RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 PARP9Q8IXQ6 854 aa7.81□□□□□ -1.16
CD46-215ENST00000488596 PCDHB15Q9Y5E8 787 aa7.81□□□□□ -1.16
CD46-215ENST00000488596 TRIM66O15016 1216 aa7.8□□□□□ -1.16
CD46-215ENST00000488596 DESI1Q6ICB0 168 aa7.8□□□□□ -1.16
CD46-215ENST00000488596 WASF2Q9Y6W5 498 aa7.8□□□□□ -1.16
CD46-215ENST00000488596 SPDYE5A6NIY4 337 aa7.79□□□□□ -1.16
CD46-215ENST00000488596 RSBN1LQ6PCB5 846 aaPredicted RBP7.79□□□□□ -1.16
CD46-215ENST00000488596 TRIM46Q7Z4K8 759 aa7.79□□□□□ -1.16
CD46-215ENST00000488596 CFAP99D6REC4 459 aa7.78□□□□□ -1.16
CD46-215ENST00000488596 BMP1P13497 986 aa7.78□□□□□ -1.16
CD46-215ENST00000488596 ZNF511Q8NB15 262 aa7.78□□□□□ -1.16
CD46-215ENST00000488596 TLL2Q9Y6L7 1015 aa7.78□□□□□ -1.16
CD46-215ENST00000488596 SPTLC1O15269 473 aa7.77□□□□□ -1.17
CD46-215ENST00000488596 CAPN5O15484 640 aaPredicted RBP7.77□□□□□ -1.17
CD46-215ENST00000488596 HRCP23327 699 aa7.77□□□□□ -1.17
CD46-215ENST00000488596 GJA5P36382 358 aa7.77□□□□□ -1.17
CD46-215ENST00000488596 LYPD8Q6UX82 237 aa7.77□□□□□ -1.17
CD46-215ENST00000488596 CTHP32929 405 aa7.75□□□□□ -1.17
CD46-215ENST00000488596 DIXDC1Q155Q3 683 aa7.75□□□□□ -1.17
CD46-215ENST00000488596 AK7Q96M32 723 aa7.75□□□□□ -1.17
CD46-215ENST00000488596 VARSP26640 1264 aaKnown RBP7.74□□□□□ -1.17
CD46-215ENST00000488596 KCNMA1Q12791 1236 aa7.74□□□□□ -1.17
CD46-215ENST00000488596 RIC3Q7Z5B4 369 aa7.74□□□□□ -1.17
CD46-215ENST00000488596 CABLES1Q8TDN4 633 aa7.74□□□□□ -1.17
CD46-215ENST00000488596 ERBB4Q15303 1308 aa7.74□□□□□ -1.17
CD46-215ENST00000488596 CSPP1Q1MSJ5 1256 aa7.73□□□□□ -1.17
CD46-215ENST00000488596 MPNDQ8N594 471 aa7.73□□□□□ -1.17
CD46-215ENST00000488596 ZBTB3Q9H5J0 574 aa7.73□□□□□ -1.17
CD46-215ENST00000488596 MAP10Q9P2G4 905 aa7.73□□□□□ -1.17
CD46-215ENST00000488596 PLEKHG3A1L390 1219 aa7.72□□□□□ -1.17
CD46-215ENST00000488596 PER1O15534 1290 aaPredicted RBP7.72□□□□□ -1.17
CD46-215ENST00000488596 F12P00748 615 aaPredicted RBP7.72□□□□□ -1.17
CD46-215ENST00000488596 VEGFBP49765 207 aa7.72□□□□□ -1.17
CD46-215ENST00000488596 NNTQ13423 1086 aa7.72□□□□□ -1.17
CD46-215ENST00000488596 FOXJ1Q92949 421 aa7.72□□□□□ -1.17
CD46-215ENST00000488596 VSIG8P0DPA2 414 aa7.71□□□□□ -1.18
CD46-215ENST00000488596 QPCTQ16769 361 aa7.71□□□□□ -1.18
CD46-215ENST00000488596 PRPF38BQ5VTL8 546 aaKnown RBP7.71□□□□□ -1.18
CD46-215ENST00000488596 ZFP42Q96MM3 310 aa7.71□□□□□ -1.18
CD46-215ENST00000488596 LIMD1Q9UGP4 676 aa7.71□□□□□ -1.18
CD46-215ENST00000488596 PDE4DQ08499 809 aa7.7□□□□□ -1.18
CD46-215ENST00000488596 C4orf48Q5BLP8 95 aa7.7□□□□□ -1.18
CD46-215ENST00000488596 MYSM1Q5VVJ2 828 aa7.7□□□□□ -1.18
CD46-215ENST00000488596 TIMP2P16035 220 aa7.69□□□□□ -1.18
CD46-215ENST00000488596 WDR4P57081 412 aaKnown RBP7.69□□□□□ -1.18
CD46-215ENST00000488596 FAM174AQ8TBP5 190 aa7.69□□□□□ -1.18
CD46-215ENST00000488596 BCANQ96GW7 911 aa7.69□□□□□ -1.18
CD46-215ENST00000488596 CDK15Q96Q40 435 aa7.69□□□□□ -1.18
CD46-215ENST00000488596 KLF16Q9BXK1 252 aaPredicted RBP7.69□□□□□ -1.18
CD46-215ENST00000488596 ADH1CP00326 375 aa7.68□□□□□ -1.18
CD46-215ENST00000488596 SLC24A3Q9HC58 644 aa7.68□□□□□ -1.18
CD46-215ENST00000488596 LILRB3O75022 631 aa7.67□□□□□ -1.18
CD46-215ENST00000488596 ARID5BQ14865 1188 aa7.67□□□□□ -1.18
CD46-215ENST00000488596 MRPL14Q6P1L8 145 aaKnown RBP7.67□□□□□ -1.18
CD46-215ENST00000488596 KCTD17Q8N5Z5 321 aa7.67□□□□□ -1.18
CD46-215ENST00000488596 TSC1Q92574 1164 aa7.67□□□□□ -1.18
CD46-215ENST00000488596 PURBQ96QR8 312 aaKnown RBP7.67□□□□□ -1.18
CD46-215ENST00000488596 NUTM2BA6NNL0 878 aaPredicted RBP7.66□□□□□ -1.18
CD46-215ENST00000488596 NUTM2EB1AL46 878 aaPredicted RBP7.66□□□□□ -1.18
CD46-215ENST00000488596 GRM5P41594 1212 aa7.66□□□□□ -1.18
CD46-215ENST00000488596 GSK3AP49840 483 aa7.66□□□□□ -1.18
CD46-215ENST00000488596 NUTM2DQ5VT03 806 aaPredicted RBP7.66□□□□□ -1.18
CD46-215ENST00000488596 NUTM2AQ8IVF1 878 aaPredicted RBP7.66□□□□□ -1.18
CD46-215ENST00000488596 SOBPA7XYQ1 873 aa7.65□□□□□ -1.18
CD46-215ENST00000488596 NR3C2P08235 984 aa7.65□□□□□ -1.18
CD46-215ENST00000488596 AGERQ15109 404 aa7.65□□□□□ -1.18
CD46-215ENST00000488596 TUSC1Q2TAM9 212 aa7.65□□□□□ -1.18
CD46-215ENST00000488596 RTL5Q5HYW3 569 aaPredicted RBP7.65□□□□□ -1.18
CD46-215ENST00000488596 ZFAND3Q9H8U3 227 aa7.65□□□□□ -1.18
CD46-215ENST00000488596 ITPKCQ96DU7 683 aa7.64□□□□□ -1.19
CD46-215ENST00000488596 ZIC2O95409 532 aaPredicted RBP7.63□□□□□ -1.19
CD46-215ENST00000488596 NR5A1Q13285 461 aa7.63□□□□□ -1.19
CD46-215ENST00000488596 SCARF1Q14162 830 aa7.63□□□□□ -1.19
CD46-215ENST00000488596 BPHLQ86WA6 291 aaPredicted RBP7.63□□□□□ -1.19
CD46-215ENST00000488596 TMEM151AQ8N4L1 468 aa7.63□□□□□ -1.19
CD46-215ENST00000488596 RNF225M0QZC1 329 aaPredicted RBP7.62□□□□□ -1.19
CD46-215ENST00000488596 SH3RF1Q7Z6J0 888 aa7.62□□□□□ -1.19
CD46-215ENST00000488596 POLR3EQ9NVU0 708 aa7.61□□□□□ -1.19
CD46-215ENST00000488596 GDF11O95390 407 aa7.6□□□□□ -1.19
CD46-215ENST00000488596 CLK2P49760 499 aaKnown RBP7.6□□□□□ -1.19
CD46-215ENST00000488596 C6orf118Q5T5N4 469 aa7.6□□□□□ -1.19
CD46-215ENST00000488596 SH3BP5LQ7L8J4 393 aa7.6□□□□□ -1.19
CD46-215ENST00000488596 C1QTNF2Q9BXJ5 285 aa7.6□□□□□ -1.19
CD46-215ENST00000488596 RASSF7Q02833 373 aa7.59□□□□□ -1.19
CD46-215ENST00000488596 ARMC2Q8NEN0 867 aa7.59□□□□□ -1.19
CD46-215ENST00000488596 HELBQ8NG08 1087 aaPredicted RBP7.59□□□□□ -1.19
CD46-215ENST00000488596 CTDSPL2Q05D32 466 aa7.58□□□□□ -1.2
CD46-215ENST00000488596 FBXO31Q5XUX0 539 aaPredicted RBP7.58□□□□□ -1.2
CD46-215ENST00000488596 MAGEB6P1A0A0J9YX57 407 aa7.57□□□□□ -1.2
CD46-215ENST00000488596 FSHRP23945 695 aa7.57□□□□□ -1.2
CD46-215ENST00000488596 NBPF14Q5TI25 921 aa7.57□□□□□ -1.2
CD46-215ENST00000488596 BMP2P12643 396 aa7.56□□□□□ -1.2
CD46-215ENST00000488596 VASH1Q7L8A9 365 aaPredicted RBP7.56□□□□□ -1.2
CD46-215ENST00000488596 TRMT44Q8IYL2 757 aaKnown RBP7.56□□□□□ -1.2
CD46-215ENST00000488596 MEIOBQ8N635 442 aa7.56□□□□□ -1.2
CD46-215ENST00000488596 RSPH6AQ9H0K4 717 aa7.56□□□□□ -1.2
CD46-215ENST00000488596 MAP4K5Q9Y4K4 846 aa7.56□□□□□ -1.2
CD46-215ENST00000488596 MAN1A2O60476 641 aa7.55□□□□□ -1.2
CD46-215ENST00000488596 IGHA1P01876 353 aa7.55□□□□□ -1.2
CD46-215ENST00000488596 PRKCSHP14314 528 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms