RNA–Protein interactions for RNA: ENST00000487615.5

TRA2B-214, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,485 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-214ENST00000487615 ERCC6L2Q5T890 1561 aa14.62□□□□□ -0.07
TRA2B-214ENST00000487615 SSH1Q8WYL5 1049 aa14.62□□□□□ -0.07
TRA2B-214ENST00000487615 FGD1P98174 961 aa14.62□□□□□ -0.07
TRA2B-214ENST00000487615 FOXD4L1Q9NU39 408 aa14.62□□□□□ -0.07
TRA2B-214ENST00000487615 CROCC2H7BZ55 1655 aa14.62□□□□□ -0.07
TRA2B-214ENST00000487615 PLA2R1Q13018 1463 aa14.61□□□□□ -0.07
TRA2B-214ENST00000487615 TPRNQ4KMQ1 711 aa14.61□□□□□ -0.07
TRA2B-214ENST00000487615 GPATCH3Q96I76 525 aa14.61□□□□□ -0.07
TRA2B-214ENST00000487615 FYB1O15117 783 aa14.61□□□□□ -0.07
TRA2B-214ENST00000487615 GSE1Q14687 1217 aa14.61□□□□□ -0.07
TRA2B-214ENST00000487615 EMILIN1Q9Y6C2 1016 aa14.61□□□□□ -0.07
TRA2B-214ENST00000487615 INSRP06213 1382 aa14.61□□□□□ -0.07
TRA2B-214ENST00000487615 GCC1Q96CN9 775 aa14.6□□□□□ -0.07
TRA2B-214ENST00000487615 RNF123Q5XPI4 1314 aa14.6□□□□□ -0.07
TRA2B-214ENST00000487615 CFAP65Q6ZU64 1925 aaKnown RBP14.6□□□□□ -0.07
TRA2B-214ENST00000487615 THUMPD2Q9BTF0 503 aaKnown RBP14.6□□□□□ -0.07
TRA2B-214ENST00000487615 PLXNC1O60486 1568 aa14.6□□□□□ -0.07
TRA2B-214ENST00000487615 NFKBIBQ15653 356 aa14.59□□□□□ -0.07
TRA2B-214ENST00000487615 TMEM57Q8N5G2 664 aa14.59□□□□□ -0.07
TRA2B-214ENST00000487615 C1orf115Q9H7X2 142 aa14.59□□□□□ -0.07
TRA2B-214ENST00000487615 REC8O95072 547 aa14.59□□□□□ -0.07
TRA2B-214ENST00000487615 TRPM2O94759 1503 aa14.59□□□□□ -0.07
TRA2B-214ENST00000487615 RILPL2Q969X0 211 aa14.59□□□□□ -0.07
TRA2B-214ENST00000487615 CCDC27Q2M243 656 aa14.58□□□□□ -0.08
TRA2B-214ENST00000487615 ALDH1L2Q3SY69 923 aa14.58□□□□□ -0.08
TRA2B-214ENST00000487615 CHMP5Q9NZZ3 219 aa14.58□□□□□ -0.08
TRA2B-214ENST00000487615 NPATQ14207 1427 aa14.58□□□□□ -0.08
TRA2B-214ENST00000487615 DDX11L8A8MPP1 907 aa14.58□□□□□ -0.08
TRA2B-214ENST00000487615 BLMP54132 1417 aaPredicted RBP14.57□□□□□ -0.08
TRA2B-214ENST00000487615 PTMAP06454 111 aaKnown RBP14.57□□□□□ -0.08
TRA2B-214ENST00000487615 GOLGA6L3A6NEY3 463 aa14.57□□□□□ -0.08
TRA2B-214ENST00000487615 CCDC30Q5VVM6 783 aa14.56□□□□□ -0.08
TRA2B-214ENST00000487615 IFT57Q9NWB7 429 aa14.56□□□□□ -0.08
TRA2B-214ENST00000487615 NEO1Q92859 1461 aa14.56□□□□□ -0.08
TRA2B-214ENST00000487615 IQGAP3Q86VI3 1631 aa14.56□□□□□ -0.08
TRA2B-214ENST00000487615 ZMYM4Q5VZL5 1548 aa14.56□□□□□ -0.08
TRA2B-214ENST00000487615 CDC45O75419 566 aa14.56□□□□□ -0.08
TRA2B-214ENST00000487615 INTS3Q68E01 1043 aaKnown RBP14.56□□□□□ -0.08
TRA2B-214ENST00000487615 IL16Q14005 1332 aa14.56□□□□□ -0.08
TRA2B-214ENST00000487615 SLC4A2P04920 1241 aa14.56□□□□□ -0.08
TRA2B-214ENST00000487615 ESCO1Q5FWF5 840 aa14.56□□□□□ -0.08
TRA2B-214ENST00000487615 RIMS2Q9UQ26 1411 aa14.56□□□□□ -0.08
TRA2B-214ENST00000487615 PTPRTO14522 1441 aa14.55□□□□□ -0.08
TRA2B-214ENST00000487615 C9orf78Q9NZ63 289 aaPredicted RBP14.55□□□□□ -0.08
TRA2B-214ENST00000487615 TNRQ92752 1358 aa14.55□□□□□ -0.08
TRA2B-214ENST00000487615 SBNO2Q9Y2G9 1366 aa14.55□□□□□ -0.08
TRA2B-214ENST00000487615 TRIM27P14373 513 aa14.55□□□□□ -0.08
TRA2B-214ENST00000487615 A0A1W2PP64 1363 aa14.55□□□□□ -0.08
TRA2B-214ENST00000487615 CDC42BPBQ9Y5S2 1711 aa14.55□□□□□ -0.08
TRA2B-214ENST00000487615 GNAI3P08754 354 aa14.55□□□□□ -0.08
TRA2B-214ENST00000487615 ZNF330Q9Y3S2 320 aaPredicted RBP14.55□□□□□ -0.08
TRA2B-214ENST00000487615 PRDM15P57071 1507 aaPredicted RBP14.54□□□□□ -0.08
TRA2B-214ENST00000487615 ANKLE2Q86XL3 938 aa14.54□□□□□ -0.08
TRA2B-214ENST00000487615 MAGI2Q86UL8 1455 aa14.54□□□□□ -0.08
TRA2B-214ENST00000487615 ZFYVE16Q7Z3T8 1539 aa14.54□□□□□ -0.08
TRA2B-214ENST00000487615 CEBPAP49715 358 aaPredicted RBP14.54□□□□□ -0.08
TRA2B-214ENST00000487615 AMOTL2Q9Y2J4 779 aa14.54□□□□□ -0.08
TRA2B-214ENST00000487615 YTHDC2Q9H6S0 1430 aaKnown RBP14.54□□□□□ -0.08
TRA2B-214ENST00000487615 CHD1LQ86WJ1 897 aa14.53□□□□□ -0.08
TRA2B-214ENST00000487615 UNC13BO14795 1591 aa14.53□□□□□ -0.08
TRA2B-214ENST00000487615 NOL8Q76FK4 1167 aaKnown RBP14.53□□□□□ -0.08
TRA2B-214ENST00000487615 UBTFL1P0CB47 393 aaPredicted RBP14.53□□□□□ -0.08
TRA2B-214ENST00000487615 NEXNQ0ZGT2 675 aa14.53□□□□□ -0.08
TRA2B-214ENST00000487615 DCTN1Q14203 1278 aa14.53□□□□□ -0.08
TRA2B-214ENST00000487615 CHMP3Q9Y3E7 222 aa14.53□□□□□ -0.08
TRA2B-214ENST00000487615 BCORL1Q5H9F3 1711 aa14.52□□□□□ -0.08
TRA2B-214ENST00000487615 RAPGEF4Q8WZA2 1011 aa14.52□□□□□ -0.08
TRA2B-214ENST00000487615 SPINK5Q9NQ38 1064 aaPredicted RBP14.52□□□□□ -0.08
TRA2B-214ENST00000487615 KDM5AP29375 1690 aaKnown RBP14.52□□□□□ -0.08
TRA2B-214ENST00000487615 CFAP74Q9C0B2 1584 aa14.52□□□□□ -0.08
TRA2B-214ENST00000487615 IGHDP01880 384 aa14.52□□□□□ -0.09
TRA2B-214ENST00000487615 FBLN1P23142 703 aa14.52□□□□□ -0.09
TRA2B-214ENST00000487615 NAP1L2Q9ULW6 460 aaPredicted RBP14.52□□□□□ -0.09
TRA2B-214ENST00000487615 ARAP3Q8WWN8 1544 aa14.52□□□□□ -0.09
TRA2B-214ENST00000487615 DDX58O95786 925 aaKnown RBP14.52□□□□□ -0.09
TRA2B-214ENST00000487615 GOLGA6L4A6NEF3 574 aa14.51□□□□□ -0.09
TRA2B-214ENST00000487615 TTC5Q8N0Z6 440 aa14.51□□□□□ -0.09
TRA2B-214ENST00000487615 MYOM2P54296 1465 aa14.51□□□□□ -0.09
TRA2B-214ENST00000487615 ATF3P18847 181 aa14.51□□□□□ -0.09
TRA2B-214ENST00000487615 CCT4P50991 539 aaKnown RBP14.51□□□□□ -0.09
TRA2B-214ENST00000487615 UGGT1Q9NYU2 1555 aa14.5□□□□□ -0.09
TRA2B-214ENST00000487615 MCM10Q7L590 875 aa14.5□□□□□ -0.09
TRA2B-214ENST00000487615 PLEKHO1Q53GL0 409 aaPredicted RBP14.5□□□□□ -0.09
TRA2B-214ENST00000487615 HDGFL1Q5TGJ6 251 aa14.5□□□□□ -0.09
TRA2B-214ENST00000487615 PPIP5K1Q6PFW1 1433 aa14.5□□□□□ -0.09
TRA2B-214ENST00000487615 MLH3Q9UHC1 1453 aa14.49□□□□□ -0.09
TRA2B-214ENST00000487615 GNAI2P04899 355 aa14.49□□□□□ -0.09
TRA2B-214ENST00000487615 HSP90AB4PQ58FF6 505 aa14.49□□□□□ -0.09
TRA2B-214ENST00000487615 POLKQ9UBT6 870 aa14.49□□□□□ -0.09
TRA2B-214ENST00000487615 SHROOM2Q13796 1616 aa14.49□□□□□ -0.09
TRA2B-214ENST00000487615 ACEP12821 1306 aa14.49□□□□□ -0.09
TRA2B-214ENST00000487615 ZRSR1Q15695 479 aaKnown RBP14.49□□□□□ -0.09
TRA2B-214ENST00000487615 PROSER2Q86WR7 435 aaPredicted RBP14.49□□□□□ -0.09
TRA2B-214ENST00000487615 ANO2Q9NQ90 1003 aa14.49□□□□□ -0.09
TRA2B-214ENST00000487615 NLRP2Q9NX02 1062 aa14.49□□□□□ -0.09
TRA2B-214ENST00000487615 TET3O43151 1660 aa14.49□□□□□ -0.09
TRA2B-214ENST00000487615 PLCB2Q00722 1185 aa14.49□□□□□ -0.09
TRA2B-214ENST00000487615 SYNMO15061 1565 aa14.48□□□□□ -0.09
TRA2B-214ENST00000487615 SKOR2Q2VWA4 1001 aaPredicted RBP14.48□□□□□ -0.09
TRA2B-214ENST00000487615 DIAPH3Q9NSV4 1193 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms