RNA–Protein interactions for RNA: ENST00000487701.1

SEC22C-215, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-215ENST00000487701 ZC3H15Q8WU90 426 aaKnown RBP10.23□□□□□ -0.77
SEC22C-215ENST00000487701 MTRQ99707 1265 aa10.23□□□□□ -0.77
SEC22C-215ENST00000487701 IRX2Q9BZI1 471 aaPredicted RBP10.23□□□□□ -0.77
SEC22C-215ENST00000487701 ADGRL1O94910 1474 aa10.23□□□□□ -0.77
SEC22C-215ENST00000487701 ABCC1P33527 1531 aa10.23□□□□□ -0.77
SEC22C-215ENST00000487701 MAP3K1Q13233 1512 aa10.23□□□□□ -0.77
SEC22C-215ENST00000487701 SAMD9LQ8IVG5 1584 aa10.22□□□□□ -0.77
SEC22C-215ENST00000487701 KMT5BQ4FZB7 885 aa10.22□□□□□ -0.77
SEC22C-215ENST00000487701 RSPH4AQ5TD94 716 aa10.22□□□□□ -0.77
SEC22C-215ENST00000487701 RDH13Q8NBN7 331 aa10.22□□□□□ -0.77
SEC22C-215ENST00000487701 BCANQ96GW7 911 aa10.22□□□□□ -0.77
SEC22C-215ENST00000487701 DAXXQ9UER7 740 aaPredicted RBP10.22□□□□□ -0.77
SEC22C-215ENST00000487701 MTUS2Q5JR59 1369 aa10.22□□□□□ -0.77
SEC22C-215ENST00000487701 ZMYM4Q5VZL5 1548 aa10.22□□□□□ -0.77
SEC22C-215ENST00000487701 ARHGEF40Q8TER5 1519 aa10.22□□□□□ -0.77
SEC22C-215ENST00000487701 DDX11L8A8MPP1 907 aa10.21□□□□□ -0.77
SEC22C-215ENST00000487701 RAPGEF3O95398 923 aa10.21□□□□□ -0.77
SEC22C-215ENST00000487701 DENND4BO75064 1496 aaPredicted RBP10.21□□□□□ -0.78
SEC22C-215ENST00000487701 LRRC9Q6ZRR7 1453 aa10.21□□□□□ -0.78
SEC22C-215ENST00000487701 GPATCH8Q9UKJ3 1502 aaKnown RBP10.21□□□□□ -0.78
SEC22C-215ENST00000487701 SIGLEC1Q9BZZ2 1709 aa10.21□□□□□ -0.78
SEC22C-215ENST00000487701 SLC10A3P09131 477 aa10.2□□□□□ -0.78
SEC22C-215ENST00000487701 COPS2P61201 443 aa10.2□□□□□ -0.78
SEC22C-215ENST00000487701 POGZQ7Z3K3 1410 aa10.2□□□□□ -0.78
SEC22C-215ENST00000487701 KDM5CP41229 1560 aa10.19□□□□□ -0.78
SEC22C-215ENST00000487701 ARHGEF12Q9NZN5 1544 aa10.19□□□□□ -0.78
SEC22C-215ENST00000487701 NCOA2Q15596 1464 aa10.19□□□□□ -0.78
SEC22C-215ENST00000487701 TJAP1Q5JTD0 557 aa10.19□□□□□ -0.78
SEC22C-215ENST00000487701 IL21Q9HBE4 155 aa10.19□□□□□ -0.78
SEC22C-215ENST00000487701 PCDHB3Q9Y5E6 796 aa10.19□□□□□ -0.78
SEC22C-215ENST00000487701 SCAPERQ9BY12 1400 aa10.18□□□□□ -0.78
SEC22C-215ENST00000487701 MDM2Q00987 491 aaPredicted RBP10.18□□□□□ -0.78
SEC22C-215ENST00000487701 EFCAB2Q5VUJ9 269 aa10.18□□□□□ -0.78
SEC22C-215ENST00000487701 SULF1Q8IWU6 871 aa10.18□□□□□ -0.78
SEC22C-215ENST00000487701 SYCP2Q9BX26 1530 aa10.17□□□□□ -0.78
SEC22C-215ENST00000487701 ZMYND10O75800 440 aa10.17□□□□□ -0.78
SEC22C-215ENST00000487701 BARGINQ6ZT62 677 aa10.17□□□□□ -0.78
SEC22C-215ENST00000487701 ZFYVE16Q7Z3T8 1539 aa10.17□□□□□ -0.78
SEC22C-215ENST00000487701 CCNB3Q8WWL7 1395 aa10.16□□□□□ -0.78
SEC22C-215ENST00000487701 ACTN4O43707 911 aaKnown RBP10.16□□□□□ -0.78
SEC22C-215ENST00000487701 KANK4Q5T7N3 995 aaPredicted RBP10.16□□□□□ -0.78
SEC22C-215ENST00000487701 HECW2Q9P2P5 1572 aa10.16□□□□□ -0.78
SEC22C-215ENST00000487701 KIDINS220Q9ULH0 1771 aa10.16□□□□□ -0.78
SEC22C-215ENST00000487701 ABCA6Q8N139 1617 aa10.15□□□□□ -0.78
SEC22C-215ENST00000487701 ZNF516Q92618 1163 aa10.15□□□□□ -0.78
SEC22C-215ENST00000487701 ZNF518AQ6AHZ1 1483 aa10.15□□□□□ -0.78
SEC22C-215ENST00000487701 YEATS2Q9ULM3 1422 aa10.15□□□□□ -0.79
SEC22C-215ENST00000487701 TRAPPC8Q9Y2L5 1435 aa10.15□□□□□ -0.79
SEC22C-215ENST00000487701 BLOC1S3Q6QNY0 202 aa10.14□□□□□ -0.79
SEC22C-215ENST00000487701 DIP2CQ9Y2E4 1556 aa10.14□□□□□ -0.79
SEC22C-215ENST00000487701 BCORL1Q5H9F3 1711 aa10.13□□□□□ -0.79
SEC22C-215ENST00000487701 MAGI2Q86UL8 1455 aa10.13□□□□□ -0.79
SEC22C-215ENST00000487701 INO80Q9ULG1 1556 aaPredicted RBP10.13□□□□□ -0.79
SEC22C-215ENST00000487701 ADAMTSL3P82987 1691 aa10.12□□□□□ -0.79
SEC22C-215ENST00000487701 CAMSAP2Q08AD1 1489 aa10.12□□□□□ -0.79
SEC22C-215ENST00000487701 CLCN1P35523 988 aa10.12□□□□□ -0.79
SEC22C-215ENST00000487701 GPCPD1Q9NPB8 672 aa10.12□□□□□ -0.79
SEC22C-215ENST00000487701 CFDP1Q9UEE9 299 aaPredicted RBP10.12□□□□□ -0.79
SEC22C-215ENST00000487701 PLEKHH2Q8IVE3 1493 aa10.11□□□□□ -0.79
SEC22C-215ENST00000487701 KIAA1107Q9UPP5 1409 aa10.11□□□□□ -0.79
SEC22C-215ENST00000487701 TTLL12Q14166 644 aaPredicted RBP10.11□□□□□ -0.79
SEC22C-215ENST00000487701 AFAP1Q8N556 730 aa10.11□□□□□ -0.79
SEC22C-215ENST00000487701 ZNF777Q9ULD5 760 aaPredicted RBP10.11□□□□□ -0.79
SEC22C-215ENST00000487701 MBD5Q9P267 1494 aa10.1□□□□□ -0.79
SEC22C-215ENST00000487701 MLH3Q9UHC1 1453 aa10.1□□□□□ -0.79
SEC22C-215ENST00000487701 ZNF644Q9H582 1327 aaPredicted RBP10.1□□□□□ -0.79
SEC22C-215ENST00000487701 ADGBQ8N7X0 1667 aa10.1□□□□□ -0.79
SEC22C-215ENST00000487701 ZPR1O75312 459 aa10.1□□□□□ -0.79
SEC22C-215ENST00000487701 PUS10Q3MIT2 529 aaKnown RBP10.1□□□□□ -0.79
SEC22C-215ENST00000487701 REREQ9P2R6 1566 aa10.09□□□□□ -0.79
SEC22C-215ENST00000487701 MYOM3Q5VTT5 1437 aa10.09□□□□□ -0.79
SEC22C-215ENST00000487701 FER1L4A9Z1Z3 1794 aa10.09□□□□□ -0.79
SEC22C-215ENST00000487701 ATP7AQ04656 1500 aa10.09□□□□□ -0.79
SEC22C-215ENST00000487701 NKX2-3Q8TAU0 364 aa10.09□□□□□ -0.79
SEC22C-215ENST00000487701 ARHGEF5Q12774 1597 aa10.09□□□□□ -0.79
SEC22C-215ENST00000487701 CROCC2H7BZ55 1655 aa10.09□□□□□ -0.79
SEC22C-215ENST00000487701 MADDQ8WXG6 1647 aa10.08□□□□□ -0.8
SEC22C-215ENST00000487701 PTPN23Q9H3S7 1636 aa10.08□□□□□ -0.8
SEC22C-215ENST00000487701 TLL1O43897 1013 aa10.08□□□□□ -0.8
SEC22C-215ENST00000487701 NR1I2O75469 434 aa10.08□□□□□ -0.8
SEC22C-215ENST00000487701 GCGRP47871 477 aa10.08□□□□□ -0.8
SEC22C-215ENST00000487701 HNRNPMP52272 730 aaKnown RBP eCLIP10.08□□□□□ -0.8
SEC22C-215ENST00000487701 FUT2Q10981 343 aa10.08□□□□□ -0.8
SEC22C-215ENST00000487701 ATP10AO60312 1499 aa10.08□□□□□ -0.8
SEC22C-215ENST00000487701 C9orf84Q5VXU9 1444 aa10.07□□□□□ -0.8
SEC22C-215ENST00000487701 RIMS1Q86UR5 1692 aaKnown RBP10.07□□□□□ -0.8
SEC22C-215ENST00000487701 CD46P15529 392 aa10.07□□□□□ -0.8
SEC22C-215ENST00000487701 CCDC141Q6ZP82 1450 aa10.06□□□□□ -0.8
SEC22C-215ENST00000487701 PPP1R18Q6NYC8 613 aa10.06□□□□□ -0.8
SEC22C-215ENST00000487701 MIA2Q96PC5 1412 aa10.06□□□□□ -0.8
SEC22C-215ENST00000487701 PLXNC1O60486 1568 aa10.05□□□□□ -0.8
SEC22C-215ENST00000487701 AK7Q96M32 723 aa10.05□□□□□ -0.8
SEC22C-215ENST00000487701 MAST1Q9Y2H9 1570 aa10.05□□□□□ -0.8
SEC22C-215ENST00000487701 GGCXP38435 758 aa10.04□□□□□ -0.8
SEC22C-215ENST00000487701 ATP6V1AP38606 617 aa10.04□□□□□ -0.8
SEC22C-215ENST00000487701 AMHR2Q16671 573 aa10.04□□□□□ -0.8
SEC22C-215ENST00000487701 FAM217BQ9NTX9 383 aaPredicted RBP10.04□□□□□ -0.8
SEC22C-215ENST00000487701 FGD6Q6ZV73 1430 aa10.04□□□□□ -0.8
SEC22C-215ENST00000487701 SPAG9O60271 1321 aaKnown RBP10.04□□□□□ -0.8
SEC22C-215ENST00000487701 TCOF1Q13428 1488 aaKnown RBP10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms