RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-215ENST00000487620 NCBP3Q53F19 620 aaKnown RBP12.34□□□□□ -0.43
ZNF3-215ENST00000487620 HSCBQ8IWL3 235 aa12.34□□□□□ -0.43
ZNF3-215ENST00000487620 TMEM57Q8N5G2 664 aa12.34□□□□□ -0.43
ZNF3-215ENST00000487620 PLEKHF1Q96S99 279 aa12.34□□□□□ -0.43
ZNF3-215ENST00000487620 RRAGDQ9NQL2 400 aaPredicted RBP12.34□□□□□ -0.43
ZNF3-215ENST00000487620 STK26Q9P289 416 aa12.34□□□□□ -0.43
ZNF3-215ENST00000487620 RPGRIP1LQ68CZ1 1315 aa12.34□□□□□ -0.43
ZNF3-215ENST00000487620 XRCC6P12956 609 aaKnown RBP eCLIP12.34□□□□□ -0.43
ZNF3-215ENST00000487620 ASXL2Q76L83 1435 aa12.33□□□□□ -0.44
ZNF3-215ENST00000487620 A0A1W2PP64 1363 aa12.33□□□□□ -0.44
ZNF3-215ENST00000487620 RIPK4P57078 832 aa12.33□□□□□ -0.44
ZNF3-215ENST00000487620 VGFO15240 615 aaPredicted RBP12.32□□□□□ -0.44
ZNF3-215ENST00000487620 TRAK2O60296 914 aa12.32□□□□□ -0.44
ZNF3-215ENST00000487620 PANK2Q9BZ23 570 aa12.32□□□□□ -0.44
ZNF3-215ENST00000487620 SMC5Q8IY18 1101 aa12.32□□□□□ -0.44
ZNF3-215ENST00000487620 LNPKQ9C0E8 428 aa12.32□□□□□ -0.44
ZNF3-215ENST00000487620 PUS7Q96PZ0 661 aaKnown RBP12.31□□□□□ -0.44
ZNF3-215ENST00000487620 CAMSAP1Q5T5Y3 1602 aa12.31□□□□□ -0.44
ZNF3-215ENST00000487620 ABCC11Q96J66 1382 aa12.31□□□□□ -0.44
ZNF3-215ENST00000487620 ZBTB40Q9NUA8 1239 aa12.31□□□□□ -0.44
ZNF3-215ENST00000487620 FSD2A1L4K1 749 aa12.3□□□□□ -0.44
ZNF3-215ENST00000487620 IPO8O15397 1037 aaKnown RBP12.3□□□□□ -0.44
ZNF3-215ENST00000487620 KIF16BQ96L93 1317 aa12.3□□□□□ -0.44
ZNF3-215ENST00000487620 FRMPD1Q5SYB0 1578 aa12.29□□□□□ -0.44
ZNF3-215ENST00000487620 SIGLEC1Q9BZZ2 1709 aa12.29□□□□□ -0.44
ZNF3-215ENST00000487620 HECW2Q9P2P5 1572 aa12.29□□□□□ -0.44
ZNF3-215ENST00000487620 MINK1Q8N4C8 1332 aaPredicted RBP12.29□□□□□ -0.44
ZNF3-215ENST00000487620 COL3A1P02461 1466 aaPredicted RBP12.29□□□□□ -0.44
ZNF3-215ENST00000487620 FYB1O15117 783 aa12.28□□□□□ -0.44
ZNF3-215ENST00000487620 DIAPH1O60610 1272 aaKnown RBP12.28□□□□□ -0.44
ZNF3-215ENST00000487620 NUCB1Q02818 461 aa12.28□□□□□ -0.44
ZNF3-215ENST00000487620 IL16Q14005 1332 aa12.28□□□□□ -0.44
ZNF3-215ENST00000487620 ABCC3O15438 1527 aa12.28□□□□□ -0.44
ZNF3-215ENST00000487620 NEXMIFQ5QGS0 1516 aa12.28□□□□□ -0.44
ZNF3-215ENST00000487620 DDX11L8A8MPP1 907 aa12.27□□□□□ -0.44
ZNF3-215ENST00000487620 CHD1LQ86WJ1 897 aa12.27□□□□□ -0.44
ZNF3-215ENST00000487620 TERF2IPQ9NYB0 399 aa12.27□□□□□ -0.44
ZNF3-215ENST00000487620 HSP90AB1P08238 724 aaKnown RBP12.27□□□□□ -0.45
ZNF3-215ENST00000487620 ZNF692Q9BU19 519 aaPredicted RBP12.27□□□□□ -0.45
ZNF3-215ENST00000487620 RBM25P49756 843 aaKnown RBP12.26□□□□□ -0.45
ZNF3-215ENST00000487620 POGZQ7Z3K3 1410 aa12.26□□□□□ -0.45
ZNF3-215ENST00000487620 ANKRD45Q5TZF3 282 aa12.26□□□□□ -0.45
ZNF3-215ENST00000487620 ANKRD26Q9UPS8 1709 aa12.26□□□□□ -0.45
ZNF3-215ENST00000487620 PNNQ9H307 717 aaKnown RBP12.25□□□□□ -0.45
ZNF3-215ENST00000487620 C1orf115Q9H7X2 142 aa12.25□□□□□ -0.45
ZNF3-215ENST00000487620 HSP90AA1P07900 732 aaKnown RBP12.25□□□□□ -0.45
ZNF3-215ENST00000487620 MRE11P49959 708 aa12.25□□□□□ -0.45
ZNF3-215ENST00000487620 PRAM1Q96QH2 718 aa12.25□□□□□ -0.45
ZNF3-215ENST00000487620 FOXD4L1Q9NU39 408 aa12.25□□□□□ -0.45
ZNF3-215ENST00000487620 IDI1Q13907 227 aa12.24□□□□□ -0.45
ZNF3-215ENST00000487620 ALDH1L2Q3SY69 923 aa12.24□□□□□ -0.45
ZNF3-215ENST00000487620 TNPO1Q92973 898 aaKnown RBP12.24□□□□□ -0.45
ZNF3-215ENST00000487620 PIK3C2BO00750 1634 aa12.24□□□□□ -0.45
ZNF3-215ENST00000487620 FBLN1P23142 703 aa12.24□□□□□ -0.45
ZNF3-215ENST00000487620 PRKAR2BP31323 418 aa12.24□□□□□ -0.45
ZNF3-215ENST00000487620 GRPEL1Q9HAV7 217 aa12.24□□□□□ -0.45
ZNF3-215ENST00000487620 NCOA3Q9Y6Q9 1424 aa12.24□□□□□ -0.45
ZNF3-215ENST00000487620 ATAD2Q6PL18 1390 aa12.24□□□□□ -0.45
ZNF3-215ENST00000487620 MYO5BQ9ULV0 1848 aa12.24□□□□□ -0.45
ZNF3-215ENST00000487620 MLH3Q9UHC1 1453 aa12.24□□□□□ -0.45
ZNF3-215ENST00000487620 NPM1P06748 294 aaKnown RBP eCLIP12.24□□□□□ -0.45
ZNF3-215ENST00000487620 HDGFL2Q7Z4V5 671 aaPredicted RBP12.24□□□□□ -0.45
ZNF3-215ENST00000487620 SNX21Q969T3 373 aa12.24□□□□□ -0.45
ZNF3-215ENST00000487620 ELL2O00472 640 aaPredicted RBP12.23□□□□□ -0.45
ZNF3-215ENST00000487620 BMP2KLQ5H9B9 411 aa12.23□□□□□ -0.45
ZNF3-215ENST00000487620 THUMPD2Q9BTF0 503 aaKnown RBP12.23□□□□□ -0.45
ZNF3-215ENST00000487620 LRRC7Q96NW7 1537 aa12.23□□□□□ -0.45
ZNF3-215ENST00000487620 DDIT3P35638 169 aa12.23□□□□□ -0.45
ZNF3-215ENST00000487620 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.23□□□□□ -0.45
ZNF3-215ENST00000487620 CFAP74Q9C0B2 1584 aa12.22□□□□□ -0.45
ZNF3-215ENST00000487620 FCHSD2O94868 740 aa12.22□□□□□ -0.45
ZNF3-215ENST00000487620 RAPGEF3O95398 923 aa12.22□□□□□ -0.45
ZNF3-215ENST00000487620 HMOX1P09601 288 aa12.22□□□□□ -0.45
ZNF3-215ENST00000487620 NAP1L5Q96NT1 182 aaPredicted RBP12.22□□□□□ -0.45
ZNF3-215ENST00000487620 CD163L1Q9NR16 1453 aa12.22□□□□□ -0.45
ZNF3-215ENST00000487620 PPIP5K1Q6PFW1 1433 aa12.22□□□□□ -0.45
ZNF3-215ENST00000487620 GBP4Q96PP9 640 aa12.22□□□□□ -0.45
ZNF3-215ENST00000487620 CABP1Q9NZU7 370 aa12.22□□□□□ -0.45
ZNF3-215ENST00000487620 ZBTB7BO15156 539 aaPredicted RBP12.21□□□□□ -0.45
ZNF3-215ENST00000487620 CD2BP2O95400 341 aaKnown RBP12.21□□□□□ -0.45
ZNF3-215ENST00000487620 PTPRMP28827 1452 aa12.21□□□□□ -0.46
ZNF3-215ENST00000487620 KIF20BQ96Q89 1820 aa12.21□□□□□ -0.46
ZNF3-215ENST00000487620 GCC1Q96CN9 775 aa12.21□□□□□ -0.46
ZNF3-215ENST00000487620 RBM42Q9BTD8 480 aaKnown RBP12.21□□□□□ -0.46
ZNF3-215ENST00000487620 MED14O60244 1454 aa12.2□□□□□ -0.46
ZNF3-215ENST00000487620 CLCN1P35523 988 aa12.2□□□□□ -0.46
ZNF3-215ENST00000487620 TBC1D9Q6ZT07 1266 aa12.2□□□□□ -0.46
ZNF3-215ENST00000487620 TSPYL6Q8N831 410 aa12.2□□□□□ -0.46
ZNF3-215ENST00000487620 KIF2CQ99661 725 aa12.2□□□□□ -0.46
ZNF3-215ENST00000487620 CDK19Q9BWU1 502 aa12.2□□□□□ -0.46
ZNF3-215ENST00000487620 PNPLA6Q8IY17 1366 aa12.2□□□□□ -0.46
ZNF3-215ENST00000487620 RAB3GAP1Q15042 981 aa12.2□□□□□ -0.46
ZNF3-215ENST00000487620 UBE2Q2Q8WVN8 375 aa12.2□□□□□ -0.46
ZNF3-215ENST00000487620 PHACTR3Q96KR7 559 aa12.2□□□□□ -0.46
ZNF3-215ENST00000487620 CIZ1Q9ULV3 898 aaPredicted RBP12.2□□□□□ -0.46
ZNF3-215ENST00000487620 AK9Q5TCS8 1911 aa12.2□□□□□ -0.46
ZNF3-215ENST00000487620 VAMP4O75379 141 aa12.19□□□□□ -0.46
ZNF3-215ENST00000487620 MRPL50Q8N5N7 158 aaKnown RBP12.19□□□□□ -0.46
ZNF3-215ENST00000487620 MAP2P11137 1827 aaKnown RBP12.19□□□□□ -0.46
ZNF3-215ENST00000487620 ZFYVE9O95405 1425 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms