RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 VARSP26640 1264 aaKnown RBP9.89□□□□□ -0.83
UBR3-211ENST00000487689 GSK3AP49840 483 aa9.89□□□□□ -0.83
UBR3-211ENST00000487689 PTPRNQ16849 979 aa9.89□□□□□ -0.83
UBR3-211ENST00000487689 FAM217BQ9NTX9 383 aaPredicted RBP9.89□□□□□ -0.83
UBR3-211ENST00000487689 EVA1BQ9NVM1 165 aa9.89□□□□□ -0.83
UBR3-211ENST00000487689 MPNDQ8N594 471 aa9.88□□□□□ -0.83
UBR3-211ENST00000487689 ZNF511Q8NB15 262 aa9.88□□□□□ -0.83
UBR3-211ENST00000487689 GPCPD1Q9NPB8 672 aa9.88□□□□□ -0.83
UBR3-211ENST00000487689 KCNH2Q12809 1159 aa9.87□□□□□ -0.83
UBR3-211ENST00000487689 KLF16Q9BXK1 252 aaPredicted RBP9.86□□□□□ -0.83
UBR3-211ENST00000487689 MAN1A2O60476 641 aa9.85□□□□□ -0.83
UBR3-211ENST00000487689 PPFIA3O75145 1194 aa9.84□□□□□ -0.83
UBR3-211ENST00000487689 C6orf118Q5T5N4 469 aa9.84□□□□□ -0.83
UBR3-211ENST00000487689 TTLL12Q14166 644 aaPredicted RBP9.83□□□□□ -0.84
UBR3-211ENST00000487689 TMEM151AQ8N4L1 468 aa9.83□□□□□ -0.84
UBR3-211ENST00000487689 PRR7Q8TB68 274 aa9.82□□□□□ -0.84
UBR3-211ENST00000487689 ZFAND3Q9H8U3 227 aa9.82□□□□□ -0.84
UBR3-211ENST00000487689 ZIC2O95409 532 aaPredicted RBP9.81□□□□□ -0.84
UBR3-211ENST00000487689 RASSF7Q02833 373 aa9.81□□□□□ -0.84
UBR3-211ENST00000487689 FAM174AQ8TBP5 190 aa9.81□□□□□ -0.84
UBR3-211ENST00000487689 GDF11O95390 407 aa9.8□□□□□ -0.84
UBR3-211ENST00000487689 NDUFV2P19404 249 aa9.8□□□□□ -0.84
UBR3-211ENST00000487689 ITPKCQ96DU7 683 aa9.8□□□□□ -0.84
UBR3-211ENST00000487689 ARID5BQ14865 1188 aa9.79□□□□□ -0.84
UBR3-211ENST00000487689 BARGINQ6ZT62 677 aa9.79□□□□□ -0.84
UBR3-211ENST00000487689 ZC3H15Q8WU90 426 aaKnown RBP9.78□□□□□ -0.84
UBR3-211ENST00000487689 SPIRE2Q8WWL2 714 aa9.78□□□□□ -0.84
UBR3-211ENST00000487689 CDK15Q96Q40 435 aa9.78□□□□□ -0.84
UBR3-211ENST00000487689 ZMYND10O75800 440 aa9.77□□□□□ -0.85
UBR3-211ENST00000487689 BMP2P12643 396 aa9.77□□□□□ -0.85
UBR3-211ENST00000487689 CTHP32929 405 aa9.77□□□□□ -0.85
UBR3-211ENST00000487689 FOXJ1Q92949 421 aa9.77□□□□□ -0.85
UBR3-211ENST00000487689 MOXD2PA6NHM9 499 aa9.76□□□□□ -0.85
UBR3-211ENST00000487689 NR3C2P08235 984 aa9.76□□□□□ -0.85
UBR3-211ENST00000487689 KRT76Q01546 638 aa9.76□□□□□ -0.85
UBR3-211ENST00000487689 DESI1Q6ICB0 168 aa9.76□□□□□ -0.85
UBR3-211ENST00000487689 ADAMTS8Q9UP79 889 aa9.76□□□□□ -0.85
UBR3-211ENST00000487689 UPP2O95045 317 aa9.75□□□□□ -0.85
UBR3-211ENST00000487689 SSTR3P32745 418 aaPredicted RBP9.75□□□□□ -0.85
UBR3-211ENST00000487689 MTMR2Q13614 643 aa9.75□□□□□ -0.85
UBR3-211ENST00000487689 GPR161Q8N6U8 529 aaKnown RBP9.75□□□□□ -0.85
UBR3-211ENST00000487689 CNTNAP3BQ96NU0 1288 aa9.75□□□□□ -0.85
UBR3-211ENST00000487689 CNTNAP3Q9BZ76 1288 aa9.75□□□□□ -0.85
UBR3-211ENST00000487689 RNF225M0QZC1 329 aaPredicted RBP9.74□□□□□ -0.85
UBR3-211ENST00000487689 NR5A1Q13285 461 aa9.74□□□□□ -0.85
UBR3-211ENST00000487689 LINC00528Q8N1L1 170 aa9.74□□□□□ -0.85
UBR3-211ENST00000487689 DNMT3LQ9UJW3 386 aa9.74□□□□□ -0.85
UBR3-211ENST00000487689 SPDYE5A6NIY4 337 aa9.73□□□□□ -0.85
UBR3-211ENST00000487689 SOS2Q07890 1332 aaPredicted RBP9.73□□□□□ -0.85
UBR3-211ENST00000487689 MEIOBQ8N635 442 aa9.72□□□□□ -0.85
UBR3-211ENST00000487689 GRM5P41594 1212 aa9.71□□□□□ -0.86
UBR3-211ENST00000487689 DIXDC1Q155Q3 683 aa9.71□□□□□ -0.86
UBR3-211ENST00000487689 AMHR2Q16671 573 aa9.71□□□□□ -0.86
UBR3-211ENST00000487689 LYPD8Q6UX82 237 aa9.71□□□□□ -0.86
UBR3-211ENST00000487689 AK7Q96M32 723 aa9.7□□□□□ -0.86
UBR3-211ENST00000487689 MAP10Q9P2G4 905 aa9.7□□□□□ -0.86
UBR3-211ENST00000487689 SPTLC1O15269 473 aa9.69□□□□□ -0.86
UBR3-211ENST00000487689 AGERQ15109 404 aa9.69□□□□□ -0.86
UBR3-211ENST00000487689 C4orf48Q5BLP8 95 aa9.69□□□□□ -0.86
UBR3-211ENST00000487689 GIGYF2Q6Y7W6 1299 aaKnown RBP9.69□□□□□ -0.86
UBR3-211ENST00000487689 ZNF385CQ66K41 422 aaPredicted RBP9.68□□□□□ -0.86
UBR3-211ENST00000487689 COL25A1Q9BXS0 654 aaPredicted RBP9.68□□□□□ -0.86
UBR3-211ENST00000487689 F12P00748 615 aaPredicted RBP9.66□□□□□ -0.86
UBR3-211ENST00000487689 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.66□□□□□ -0.868e-7■■■□□ 14.6
UBR3-211ENST00000487689 GPAT2Q6NUI2 795 aa9.66□□□□□ -0.86
UBR3-211ENST00000487689 SVOPQ8N4V2 548 aa9.66□□□□□ -0.86
UBR3-211ENST00000487689 BEGAINQ9BUH8 593 aa9.66□□□□□ -0.86
UBR3-211ENST00000487689 CFAP99D6REC4 459 aa9.65□□□□□ -0.86
UBR3-211ENST00000487689 PTSQ03393 145 aa9.65□□□□□ -0.86
UBR3-211ENST00000487689 BPHLQ86WA6 291 aaPredicted RBP9.65□□□□□ -0.86
UBR3-211ENST00000487689 TSEN34Q9BSV6 310 aaKnown RBP9.65□□□□□ -0.86
UBR3-211ENST00000487689 TTLL8A6PVC2 850 aa9.64□□□□□ -0.87
UBR3-211ENST00000487689 IRS1P35568 1242 aa9.64□□□□□ -0.87
UBR3-211ENST00000487689 RNFT1Q5M7Z0 435 aa9.64□□□□□ -0.87
UBR3-211ENST00000487689 TRIM66O15016 1216 aa9.63□□□□□ -0.87
UBR3-211ENST00000487689 FSHRP23945 695 aa9.63□□□□□ -0.87
UBR3-211ENST00000487689 WHAMMQ8TF30 809 aa9.63□□□□□ -0.87
UBR3-211ENST00000487689 DNMT3AQ9Y6K1 912 aaPredicted RBP9.63□□□□□ -0.87
UBR3-211ENST00000487689 FIGNL2A6NMB9 653 aa9.62□□□□□ -0.87
UBR3-211ENST00000487689 NANOS1Q8WY41 292 aaKnown RBP9.62□□□□□ -0.87
UBR3-211ENST00000487689 PCDHB15Q9Y5E8 787 aa9.62□□□□□ -0.87
UBR3-211ENST00000487689 IGHA1P01876 353 aa9.61□□□□□ -0.87
UBR3-211ENST00000487689 RSBN1LQ6PCB5 846 aaPredicted RBP9.61□□□□□ -0.87
UBR3-211ENST00000487689 PARP9Q8IXQ6 854 aa9.61□□□□□ -0.87
UBR3-211ENST00000487689 GJA5P36382 358 aa9.6□□□□□ -0.87
UBR3-211ENST00000487689 CCDC155Q8N6L0 562 aa9.6□□□□□ -0.87
UBR3-211ENST00000487689 TBC1D2Q9BYX2 928 aa9.6□□□□□ -0.87
UBR3-211ENST00000487689 EMILIN1Q9Y6C2 1016 aa9.6□□□□□ -0.87
UBR3-211ENST00000487689 ARHGEF15O94989 841 aa9.59□□□□□ -0.87
UBR3-211ENST00000487689 HRCP23327 699 aa9.59□□□□□ -0.87
UBR3-211ENST00000487689 VASH1Q7L8A9 365 aaPredicted RBP9.59□□□□□ -0.87
UBR3-211ENST00000487689 C1QTNF2Q9BXJ5 285 aa9.59□□□□□ -0.87
UBR3-211ENST00000487689 PER1O15534 1290 aaPredicted RBP9.58□□□□□ -0.88
UBR3-211ENST00000487689 SLURP2P0DP57 97 aa9.58□□□□□ -0.88
UBR3-211ENST00000487689 MARSP56192 900 aaKnown RBP9.58□□□□□ -0.88
UBR3-211ENST00000487689 ZBTB3Q9H5J0 574 aa9.58□□□□□ -0.88
UBR3-211ENST00000487689 MAP4K5Q9Y4K4 846 aa9.58□□□□□ -0.88
UBR3-211ENST00000487689 KANK3Q6NY19 840 aa9.57□□□□□ -0.88
UBR3-211ENST00000487689 CCDC116Q8IYX3 515 aa9.57□□□□□ -0.88
UBR3-211ENST00000487689 VWA5B2Q8N398 1253 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms