RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 KDM4FA0A1W2PPD8 638 aa26.84■■□□□ 1.89
NECAB3-213ENST00000488489 NEFLP07196 543 aa26.84■■□□□ 1.89
NECAB3-213ENST00000488489 PMFBP1Q8TBY8 1022 aa26.83■■□□□ 1.88
NECAB3-213ENST00000488489 CDCA7LQ96GN5 454 aa26.82■■□□□ 1.88
NECAB3-213ENST00000488489 NALCNQ8IZF0 1738 aa26.81■■□□□ 1.88
NECAB3-213ENST00000488489 PDE3BQ13370 1112 aa26.81■■□□□ 1.88
NECAB3-213ENST00000488489 USP6P35125 1406 aa26.8■■□□□ 1.88
NECAB3-213ENST00000488489 APAF1O14727 1248 aa26.8■■□□□ 1.88
NECAB3-213ENST00000488489 NRKQ7Z2Y5 1582 aa26.8■■□□□ 1.88
NECAB3-213ENST00000488489 COL3A1P02461 1466 aaPredicted RBP26.8■■□□□ 1.88
NECAB3-213ENST00000488489 TTC21BQ7Z4L5 1316 aa26.8■■□□□ 1.88
NECAB3-213ENST00000488489 FMN2Q9NZ56 1722 aa26.79■■□□□ 1.88
NECAB3-213ENST00000488489 POLKQ9UBT6 870 aa26.78■■□□□ 1.88
NECAB3-213ENST00000488489 ANKARQ7Z5J8 1434 aa26.78■■□□□ 1.88
NECAB3-213ENST00000488489 PNPLA6Q8IY17 1366 aa26.77■■□□□ 1.88
NECAB3-213ENST00000488489 SSH2Q76I76 1423 aa26.77■■□□□ 1.88
NECAB3-213ENST00000488489 ZNF521Q96K83 1311 aa26.77■■□□□ 1.88
NECAB3-213ENST00000488489 COG3Q96JB2 828 aa26.77■■□□□ 1.88
NECAB3-213ENST00000488489 MAP2P11137 1827 aaKnown RBP26.76■■□□□ 1.88
NECAB3-213ENST00000488489 HSPA2P54652 639 aa26.76■■□□□ 1.87
NECAB3-213ENST00000488489 NWD1Q149M9 1564 aa26.74■■□□□ 1.87
NECAB3-213ENST00000488489 NGDNQ8NEJ9 315 aaKnown RBP26.74■■□□□ 1.87
NECAB3-213ENST00000488489 ADGRL3Q9HAR2 1447 aa26.73■■□□□ 1.87
NECAB3-213ENST00000488489 U2AF1L5P0DN76 240 aaPredicted RBP26.73■■□□□ 1.87
NECAB3-213ENST00000488489 IRX6P78412 446 aaPredicted RBP26.73■■□□□ 1.87
NECAB3-213ENST00000488489 U2AF1Q01081 240 aaKnown RBP eCLIP26.73■■□□□ 1.872e-6■■□□□ 12.5
NECAB3-213ENST00000488489 EMILIN1Q9Y6C2 1016 aa26.72■■□□□ 1.87
NECAB3-213ENST00000488489 AATKQ6ZMQ8 1374 aa26.72■■□□□ 1.87
NECAB3-213ENST00000488489 PPM1GO15355 546 aaPredicted RBP26.71■■□□□ 1.87
NECAB3-213ENST00000488489 RUNDC1Q96C34 613 aa26.71■■□□□ 1.87
NECAB3-213ENST00000488489 DIAPH1O60610 1272 aaKnown RBP26.69■■□□□ 1.86
NECAB3-213ENST00000488489 OVOS2A0A0J9YW53 1432 aa26.69■■□□□ 1.86
NECAB3-213ENST00000488489 OVOS2Q6IE36 1432 aa26.69■■□□□ 1.86
NECAB3-213ENST00000488489 U2SURPO15042 1029 aaKnown RBP26.68■■□□□ 1.86
NECAB3-213ENST00000488489 RRS1Q15050 365 aaKnown RBP26.68■■□□□ 1.86
NECAB3-213ENST00000488489 TCP11L2Q8N4U5 519 aa26.66■■□□□ 1.86
NECAB3-213ENST00000488489 IQSEC2Q5JU85 1478 aa26.66■■□□□ 1.86
NECAB3-213ENST00000488489 RNF123Q5XPI4 1314 aa26.66■■□□□ 1.86
NECAB3-213ENST00000488489 C14orf37Q86TY3 774 aa26.66■■□□□ 1.86
NECAB3-213ENST00000488489 PROSER2Q86WR7 435 aaPredicted RBP26.66■■□□□ 1.86
NECAB3-213ENST00000488489 TTC21AQ8NDW8 1320 aa26.66■■□□□ 1.86
NECAB3-213ENST00000488489 GOLGA2Q08379 1002 aa26.65■■□□□ 1.86
NECAB3-213ENST00000488489 LMTK3Q96Q04 1460 aa26.64■■□□□ 1.86
NECAB3-213ENST00000488489 NGEFQ8N5V2 710 aa26.64■■□□□ 1.86
NECAB3-213ENST00000488489 RRP7AQ9Y3A4 280 aaKnown RBP26.64■■□□□ 1.86
NECAB3-213ENST00000488489 PHF8Q9UPP1 1060 aa26.63■■□□□ 1.85
NECAB3-213ENST00000488489 PLEKHF1Q96S99 279 aa26.63■■□□□ 1.85
NECAB3-213ENST00000488489 SPINK5Q9NQ38 1064 aaPredicted RBP26.63■■□□□ 1.85
NECAB3-213ENST00000488489 DMRT2Q9Y5R5 561 aa26.63■■□□□ 1.85
NECAB3-213ENST00000488489 NEUROD2Q15784 382 aa26.62■■□□□ 1.85
NECAB3-213ENST00000488489 DUSP27Q5VZP5 1158 aa26.62■■□□□ 1.85
NECAB3-213ENST00000488489 CDK12Q9NYV4 1490 aaPredicted RBP26.62■■□□□ 1.85
NECAB3-213ENST00000488489 STRCP1A6NGW2 1772 aa26.61■■□□□ 1.85
NECAB3-213ENST00000488489 USP31Q70CQ4 1352 aa26.61■■□□□ 1.85
NECAB3-213ENST00000488489 WWC1Q8IX03 1113 aa26.61■■□□□ 1.85
NECAB3-213ENST00000488489 SLFN5Q08AF3 891 aa26.6■■□□□ 1.85
NECAB3-213ENST00000488489 RCAN3Q9UKA8 241 aa26.6■■□□□ 1.85
NECAB3-213ENST00000488489 PIK3C2AO00443 1686 aa26.6■■□□□ 1.85
NECAB3-213ENST00000488489 ESCO1Q5FWF5 840 aa26.59■■□□□ 1.85
NECAB3-213ENST00000488489 PHF23Q9BUL5 403 aaPredicted RBP26.59■■□□□ 1.85
NECAB3-213ENST00000488489 IL13P35225 146 aa26.59■■□□□ 1.85
NECAB3-213ENST00000488489 TRMT2AQ8IZ69 625 aaKnown RBP26.59■■□□□ 1.85
NECAB3-213ENST00000488489 SOX12O15370 315 aa26.56■■□□□ 1.84
NECAB3-213ENST00000488489 ORAI2Q96SN7 254 aa26.56■■□□□ 1.84
NECAB3-213ENST00000488489 ANP32EQ9BTT0 268 aa26.56■■□□□ 1.84
NECAB3-213ENST00000488489 STRCQ7RTU9 1775 aa26.55■■□□□ 1.84
NECAB3-213ENST00000488489 C19orf44Q9H6X5 657 aa26.55■■□□□ 1.84
NECAB3-213ENST00000488489 TMEM94Q12767 1356 aa26.54■■□□□ 1.84
NECAB3-213ENST00000488489 NLRP6P59044 892 aa26.54■■□□□ 1.84
NECAB3-213ENST00000488489 FCHSD2O94868 740 aa26.53■■□□□ 1.84
NECAB3-213ENST00000488489 PAK3O75914 559 aaPredicted RBP26.53■■□□□ 1.84
NECAB3-213ENST00000488489 CCDC27Q2M243 656 aa26.53■■□□□ 1.84
NECAB3-213ENST00000488489 NUTM2GQ5VZR2 741 aa26.53■■□□□ 1.84
NECAB3-213ENST00000488489 RSPH6AQ9H0K4 717 aa26.53■■□□□ 1.84
NECAB3-213ENST00000488489 E9PSI1 815 aa26.52■■□□□ 1.84
NECAB3-213ENST00000488489 PEAK1Q9H792 1746 aa26.52■■□□□ 1.84
NECAB3-213ENST00000488489 NCBP3Q53F19 620 aaKnown RBP26.51■■□□□ 1.84
NECAB3-213ENST00000488489 ABTB2Q8N961 1025 aa26.51■■□□□ 1.84
NECAB3-213ENST00000488489 LRRC7Q96NW7 1537 aa26.51■■□□□ 1.83
NECAB3-213ENST00000488489 MARF1Q9Y4F3 1742 aaKnown RBP26.51■■□□□ 1.83
NECAB3-213ENST00000488489 HMOX1P09601 288 aa26.5■■□□□ 1.83
NECAB3-213ENST00000488489 TMPOP42166 694 aaKnown RBP26.5■■□□□ 1.83
NECAB3-213ENST00000488489 ERICH6BQ5W0A0 696 aa26.5■■□□□ 1.83
NECAB3-213ENST00000488489 RRP1P56182 461 aaKnown RBP26.5■■□□□ 1.83
NECAB3-213ENST00000488489 MAP3K19Q56UN5 1328 aa26.5■■□□□ 1.83
NECAB3-213ENST00000488489 MAPK8IP3Q9UPT6 1336 aa26.5■■□□□ 1.83
NECAB3-213ENST00000488489 PSME1Q06323 249 aa26.49■■□□□ 1.83
NECAB3-213ENST00000488489 HSP90AB2PQ58FF8 381 aa26.49■■□□□ 1.83
NECAB3-213ENST00000488489 PRKAR2BP31323 418 aa26.48■■□□□ 1.83
NECAB3-213ENST00000488489 FOXO3O43524 673 aa26.48■■□□□ 1.83
NECAB3-213ENST00000488489 PNNQ9H307 717 aaKnown RBP26.48■■□□□ 1.83
NECAB3-213ENST00000488489 EIF4A2Q14240 407 aaKnown RBP26.47■■□□□ 1.83
NECAB3-213ENST00000488489 RBM19Q9Y4C8 960 aaKnown RBP26.47■■□□□ 1.83
NECAB3-213ENST00000488489 C1orf167Q5SNV9 1468 aa26.47■■□□□ 1.83
NECAB3-213ENST00000488489 WDR63Q8IWG1 891 aa26.47■■□□□ 1.83
NECAB3-213ENST00000488489 USP54Q70EL1 1684 aa26.46■■□□□ 1.83
NECAB3-213ENST00000488489 TRIM35Q9UPQ4 493 aa26.46■■□□□ 1.83
NECAB3-213ENST00000488489 PHACTR3Q96KR7 559 aa26.45■■□□□ 1.83
NECAB3-213ENST00000488489 NCOA3Q9Y6Q9 1424 aa26.44■■□□□ 1.82
NECAB3-213ENST00000488489 XPCQ01831 940 aaPredicted RBP26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms