8NCM2 988 aa17.91■□□□□ 0.46
PHF1-210ENST00000488767 CCDC9Q9Y3X0 531 aaKnown RBP17.91■□□□□ 0.46
PHF1-210ENST00000488767 COL14A1Q05707 1796 aaKnown RBP17.91■□□□□ 0.46
PHF1-210ENST00000488767 A0A1W2PP64 1363 aa17.91■□□□□ 0.46
PHF1-210ENST00000488767 KIAA0232Q92628 1395 aa17.91■□□□□ 0.46
PHF1-210ENST00000488767 ATRNO75882 1429 aa17.9■□□□□ 0.46
PHF1-210ENST00000488767 MON2Q7Z3U7 1717 aa17.9■□□□□ 0.46
PHF1-210ENST00000488767 BTG4Q9NY30 223 aa17.9■□□□□ 0.46
PHF1-210ENST00000488767 ANKRD36BQ8N2N9 1353 aa17.9■□□□□ 0.46
PHF1-210ENST00000488767 NWD2Q9ULI1 1742 aa17.89■□□□□ 0.46
PHF1-210ENST00000488767 CDK12Q9NYV4 1490 aaPredicted RBP17.89■□□□□ 0.45
PHF1-210ENST00000488767 POLR3GLQ9BT43 218 aa17.89■□□□□ 0.45
PHF1-210ENST00000488767 PLCH1Q4KWH8 1693 aa17.89■□□□□ 0.45
PHF1-210ENST00000488767 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.89■□□□□ 0.45
PHF1-210ENST00000488767 CRYBG1Q9Y4K1 1723 aa17.89■□□□□ 0.45
PHF1-210ENST00000488767 CD163L1Q9NR16 1453 aa17.88■□□□□ 0.45
PHF1-210ENST00000488767 NRKQ7Z2Y5 1582 aa17.88■□□□□ 0.45
PHF1-210ENST00000488767 GJD4Q96KN9 370 aaPredicted RBP17.88■□□□□ 0.45
PHF1-210ENST00000488767 CPDO75976 1380 aa17.88■□□□□ 0.45
PHF1-210ENST00000488767 PIK3C2AO00443 1686 aa17.87■□□□□ 0.45
PHF1-210ENST00000488767 VPS72Q15906 364 aa17.87■□□□□ 0.45
PHF1-210ENST00000488767 ZBTB7CA1YPR0 619 aa17.86■□□□□ 0.45
PHF1-210ENST00000488767 EVA1CP58658 441 aa17.86■□□□□ 0.45
PHF1-210ENST00000488767 CHRNA2Q15822 529 aa17.86■□□□□ 0.45
PHF1-210ENST00000488767 SLIT3O75094 1523 aa17.85■□□□□ 0.45
PHF1-210ENST00000488767 USP31Q70CQ4 1352 aa17.84■□□□□ 0.45
PHF1-210ENST00000488767 SOX12O15370 315 aa17.84■□□□□ 0.45
PHF1-210ENST00000488767 NME9Q86XW9 330 aa17.84■□□□□ 0.45
PHF1-210ENST00000488767 COG3Q96JB2 828 aa17.83■□□□□ 0.44
PHF1-210ENST00000488767 STRN4Q9NRL3 753 aa17.83■□□□□ 0.44
PHF1-210ENST00000488767 RGS12O14924 1447 aa17.81■□□□□ 0.44
PHF1-210ENST00000488767 A0A0G2JS52 829 aa17.81■□□□□ 0.44
PHF1-210ENST00000488767 MYT1Q01538 1121 aa17.81■□□□□ 0.44
PHF1-210ENST00000488767 AATKQ6ZMQ8 1374 aa17.8■□□□□ 0.44
PHF1-210ENST00000488767 NRAPQ86VF7 1730 aa17.78■□□□□ 0.44
PHF1-210ENST00000488767 ZRANB1Q9UGI0 708 aa17.78■□□□□ 0.44
PHF1-210ENST00000488767 USP54Q70EL1 1684 aa17.77■□□□□ 0.44
PHF1-210ENST00000488767 SPATA31A5Q5VU36 1347 aa17.77■□□□□ 0.44
PHF1-210ENST00000488767 SPATA31A7Q8IWB4 1347 aa17.77■□□□□ 0.44
PHF1-210ENST00000488767 ARHGEF25Q86VW2 580 aa17.77■□□□□ 0.44
PHF1-210ENST00000488767 OVOS2A0A0J9YW53 1432 aa17.77■□□□□ 0.44
PHF1-210ENST00000488767 OVOS2Q6IE36 1432 aa17.77■□□□□ 0.44
PHF1-210ENST00000488767 NSD3Q9BZ95 1437 aa17.77■□□□□ 0.44
PHF1-210ENST00000488767 MYOM1P52179 1685 aa17.77■□□□□ 0.43
PHF1-210ENST00000488767 GLI3P10071 1580 aa17.76■□□□□ 0.43
PHF1-210ENST00000488767 CGNL1Q0VF96 1302 aa17.75■□□□□ 0.43
PHF1-210ENST00000488767 LMO7Q8WWI1 1683 aa17.75■□□□□ 0.43
PHF1-210ENST00000488767 CAMTA1Q9Y6Y1 1673 aa17.75■□□□□ 0.43
PHF1-210ENST00000488767 CSB-PGBD3P0DP91 1061 aa17.75■□□□□ 0.43
PHF1-210ENST00000488767 FAM98CQ17RN3 349 aaKnown RBP17.75■□□□□ 0.43
PHF1-210ENST00000488767 SEPT12Q8IYM1 358 aa17.75■□□□□ 0.43
PHF1-210ENST00000488767 NFAT5O94916 1531 aa17.75■□□□□ 0.43
PHF1-210ENST00000488767 ABCC6O95255 1503 aa17.75■□□□□ 0.43
PHF1-210ENST00000488767 COL5A2P05997 1499 aaPredicted RBP17.75■□□□□ 0.43
PHF1-210ENST00000488767 GGNBP2Q9H3C7 697 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms