RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 RILPL2Q969X0 211 aa14.39□□□□□ -0.11
LDLRAP1-207ENST00000488127 THUMPD2Q9BTF0 503 aaKnown RBP14.39□□□□□ -0.11
LDLRAP1-207ENST00000488127 DDX19BQ9UMR2 479 aa14.39□□□□□ -0.11
LDLRAP1-207ENST00000488127 KLHL34Q8N239 644 aa14.39□□□□□ -0.11
LDLRAP1-207ENST00000488127 FOXD4L1Q9NU39 408 aa14.38□□□□□ -0.11
LDLRAP1-207ENST00000488127 SMG6Q86US8 1419 aaKnown RBP14.38□□□□□ -0.11
LDLRAP1-207ENST00000488127 ZMYM3Q14202 1370 aa14.38□□□□□ -0.11
LDLRAP1-207ENST00000488127 TNNT3P45378 269 aaPredicted RBP14.38□□□□□ -0.11
LDLRAP1-207ENST00000488127 BRPF3Q9ULD4 1205 aa14.38□□□□□ -0.11
LDLRAP1-207ENST00000488127 NOL8Q76FK4 1167 aaKnown RBP14.38□□□□□ -0.11
LDLRAP1-207ENST00000488127 TWISTNBQ3B726 338 aaPredicted RBP14.37□□□□□ -0.11
LDLRAP1-207ENST00000488127 NFKBIBQ15653 356 aa14.37□□□□□ -0.11
LDLRAP1-207ENST00000488127 KIF16BQ96L93 1317 aa14.36□□□□□ -0.11
LDLRAP1-207ENST00000488127 CABP4P57796 275 aa14.36□□□□□ -0.11
LDLRAP1-207ENST00000488127 DCTN1Q14203 1278 aa14.36□□□□□ -0.11
LDLRAP1-207ENST00000488127 KRT28Q7Z3Y7 464 aa14.36□□□□□ -0.11
LDLRAP1-207ENST00000488127 MIS18AQ9NYP9 233 aa14.36□□□□□ -0.11
LDLRAP1-207ENST00000488127 ITSN2Q9NZM3 1697 aa14.36□□□□□ -0.11
LDLRAP1-207ENST00000488127 TOMM22Q9NS69 142 aa14.35□□□□□ -0.11
LDLRAP1-207ENST00000488127 ACEP12821 1306 aa14.35□□□□□ -0.11
LDLRAP1-207ENST00000488127 HDGFL1Q5TGJ6 251 aa14.35□□□□□ -0.11
LDLRAP1-207ENST00000488127 KCNH5Q8NCM2 988 aa14.35□□□□□ -0.11
LDLRAP1-207ENST00000488127 NCKAP5LQ9HCH0 1330 aa14.35□□□□□ -0.11
LDLRAP1-207ENST00000488127 DISP3Q9P2K9 1392 aa14.35□□□□□ -0.11
LDLRAP1-207ENST00000488127 DDX11L8A8MPP1 907 aa14.35□□□□□ -0.11
LDLRAP1-207ENST00000488127 CENPQQ7L2Z9 268 aaPredicted RBP14.35□□□□□ -0.11
LDLRAP1-207ENST00000488127 BCAR3O75815 825 aa14.34□□□□□ -0.11
LDLRAP1-207ENST00000488127 SCAF11Q99590 1463 aaKnown RBP14.34□□□□□ -0.11
LDLRAP1-207ENST00000488127 CHRNA2Q15822 529 aa14.34□□□□□ -0.11
LDLRAP1-207ENST00000488127 SYAP1Q96A49 352 aaPredicted RBP14.34□□□□□ -0.11
LDLRAP1-207ENST00000488127 SLC4A2P04920 1241 aa14.33□□□□□ -0.11
LDLRAP1-207ENST00000488127 CADPS2Q86UW7 1296 aa14.33□□□□□ -0.11
LDLRAP1-207ENST00000488127 PKNOX2Q96KN3 472 aa14.33□□□□□ -0.11
LDLRAP1-207ENST00000488127 CFAP44Q96MT7 982 aa14.33□□□□□ -0.12
LDLRAP1-207ENST00000488127 SPG7Q9UQ90 795 aa14.33□□□□□ -0.12
LDLRAP1-207ENST00000488127 RIMS2Q9UQ26 1411 aa14.33□□□□□ -0.12
LDLRAP1-207ENST00000488127 MCM10Q7L590 875 aa14.33□□□□□ -0.12
LDLRAP1-207ENST00000488127 FAM13BQ9NYF5 915 aa14.33□□□□□ -0.12
LDLRAP1-207ENST00000488127 DMRT2Q9Y5R5 561 aa14.33□□□□□ -0.12
LDLRAP1-207ENST00000488127 CCDC30Q5VVM6 783 aa14.33□□□□□ -0.12
LDLRAP1-207ENST00000488127 LNPKQ9C0E8 428 aa14.33□□□□□ -0.12
LDLRAP1-207ENST00000488127 FCHSD2O94868 740 aa14.32□□□□□ -0.12
LDLRAP1-207ENST00000488127 MYL6BP14649 208 aa14.32□□□□□ -0.12
LDLRAP1-207ENST00000488127 TCOF1Q13428 1488 aaKnown RBP14.31□□□□□ -0.12
LDLRAP1-207ENST00000488127 KCNA6P17658 529 aa14.31□□□□□ -0.12
LDLRAP1-207ENST00000488127 DDX49Q9Y6V7 483 aaKnown RBP14.31□□□□□ -0.12
LDLRAP1-207ENST00000488127 PTCD1O75127 700 aaKnown RBP14.31□□□□□ -0.12
LDLRAP1-207ENST00000488127 G3BP1Q13283 466 aaKnown RBP eCLIP14.31□□□□□ -0.12
LDLRAP1-207ENST00000488127 TMPOP42166 694 aaKnown RBP14.31□□□□□ -0.12
LDLRAP1-207ENST00000488127 C1orf115Q9H7X2 142 aa14.31□□□□□ -0.12
LDLRAP1-207ENST00000488127 UBTFL1P0CB47 393 aaPredicted RBP14.3□□□□□ -0.12
LDLRAP1-207ENST00000488127 NGLY1Q96IV0 654 aa14.3□□□□□ -0.12
LDLRAP1-207ENST00000488127 IFIT2P09913 472 aaKnown RBP14.3□□□□□ -0.12
LDLRAP1-207ENST00000488127 UBAP1LF5GYI3 381 aa14.29□□□□□ -0.12
LDLRAP1-207ENST00000488127 NEUROD6Q96NK8 337 aa14.29□□□□□ -0.12
LDLRAP1-207ENST00000488127 ZRANB1Q9UGI0 708 aa14.28□□□□□ -0.12
LDLRAP1-207ENST00000488127 NOB1Q9ULX3 412 aaKnown RBP14.28□□□□□ -0.12
LDLRAP1-207ENST00000488127 NFE2L2Q16236 605 aa14.28□□□□□ -0.12
LDLRAP1-207ENST00000488127 BTBD11A6QL63 1104 aa14.28□□□□□ -0.12
LDLRAP1-207ENST00000488127 FAM43AQ8N2R8 423 aa14.28□□□□□ -0.12
LDLRAP1-207ENST00000488127 GNL2Q13823 731 aaKnown RBP14.27□□□□□ -0.12
LDLRAP1-207ENST00000488127 VPS37DQ86XT2 251 aa14.27□□□□□ -0.12
LDLRAP1-207ENST00000488127 WWC1Q8IX03 1113 aa14.27□□□□□ -0.12
LDLRAP1-207ENST00000488127 CABLES1Q8TDN4 633 aa14.27□□□□□ -0.12
LDLRAP1-207ENST00000488127 MAGI3Q5TCQ9 1506 aa14.27□□□□□ -0.12
LDLRAP1-207ENST00000488127 MAPKBP1O60336 1514 aa14.27□□□□□ -0.13
LDLRAP1-207ENST00000488127 MPRIPQ6WCQ1 1025 aa14.27□□□□□ -0.13
LDLRAP1-207ENST00000488127 SAMD9Q5K651 1589 aa14.26□□□□□ -0.13
LDLRAP1-207ENST00000488127 HSP90B1P14625 803 aaKnown RBP14.26□□□□□ -0.13
LDLRAP1-207ENST00000488127 FBXW7Q969H0 707 aa14.26□□□□□ -0.13
LDLRAP1-207ENST00000488127 CFAP65Q6ZU64 1925 aaKnown RBP14.26□□□□□ -0.13
LDLRAP1-207ENST00000488127 GNAT3A8MTJ3 354 aa14.26□□□□□ -0.13
LDLRAP1-207ENST00000488127 HSP90AB2PQ58FF8 381 aa14.26□□□□□ -0.13
LDLRAP1-207ENST00000488127 CFAP43Q8NDM7 1665 aa14.25□□□□□ -0.13
LDLRAP1-207ENST00000488127 DIAPH3Q9NSV4 1193 aa14.25□□□□□ -0.13
LDLRAP1-207ENST00000488127 ATP10AO60312 1499 aa14.25□□□□□ -0.13
LDLRAP1-207ENST00000488127 YEATS2Q9ULM3 1422 aa14.25□□□□□ -0.13
LDLRAP1-207ENST00000488127 MSH6P52701 1360 aa14.25□□□□□ -0.13
LDLRAP1-207ENST00000488127 FYB1O15117 783 aa14.25□□□□□ -0.13
LDLRAP1-207ENST00000488127 SURF6O75683 361 aaKnown RBP14.25□□□□□ -0.13
LDLRAP1-207ENST00000488127 SKOR2Q2VWA4 1001 aaPredicted RBP14.25□□□□□ -0.13
LDLRAP1-207ENST00000488127 PPP1R1BQ9UD71 204 aaPredicted RBP14.24□□□□□ -0.13
LDLRAP1-207ENST00000488127 FOXD4L5Q5VV16 416 aaPredicted RBP14.24□□□□□ -0.13
LDLRAP1-207ENST00000488127 WDR63Q8IWG1 891 aa14.24□□□□□ -0.13
LDLRAP1-207ENST00000488127 FOXD4L4Q8WXT5 416 aaPredicted RBP14.24□□□□□ -0.13
LDLRAP1-207ENST00000488127 PRAG1Q86YV5 1406 aa14.24□□□□□ -0.13
LDLRAP1-207ENST00000488127 ATP7AQ04656 1500 aa14.23□□□□□ -0.13
LDLRAP1-207ENST00000488127 KIF6Q6ZMV9 814 aa14.23□□□□□ -0.13
LDLRAP1-207ENST00000488127 TTC21BQ7Z4L5 1316 aa14.22□□□□□ -0.13
LDLRAP1-207ENST00000488127 APPP05067 770 aa14.22□□□□□ -0.13
LDLRAP1-207ENST00000488127 CHMP5Q9NZZ3 219 aa14.22□□□□□ -0.13
LDLRAP1-207ENST00000488127 SHANK2Q9UPX8 1470 aa14.22□□□□□ -0.13
LDLRAP1-207ENST00000488127 A0A0U1RQG5 324 aaPredicted RBP14.22□□□□□ -0.13
LDLRAP1-207ENST00000488127 GNAI3P08754 354 aa14.22□□□□□ -0.13
LDLRAP1-207ENST00000488127 C19orf44Q9H6X5 657 aa14.21□□□□□ -0.13
LDLRAP1-207ENST00000488127 KAT6BQ8WYB5 2073 aa14.21□□□□□ -0.13
LDLRAP1-207ENST00000488127 SF3B2Q13435 895 aaKnown RBP14.21□□□□□ -0.13
LDLRAP1-207ENST00000488127 TESK2Q96S53 571 aa14.21□□□□□ -0.13
LDLRAP1-207ENST00000488127 ERCC6L2Q5T890 1561 aa14.21□□□□□ -0.13
LDLRAP1-207ENST00000488127 PZPP20742 1482 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms