RNA–Protein interactions for RNA: ENST00000487846.1

TNIK-213, Transcript of TRAF2 and NCK interacting kinase, humanhuman

TSL 4

Gene TNIK, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIK-213ENST00000487846 PROX2Q3B8N5 592 aa9.52□□□□□ -0.89
TNIK-213ENST00000487846 KCTD12Q96CX2 325 aaKnown RBP9.52□□□□□ -0.89
TNIK-213ENST00000487846 PHLDB3Q6NSJ2 640 aa9.51□□□□□ -0.89
TNIK-213ENST00000487846 SSFA2P28290 1259 aa9.5□□□□□ -0.89
TNIK-213ENST00000487846 EIF4G2P78344 907 aaKnown RBP eCLIP9.5□□□□□ -0.89
TNIK-213ENST00000487846 KANK4Q5T7N3 995 aaPredicted RBP9.5□□□□□ -0.89
TNIK-213ENST00000487846 FAM198AQ9UFP1 575 aa9.5□□□□□ -0.89
TNIK-213ENST00000487846 ZMIZ1Q9ULJ6 1067 aa9.5□□□□□ -0.89
TNIK-213ENST00000487846 NOVA2Q9UNW9 492 aaKnown RBP9.5□□□□□ -0.89
TNIK-213ENST00000487846 RCCD1A6NED2 376 aa9.49□□□□□ -0.89
TNIK-213ENST00000487846 DDX11L8A8MPP1 907 aa9.49□□□□□ -0.89
TNIK-213ENST00000487846 STK32AQ8WU08 396 aa9.49□□□□□ -0.89
TNIK-213ENST00000487846 TSKSQ9UJT2 592 aa9.49□□□□□ -0.89
TNIK-213ENST00000487846 TRIM6-TRIM34B2RNG4 842 aa9.48□□□□□ -0.89
TNIK-213ENST00000487846 PRSS12P56730 875 aa9.48□□□□□ -0.89
TNIK-213ENST00000487846 USP46P62068 366 aa9.48□□□□□ -0.89
TNIK-213ENST00000487846 CTDSPL2Q05D32 466 aa9.48□□□□□ -0.89
TNIK-213ENST00000487846 NOM1Q5C9Z4 860 aaKnown RBP9.47□□□□□ -0.89
TNIK-213ENST00000487846 NPAS4Q8IUM7 802 aa9.47□□□□□ -0.89
TNIK-213ENST00000487846 ANKRD13AQ8IZ07 590 aa9.47□□□□□ -0.89
TNIK-213ENST00000487846 CDCA7LQ96GN5 454 aa9.47□□□□□ -0.89
TNIK-213ENST00000487846 RABGEF1Q9UJ41 708 aa9.47□□□□□ -0.89
TNIK-213ENST00000487846 ANKRD33BA6NCL7 494 aa9.46□□□□□ -0.9
TNIK-213ENST00000487846 C3orf80F5H4A9 247 aa9.46□□□□□ -0.9
TNIK-213ENST00000487846 KDM4AO75164 1064 aa9.46□□□□□ -0.9
TNIK-213ENST00000487846 RGS20O76081 388 aa9.46□□□□□ -0.9
TNIK-213ENST00000487846 NFATC2IPQ8NCF5 419 aa9.46□□□□□ -0.9
TNIK-213ENST00000487846 STAC3Q96MF2 364 aa9.46□□□□□ -0.9
TNIK-213ENST00000487846 BIN2Q9UBW5 565 aaPredicted RBP9.46□□□□□ -0.9
TNIK-213ENST00000487846 POLR3GLQ9BT43 218 aa9.45□□□□□ -0.9
TNIK-213ENST00000487846 KIAA1468Q9P260 1216 aa9.45□□□□□ -0.9
TNIK-213ENST00000487846 FAM196BA6NMK8 535 aa9.44□□□□□ -0.9
TNIK-213ENST00000487846 FDX1P10109 184 aa9.44□□□□□ -0.9
TNIK-213ENST00000487846 NAALADL2Q58DX5 795 aa9.44□□□□□ -0.9
TNIK-213ENST00000487846 LRRN4Q8WUT4 740 aa9.44□□□□□ -0.9
TNIK-213ENST00000487846 CLP1Q92989 425 aaKnown RBP9.44□□□□□ -0.9
TNIK-213ENST00000487846 DNAJB2P25686 324 aa9.43□□□□□ -0.9
TNIK-213ENST00000487846 PPP1R1BQ9UD71 204 aaPredicted RBP9.43□□□□□ -0.9
TNIK-213ENST00000487846 CADPSQ9ULU8 1353 aa9.42□□□□□ -0.9
TNIK-213ENST00000487846 SERPINB4P48594 390 aa9.42□□□□□ -0.9
TNIK-213ENST00000487846 MTMR2Q13614 643 aa9.42□□□□□ -0.9
TNIK-213ENST00000487846 USP17L3A6NCW0 530 aa9.41□□□□□ -0.9
TNIK-213ENST00000487846 USP17L4A6NCW7 530 aa9.41□□□□□ -0.9
TNIK-213ENST00000487846 HOXA2O43364 376 aa9.41□□□□□ -0.9
TNIK-213ENST00000487846 IFFO2Q5TF58 517 aa9.41□□□□□ -0.9
TNIK-213ENST00000487846 USP17L2Q6R6M4 530 aa9.41□□□□□ -0.9
TNIK-213ENST00000487846 USP17L1Q7RTZ2 530 aa9.41□□□□□ -0.9
TNIK-213ENST00000487846 PLEKHM2Q8IWE5 1019 aa9.41□□□□□ -0.9
TNIK-213ENST00000487846 SLF2Q8IX21 1173 aa9.41□□□□□ -0.9
TNIK-213ENST00000487846 TSC1Q92574 1164 aa9.41□□□□□ -0.9
TNIK-213ENST00000487846 EYA1Q99502 592 aa9.41□□□□□ -0.9
TNIK-213ENST00000487846 PTPN5P54829 565 aa9.4□□□□□ -0.9
TNIK-213ENST00000487846 USP17L15C9J2P7 530 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 USP17L10C9JJH3 530 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 USP17L13C9JLJ4 530 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 USP17L12C9JPN9 530 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 USP17L11C9JVI0 530 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 USP17L21D6R901 530 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 USP17L18D6R9N7 530 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 USP17L22D6RA61 530 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 USP17L17D6RBQ6 530 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 USP17L19D6RCP7 530 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 USP17L20D6RJB6 530 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 RECKO95980 971 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 ATP2B4P23634 1241 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 USP17L24Q0WX57 530 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 LARP1Q6PKG0 1096 aaKnown RBP9.39□□□□□ -0.91
TNIK-213ENST00000487846 LAPTM4BQ86VI4 370 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 PACS2Q86VP3 889 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 RDH13Q8NBN7 331 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 FAM200AQ8TCP9 573 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 NBPF3Q9H094 633 aa9.39□□□□□ -0.91
TNIK-213ENST00000487846 THSD4Q6ZMP0 1018 aa9.38□□□□□ -0.91
TNIK-213ENST00000487846 TATDN2Q93075 761 aa9.38□□□□□ -0.91
TNIK-213ENST00000487846 ANKRD62A6NC57 917 aa9.37□□□□□ -0.91
TNIK-213ENST00000487846 USP17L5A8MUK1 530 aa9.37□□□□□ -0.91
TNIK-213ENST00000487846 NR1H3Q13133 447 aa9.37□□□□□ -0.91
TNIK-213ENST00000487846 Q6ZNB5 142 aa9.37□□□□□ -0.91
TNIK-213ENST00000487846 FBXO33Q7Z6M2 555 aa9.37□□□□□ -0.91
TNIK-213ENST00000487846 MRPL50Q8N5N7 158 aaKnown RBP9.37□□□□□ -0.91
TNIK-213ENST00000487846 EPS8L1Q8TE68 723 aa9.37□□□□□ -0.91
TNIK-213ENST00000487846 CDCA7Q9BWT1 371 aaPredicted RBP9.37□□□□□ -0.91
TNIK-213ENST00000487846 TMEM134Q9H6X4 195 aa9.37□□□□□ -0.91
TNIK-213ENST00000487846 SEPT9Q9UHD8 586 aaPredicted RBP9.37□□□□□ -0.91
TNIK-213ENST00000487846 SWI5Q1ZZU3 235 aa9.36□□□□□ -0.91
TNIK-213ENST00000487846 C1orf216Q8TAB5 229 aa9.36□□□□□ -0.91
TNIK-213ENST00000487846 CWC22Q9HCG8 908 aaKnown RBP9.36□□□□□ -0.91
TNIK-213ENST00000487846 EGFL7Q9UHF1 273 aa9.36□□□□□ -0.91
TNIK-213ENST00000487846 SMAPO00193 183 aa9.35□□□□□ -0.91
TNIK-213ENST00000487846 SKIP12755 728 aa9.35□□□□□ -0.91
TNIK-213ENST00000487846 ERCC5P28715 1186 aaPredicted RBP9.35□□□□□ -0.91
TNIK-213ENST00000487846 FAM69CQ0P6D2 419 aa9.35□□□□□ -0.91
TNIK-213ENST00000487846 COL19A1Q14993 1142 aa9.35□□□□□ -0.91
TNIK-213ENST00000487846 FAM98CQ17RN3 349 aaKnown RBP9.35□□□□□ -0.91
TNIK-213ENST00000487846 NUDT18Q6ZVK8 323 aa9.35□□□□□ -0.91
TNIK-213ENST00000487846 SLAIN2Q9P270 581 aa9.35□□□□□ -0.91
TNIK-213ENST00000487846 PNMA3Q9UL41 463 aa9.35□□□□□ -0.91
TNIK-213ENST00000487846 PCDHGC3Q9UN70 934 aa9.35□□□□□ -0.91
TNIK-213ENST00000487846 NBPF26B4DH59 902 aa9.34□□□□□ -0.91
TNIK-213ENST00000487846 LZTS3O60299 673 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms