RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 A0A1W2PP64 1363 aa18.4■□□□□ 0.54
COL4A6-207ENST00000487645 SSH2Q76I76 1423 aa18.4■□□□□ 0.54
COL4A6-207ENST00000487645 PAK3O75914 559 aaPredicted RBP18.39■□□□□ 0.53
COL4A6-207ENST00000487645 ALS2Q96Q42 1657 aa18.38■□□□□ 0.53
COL4A6-207ENST00000487645 TTC21AQ8NDW8 1320 aa18.38■□□□□ 0.53
COL4A6-207ENST00000487645 JCADQ9P266 1359 aa18.38■□□□□ 0.53
COL4A6-207ENST00000487645 EDC4Q6P2E9 1401 aaKnown RBP18.38■□□□□ 0.53
COL4A6-207ENST00000487645 PANK3Q9H999 370 aa18.37■□□□□ 0.53
COL4A6-207ENST00000487645 TTC21BQ7Z4L5 1316 aa18.37■□□□□ 0.53
COL4A6-207ENST00000487645 ARHGEF10O15013 1369 aa18.37■□□□□ 0.53
COL4A6-207ENST00000487645 TNS3Q68CZ2 1445 aa18.37■□□□□ 0.53
COL4A6-207ENST00000487645 SHPRHQ149N8 1683 aa18.37■□□□□ 0.53
COL4A6-207ENST00000487645 ZNF316A6NFI3 1004 aaPredicted RBP18.36■□□□□ 0.53
COL4A6-207ENST00000487645 NRKQ7Z2Y5 1582 aa18.36■□□□□ 0.53
COL4A6-207ENST00000487645 ABTB2Q8N961 1025 aa18.35■□□□□ 0.53
COL4A6-207ENST00000487645 CARD14Q9BXL6 1004 aa18.35■□□□□ 0.53
COL4A6-207ENST00000487645 PNPLA6Q8IY17 1366 aa18.34■□□□□ 0.53
COL4A6-207ENST00000487645 LMOD2Q6P5Q4 547 aa18.34■□□□□ 0.53
COL4A6-207ENST00000487645 COL22A1Q8NFW1 1626 aaPredicted RBP18.34■□□□□ 0.53
COL4A6-207ENST00000487645 NLRP13Q86W25 1043 aa18.32■□□□□ 0.52
COL4A6-207ENST00000487645 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.32■□□□□ 0.52
COL4A6-207ENST00000487645 SPATA31A6Q5VVP1 1343 aa18.31■□□□□ 0.52
COL4A6-207ENST00000487645 PIK3C2AO00443 1686 aa18.31■□□□□ 0.52
COL4A6-207ENST00000487645 NLRP6P59044 892 aa18.3■□□□□ 0.52
COL4A6-207ENST00000487645 NSD3Q9BZ95 1437 aa18.3■□□□□ 0.52
COL4A6-207ENST00000487645 USP31Q70CQ4 1352 aa18.3■□□□□ 0.52
COL4A6-207ENST00000487645 KIF20BQ96Q89 1820 aa18.29■□□□□ 0.52
COL4A6-207ENST00000487645 PER1O15534 1290 aaPredicted RBP18.29■□□□□ 0.52
COL4A6-207ENST00000487645 USP54Q70EL1 1684 aa18.28■□□□□ 0.52
COL4A6-207ENST00000487645 FYB1O15117 783 aa18.28■□□□□ 0.52
COL4A6-207ENST00000487645 NME9Q86XW9 330 aa18.28■□□□□ 0.52
COL4A6-207ENST00000487645 KNSTRNQ9Y448 316 aa18.28■□□□□ 0.52
COL4A6-207ENST00000487645 CGNL1Q0VF96 1302 aa18.27■□□□□ 0.52
COL4A6-207ENST00000487645 MED1Q15648 1581 aaPredicted RBP18.27■□□□□ 0.52
COL4A6-207ENST00000487645 NUTM2GQ5VZR2 741 aa18.27■□□□□ 0.52
COL4A6-207ENST00000487645 MARF1Q9Y4F3 1742 aaKnown RBP18.26■□□□□ 0.51
COL4A6-207ENST00000487645 CRYBG1Q9Y4K1 1723 aa18.26■□□□□ 0.51
COL4A6-207ENST00000487645 USP19O94966 1318 aa18.25■□□□□ 0.51
COL4A6-207ENST00000487645 ABCA3Q99758 1704 aa18.25■□□□□ 0.51
COL4A6-207ENST00000487645 DDX10Q13206 875 aaKnown RBP18.24■□□□□ 0.51
COL4A6-207ENST00000487645 KCNH5Q8NCM2 988 aa18.24■□□□□ 0.51
COL4A6-207ENST00000487645 CABLES1Q8TDN4 633 aa18.24■□□□□ 0.51
COL4A6-207ENST00000487645 COG3Q96JB2 828 aa18.24■□□□□ 0.51
COL4A6-207ENST00000487645 ZRANB1Q9UGI0 708 aa18.24■□□□□ 0.51
COL4A6-207ENST00000487645 NUTM2BA6NNL0 878 aaPredicted RBP18.23■□□□□ 0.51
COL4A6-207ENST00000487645 NUTM2EB1AL46 878 aaPredicted RBP18.23■□□□□ 0.51
COL4A6-207ENST00000487645 GCP02774 474 aa18.23■□□□□ 0.51
COL4A6-207ENST00000487645 HAP1P54257 671 aaPredicted RBP18.23■□□□□ 0.51
COL4A6-207ENST00000487645 NUTM2AQ8IVF1 878 aaPredicted RBP18.23■□□□□ 0.51
COL4A6-207ENST00000487645 GGNBP2Q9H3C7 697 aa18.23■□□□□ 0.51
COL4A6-207ENST00000487645 ANKRD26Q9UPS8 1709 aa18.23■□□□□ 0.51
COL4A6-207ENST00000487645 PHRF1Q9P1Y6 1649 aaKnown RBP18.23■□□□□ 0.51
COL4A6-207ENST00000487645 NSD2O96028 1365 aa18.22■□□□□ 0.51
COL4A6-207ENST00000487645 AMER1Q5JTC6 1135 aaPredicted RBP18.22■□□□□ 0.51
COL4A6-207ENST00000487645 SLIT3O75094 1523 aa18.22■□□□□ 0.51
COL4A6-207ENST00000487645 OVOS2A0A0J9YW53 1432 aa18.22■□□□□ 0.51
COL4A6-207ENST00000487645 OVOS2Q6IE36 1432 aa18.22■□□□□ 0.51
COL4A6-207ENST00000487645 NPC1L1Q9UHC9 1359 aa18.21■□□□□ 0.51
COL4A6-207ENST00000487645 PLEKHG5O94827 1062 aa18.2■□□□□ 0.5
COL4A6-207ENST00000487645 LRP6O75581 1613 aa18.18■□□□□ 0.5
COL4A6-207ENST00000487645 CPDO75976 1380 aa18.17■□□□□ 0.5
COL4A6-207ENST00000487645 MAP2P11137 1827 aaKnown RBP18.17■□□□□ 0.5
COL4A6-207ENST00000487645 ADAMTS2O95450 1211 aa18.17■□□□□ 0.5
COL4A6-207ENST00000487645 ZC3H6P61129 1189 aaKnown RBP18.16■□□□□ 0.5
COL4A6-207ENST00000487645 MEX3CQ5U5Q3 659 aaKnown RBP18.16■□□□□ 0.5
COL4A6-207ENST00000487645 NFAT5O94916 1531 aa18.15■□□□□ 0.5
COL4A6-207ENST00000487645 FAM83GA6ND36 823 aa18.15■□□□□ 0.5
COL4A6-207ENST00000487645 MORC1Q86VD1 984 aa18.15■□□□□ 0.5
COL4A6-207ENST00000487645 ARHGEF25Q86VW2 580 aa18.15■□□□□ 0.5
COL4A6-207ENST00000487645 LTN1O94822 1766 aa18.14■□□□□ 0.5
COL4A6-207ENST00000487645 KIAA0232Q92628 1395 aa18.14■□□□□ 0.49
COL4A6-207ENST00000487645 COL14A1Q05707 1796 aaKnown RBP18.14■□□□□ 0.49
COL4A6-207ENST00000487645 SOX12O15370 315 aa18.13■□□□□ 0.49
COL4A6-207ENST00000487645 CC2D1BQ5T0F9 858 aaKnown RBP18.13■□□□□ 0.49
COL4A6-207ENST00000487645 NGLY1Q96IV0 654 aa18.13■□□□□ 0.49
COL4A6-207ENST00000487645 PRDM11Q9NQV5 511 aa18.13■□□□□ 0.49
COL4A6-207ENST00000487645 FNBP4Q8N3X1 1017 aaPredicted RBP18.12■□□□□ 0.49
COL4A6-207ENST00000487645 C8orf37Q96NL8 207 aa18.12■□□□□ 0.49
COL4A6-207ENST00000487645 AATKQ6ZMQ8 1374 aa18.12■□□□□ 0.49
COL4A6-207ENST00000487645 COL18A1P39060 1754 aa18.12■□□□□ 0.49
COL4A6-207ENST00000487645 NWD2Q9ULI1 1742 aa18.11■□□□□ 0.49
COL4A6-207ENST00000487645 RGPD5Q99666 1765 aa18.1■□□□□ 0.49
COL4A6-207ENST00000487645 FBLN1P23142 703 aa18.09■□□□□ 0.49
COL4A6-207ENST00000487645 CHRNA2Q15822 529 aa18.09■□□□□ 0.49
COL4A6-207ENST00000487645 PLCH1Q4KWH8 1693 aa18.09■□□□□ 0.49
COL4A6-207ENST00000487645 ABCC6O95255 1503 aa18.08■□□□□ 0.49
COL4A6-207ENST00000487645 KIF24Q5T7B8 1368 aa18.08■□□□□ 0.49
COL4A6-207ENST00000487645 MAP3K19Q56UN5 1328 aa18.08■□□□□ 0.49
COL4A6-207ENST00000487645 TNNT2P45379 298 aaPredicted RBP18.08■□□□□ 0.48
COL4A6-207ENST00000487645 IP6K1Q92551 441 aa18.08■□□□□ 0.48
COL4A6-207ENST00000487645 LMO7Q8WWI1 1683 aa18.08■□□□□ 0.48
COL4A6-207ENST00000487645 SLIT2O94813 1529 aa18.08■□□□□ 0.48
COL4A6-207ENST00000487645 AMPHP49418 695 aa18.07■□□□□ 0.48
COL4A6-207ENST00000487645 RRS1Q15050 365 aaKnown RBP18.07■□□□□ 0.48
COL4A6-207ENST00000487645 BTG4Q9NY30 223 aa18.07■□□□□ 0.48
COL4A6-207ENST00000487645 POLKQ9UBT6 870 aa18.07■□□□□ 0.48
COL4A6-207ENST00000487645 AFF2P51816 1311 aa18.06■□□□□ 0.48
COL4A6-207ENST00000487645 ZBTB7CA1YPR0 619 aa18.06■□□□□ 0.48
COL4A6-207ENST00000487645 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.06■□□□□ 0.48
COL4A6-207ENST00000487645 CAMTA1Q9Y6Y1 1673 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms