RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 KTN1Q86UP2 1357 aaKnown RBP26.85■■□□□ 1.89
PCOLCE-208ENST00000487172 MON2Q7Z3U7 1717 aa26.85■■□□□ 1.89
PCOLCE-208ENST00000487172 JCADQ9P266 1359 aa26.84■■□□□ 1.89
PCOLCE-208ENST00000487172 TNS3Q68CZ2 1445 aa26.84■■□□□ 1.89
PCOLCE-208ENST00000487172 SHPRHQ149N8 1683 aa26.81■■□□□ 1.88
PCOLCE-208ENST00000487172 ALS2Q96Q42 1657 aa26.81■■□□□ 1.88
PCOLCE-208ENST00000487172 TTC21BQ7Z4L5 1316 aa26.8■■□□□ 1.88
PCOLCE-208ENST00000487172 ARHGEF10O15013 1369 aa26.8■■□□□ 1.88
PCOLCE-208ENST00000487172 PNPLA6Q8IY17 1366 aa26.8■■□□□ 1.88
PCOLCE-208ENST00000487172 NRKQ7Z2Y5 1582 aa26.8■■□□□ 1.88
PCOLCE-208ENST00000487172 PAK3O75914 559 aaPredicted RBP26.79■■□□□ 1.88
PCOLCE-208ENST00000487172 TTC21AQ8NDW8 1320 aa26.79■■□□□ 1.88
PCOLCE-208ENST00000487172 EDC4Q6P2E9 1401 aaKnown RBP26.79■■□□□ 1.88
PCOLCE-208ENST00000487172 COL22A1Q8NFW1 1626 aaPredicted RBP26.76■■□□□ 1.87
PCOLCE-208ENST00000487172 ABTB2Q8N961 1025 aa26.75■■□□□ 1.87
PCOLCE-208ENST00000487172 SPATA31A6Q5VVP1 1343 aa26.74■■□□□ 1.87
PCOLCE-208ENST00000487172 LMOD2Q6P5Q4 547 aa26.74■■□□□ 1.87
PCOLCE-208ENST00000487172 CARD14Q9BXL6 1004 aa26.74■■□□□ 1.87
PCOLCE-208ENST00000487172 PANK3Q9H999 370 aa26.74■■□□□ 1.87
PCOLCE-208ENST00000487172 NLRP13Q86W25 1043 aa26.7■■□□□ 1.86
PCOLCE-208ENST00000487172 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.7■■□□□ 1.86
PCOLCE-208ENST00000487172 PIK3C2AO00443 1686 aa26.7■■□□□ 1.86
PCOLCE-208ENST00000487172 MED1Q15648 1581 aaPredicted RBP26.69■■□□□ 1.86
PCOLCE-208ENST00000487172 USP31Q70CQ4 1352 aa26.69■■□□□ 1.86
PCOLCE-208ENST00000487172 NSD3Q9BZ95 1437 aa26.68■■□□□ 1.86
PCOLCE-208ENST00000487172 ZNF316A6NFI3 1004 aaPredicted RBP26.67■■□□□ 1.86
PCOLCE-208ENST00000487172 NLRP6P59044 892 aa26.67■■□□□ 1.86
PCOLCE-208ENST00000487172 USP54Q70EL1 1684 aa26.66■■□□□ 1.86
PCOLCE-208ENST00000487172 NUTM2GQ5VZR2 741 aa26.65■■□□□ 1.86
PCOLCE-208ENST00000487172 NME9Q86XW9 330 aa26.65■■□□□ 1.86
PCOLCE-208ENST00000487172 CRYBG1Q9Y4K1 1723 aa26.65■■□□□ 1.86
PCOLCE-208ENST00000487172 USP19O94966 1318 aa26.65■■□□□ 1.86
PCOLCE-208ENST00000487172 FYB1O15117 783 aa26.64■■□□□ 1.86
PCOLCE-208ENST00000487172 PER1O15534 1290 aaPredicted RBP26.64■■□□□ 1.86
PCOLCE-208ENST00000487172 CABLES1Q8TDN4 633 aa26.63■■□□□ 1.85
PCOLCE-208ENST00000487172 CGNL1Q0VF96 1302 aa26.63■■□□□ 1.85
PCOLCE-208ENST00000487172 KNSTRNQ9Y448 316 aa26.62■■□□□ 1.85
PCOLCE-208ENST00000487172 ABCA3Q99758 1704 aa26.62■■□□□ 1.85
PCOLCE-208ENST00000487172 MARF1Q9Y4F3 1742 aaKnown RBP26.62■■□□□ 1.85
PCOLCE-208ENST00000487172 KIF20BQ96Q89 1820 aa26.6■■□□□ 1.85
PCOLCE-208ENST00000487172 SLIT3O75094 1523 aa26.6■■□□□ 1.85
PCOLCE-208ENST00000487172 OVOS2A0A0J9YW53 1432 aa26.6■■□□□ 1.85
PCOLCE-208ENST00000487172 OVOS2Q6IE36 1432 aa26.6■■□□□ 1.85
PCOLCE-208ENST00000487172 NUTM2BA6NNL0 878 aaPredicted RBP26.6■■□□□ 1.85
PCOLCE-208ENST00000487172 NUTM2EB1AL46 878 aaPredicted RBP26.6■■□□□ 1.85
PCOLCE-208ENST00000487172 NUTM2AQ8IVF1 878 aaPredicted RBP26.6■■□□□ 1.85
PCOLCE-208ENST00000487172 ZRANB1Q9UGI0 708 aa26.6■■□□□ 1.85
PCOLCE-208ENST00000487172 LRP6O75581 1613 aa26.6■■□□□ 1.85
PCOLCE-208ENST00000487172 PHRF1Q9P1Y6 1649 aaKnown RBP26.6■■□□□ 1.85
PCOLCE-208ENST00000487172 GCP02774 474 aa26.58■■□□□ 1.85
PCOLCE-208ENST00000487172 HAP1P54257 671 aaPredicted RBP26.58■■□□□ 1.85
PCOLCE-208ENST00000487172 KCNH5Q8NCM2 988 aa26.58■■□□□ 1.85
PCOLCE-208ENST00000487172 COG3Q96JB2 828 aa26.58■■□□□ 1.85
PCOLCE-208ENST00000487172 GGNBP2Q9H3C7 697 aa26.57■■□□□ 1.84
PCOLCE-208ENST00000487172 NSD2O96028 1365 aa26.56■■□□□ 1.84
PCOLCE-208ENST00000487172 PLEKHG5O94827 1062 aa26.55■■□□□ 1.84
PCOLCE-208ENST00000487172 AMER1Q5JTC6 1135 aaPredicted RBP26.54■■□□□ 1.84
PCOLCE-208ENST00000487172 ADAMTS2O95450 1211 aa26.53■■□□□ 1.84
PCOLCE-208ENST00000487172 DDX10Q13206 875 aaKnown RBP26.53■■□□□ 1.84
PCOLCE-208ENST00000487172 NPC1L1Q9UHC9 1359 aa26.53■■□□□ 1.84
PCOLCE-208ENST00000487172 ANKRD26Q9UPS8 1709 aa26.51■■□□□ 1.83
PCOLCE-208ENST00000487172 CPDO75976 1380 aa26.51■■□□□ 1.83
PCOLCE-208ENST00000487172 NFAT5O94916 1531 aa26.49■■□□□ 1.83
PCOLCE-208ENST00000487172 MEX3CQ5U5Q3 659 aaKnown RBP26.49■■□□□ 1.83
PCOLCE-208ENST00000487172 ZC3H6P61129 1189 aaKnown RBP26.48■■□□□ 1.83
PCOLCE-208ENST00000487172 KIAA0232Q92628 1395 aa26.47■■□□□ 1.83
PCOLCE-208ENST00000487172 ARHGEF25Q86VW2 580 aa26.47■■□□□ 1.83
PCOLCE-208ENST00000487172 FAM83GA6ND36 823 aa26.46■■□□□ 1.83
PCOLCE-208ENST00000487172 FNBP4Q8N3X1 1017 aaPredicted RBP26.45■■□□□ 1.82
PCOLCE-208ENST00000487172 C8orf37Q96NL8 207 aa26.45■■□□□ 1.82
PCOLCE-208ENST00000487172 PRDM11Q9NQV5 511 aa26.45■■□□□ 1.82
PCOLCE-208ENST00000487172 COL14A1Q05707 1796 aaKnown RBP26.44■■□□□ 1.82
PCOLCE-208ENST00000487172 SOX12O15370 315 aa26.44■■□□□ 1.82
PCOLCE-208ENST00000487172 NGLY1Q96IV0 654 aa26.44■■□□□ 1.82
PCOLCE-208ENST00000487172 MORC1Q86VD1 984 aa26.43■■□□□ 1.82
PCOLCE-208ENST00000487172 AATKQ6ZMQ8 1374 aa26.43■■□□□ 1.82
PCOLCE-208ENST00000487172 SLIT2O94813 1529 aa26.42■■□□□ 1.82
PCOLCE-208ENST00000487172 CC2D1BQ5T0F9 858 aaKnown RBP26.41■■□□□ 1.82
PCOLCE-208ENST00000487172 ABCC6O95255 1503 aa26.39■■□□□ 1.82
PCOLCE-208ENST00000487172 NWD2Q9ULI1 1742 aa26.39■■□□□ 1.82
PCOLCE-208ENST00000487172 LTN1O94822 1766 aa26.39■■□□□ 1.82
PCOLCE-208ENST00000487172 COL18A1P39060 1754 aa26.39■■□□□ 1.82
PCOLCE-208ENST00000487172 FBLN1P23142 703 aa26.39■■□□□ 1.82
PCOLCE-208ENST00000487172 CHRNA2Q15822 529 aa26.39■■□□□ 1.82
PCOLCE-208ENST00000487172 LMO7Q8WWI1 1683 aa26.38■■□□□ 1.81
PCOLCE-208ENST00000487172 AFF2P51816 1311 aa26.38■■□□□ 1.81
PCOLCE-208ENST00000487172 PLCH1Q4KWH8 1693 aa26.38■■□□□ 1.81
PCOLCE-208ENST00000487172 MAP3K19Q56UN5 1328 aa26.37■■□□□ 1.81
PCOLCE-208ENST00000487172 KIF24Q5T7B8 1368 aa26.36■■□□□ 1.81
PCOLCE-208ENST00000487172 BTG4Q9NY30 223 aa26.36■■□□□ 1.81
PCOLCE-208ENST00000487172 BCL9LQ86UU0 1499 aa26.36■■□□□ 1.81
PCOLCE-208ENST00000487172 MAP2P11137 1827 aaKnown RBP26.35■■□□□ 1.81
PCOLCE-208ENST00000487172 RRS1Q15050 365 aaKnown RBP26.35■■□□□ 1.81
PCOLCE-208ENST00000487172 USP21Q9UK80 565 aa26.35■■□□□ 1.81
PCOLCE-208ENST00000487172 CAMTA1Q9Y6Y1 1673 aa26.34■■□□□ 1.81
PCOLCE-208ENST00000487172 ZBTB7CA1YPR0 619 aa26.34■■□□□ 1.81
PCOLCE-208ENST00000487172 ZNF772Q68DY9 489 aaPredicted RBP26.34■■□□□ 1.81
PCOLCE-208ENST00000487172 UNC5CLQ8IV45 518 aa26.34■■□□□ 1.81
PCOLCE-208ENST00000487172 IP6K1Q92551 441 aa26.34■■□□□ 1.81
PCOLCE-208ENST00000487172 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms