RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 RBM42Q9BTD8 480 aaKnown RBP20.78■□□□□ 0.92
CLDN11-207ENST00000486975 BCL9LQ86UU0 1499 aa20.77■□□□□ 0.92
CLDN11-207ENST00000486975 TRPM3Q9HCF6 1732 aaPredicted RBP20.77■□□□□ 0.92
CLDN11-207ENST00000486975 RGS12O14924 1447 aa20.77■□□□□ 0.91
CLDN11-207ENST00000486975 ITSN1Q15811 1721 aa20.76■□□□□ 0.91
CLDN11-207ENST00000486975 SLIT2O94813 1529 aa20.75■□□□□ 0.91
CLDN11-207ENST00000486975 NUDT16Q96DE0 195 aaKnown RBP20.75■□□□□ 0.91
CLDN11-207ENST00000486975 CDK19Q9BWU1 502 aa20.74■□□□□ 0.91
CLDN11-207ENST00000486975 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.74■□□□□ 0.91
CLDN11-207ENST00000486975 CENPJQ9HC77 1338 aaPredicted RBP20.74■□□□□ 0.91
CLDN11-207ENST00000486975 ALS2Q96Q42 1657 aa20.73■□□□□ 0.91
CLDN11-207ENST00000486975 ABCA3Q99758 1704 aa20.73■□□□□ 0.91
CLDN11-207ENST00000486975 ATXN8OSP0DMR3 200 aa20.73■□□□□ 0.91
CLDN11-207ENST00000486975 TRPM1Q7Z4N2 1603 aa20.72■□□□□ 0.91
CLDN11-207ENST00000486975 NGDNQ8NEJ9 315 aaKnown RBP20.72■□□□□ 0.91
CLDN11-207ENST00000486975 TOPAZ1Q8N9V7 1692 aa20.72■□□□□ 0.91
CLDN11-207ENST00000486975 TRIM26Q12899 539 aaPredicted RBP20.71■□□□□ 0.91
CLDN11-207ENST00000486975 NEUROD1Q13562 356 aa20.71■□□□□ 0.91
CLDN11-207ENST00000486975 CCDC61Q9Y6R9 512 aa20.71■□□□□ 0.91
CLDN11-207ENST00000486975 POLR3AO14802 1390 aaPredicted RBP20.71■□□□□ 0.91
CLDN11-207ENST00000486975 HAP1P54257 671 aaPredicted RBP20.7■□□□□ 0.9
CLDN11-207ENST00000486975 LMOD2Q6P5Q4 547 aa20.7■□□□□ 0.9
CLDN11-207ENST00000486975 CABLES1Q8TDN4 633 aa20.7■□□□□ 0.9
CLDN11-207ENST00000486975 UPF1Q92900 1129 aaKnown RBP eCLIP20.7■□□□□ 0.9
CLDN11-207ENST00000486975 UNC5CLQ8IV45 518 aa20.69■□□□□ 0.9
CLDN11-207ENST00000486975 PLEKHG3A1L390 1219 aa20.68■□□□□ 0.9
CLDN11-207ENST00000486975 POTEHQ6S545 545 aa20.68■□□□□ 0.9
CLDN11-207ENST00000486975 GJD4Q96KN9 370 aaPredicted RBP20.67■□□□□ 0.9
CLDN11-207ENST00000486975 ZBTB12Q9Y330 459 aaPredicted RBP20.67■□□□□ 0.9
CLDN11-207ENST00000486975 QRICH2Q9H0J4 1663 aa20.67■□□□□ 0.9
CLDN11-207ENST00000486975 NWD2Q9ULI1 1742 aa20.67■□□□□ 0.9
CLDN11-207ENST00000486975 ROCK2O75116 1388 aaKnown RBP20.66■□□□□ 0.9
CLDN11-207ENST00000486975 CRYBG1Q9Y4K1 1723 aa20.64■□□□□ 0.9
CLDN11-207ENST00000486975 PLCH1Q4KWH8 1693 aa20.64■□□□□ 0.9
CLDN11-207ENST00000486975 ACEP12821 1306 aa20.64■□□□□ 0.89
CLDN11-207ENST00000486975 RALGAPBQ86X10 1494 aa20.63■□□□□ 0.89
CLDN11-207ENST00000486975 SRPK2P78362 688 aaKnown RBP20.63■□□□□ 0.89
CLDN11-207ENST00000486975 VPS72Q15906 364 aa20.63■□□□□ 0.89
CLDN11-207ENST00000486975 NBPF8Q3BBV2 869 aa20.63■□□□□ 0.89
CLDN11-207ENST00000486975 GLI3P10071 1580 aa20.63■□□□□ 0.89
CLDN11-207ENST00000486975 ATAD2Q6PL18 1390 aa20.62■□□□□ 0.89
CLDN11-207ENST00000486975 PAK3O75914 559 aaPredicted RBP20.62■□□□□ 0.89
CLDN11-207ENST00000486975 PPIP5K1Q6PFW1 1433 aa20.61■□□□□ 0.89
CLDN11-207ENST00000486975 BRD4O60885 1362 aaPredicted RBP20.61■□□□□ 0.89
CLDN11-207ENST00000486975 FAM83GA6ND36 823 aa20.61■□□□□ 0.89
CLDN11-207ENST00000486975 TONSLQ96HA7 1378 aa20.6■□□□□ 0.89
CLDN11-207ENST00000486975 COL14A1Q05707 1796 aaKnown RBP20.6■□□□□ 0.89
CLDN11-207ENST00000486975 EVC2Q86UK5 1308 aa20.59■□□□□ 0.89
CLDN11-207ENST00000486975 PLEKHG5O94827 1062 aa20.59■□□□□ 0.89
CLDN11-207ENST00000486975 CABP2Q9NPB3 220 aa20.59■□□□□ 0.89
CLDN11-207ENST00000486975 SBNO2Q9Y2G9 1366 aa20.59■□□□□ 0.89
CLDN11-207ENST00000486975 NRAPQ86VF7 1730 aa20.57■□□□□ 0.88
CLDN11-207ENST00000486975 PHRF1Q9P1Y6 1649 aaKnown RBP20.56■□□□□ 0.88
CLDN11-207ENST00000486975 ONECUT3O60422 494 aaPredicted RBP20.55■□□□□ 0.88
CLDN11-207ENST00000486975 USP19O94966 1318 aa20.54■□□□□ 0.88
CLDN11-207ENST00000486975 USP6P35125 1406 aa20.54■□□□□ 0.88
CLDN11-207ENST00000486975 PRDM11Q9NQV5 511 aa20.54■□□□□ 0.88
CLDN11-207ENST00000486975 BTG4Q9NY30 223 aa20.54■□□□□ 0.88
CLDN11-207ENST00000486975 CABP1Q9NZU7 370 aa20.53■□□□□ 0.88
CLDN11-207ENST00000486975 KIAA0232Q92628 1395 aa20.52■□□□□ 0.88
CLDN11-207ENST00000486975 ABTB2Q8N961 1025 aa20.52■□□□□ 0.88
CLDN11-207ENST00000486975 CARD11Q9BXL7 1154 aa20.52■□□□□ 0.88
CLDN11-207ENST00000486975 SSH2Q76I76 1423 aa20.52■□□□□ 0.87
CLDN11-207ENST00000486975 NRKQ7Z2Y5 1582 aa20.51■□□□□ 0.87
CLDN11-207ENST00000486975 CPDO75976 1380 aa20.5■□□□□ 0.87
CLDN11-207ENST00000486975 NLRP13Q86W25 1043 aa20.5■□□□□ 0.87
CLDN11-207ENST00000486975 SEPT12Q8IYM1 358 aa20.5■□□□□ 0.87
CLDN11-207ENST00000486975 CCDC9Q9Y3X0 531 aaKnown RBP20.5■□□□□ 0.87
CLDN11-207ENST00000486975 NUTM2GQ5VZR2 741 aa20.49■□□□□ 0.87
CLDN11-207ENST00000486975 CCDC125Q86Z20 511 aa20.49■□□□□ 0.87
CLDN11-207ENST00000486975 SPATA31A5Q5VU36 1347 aa20.48■□□□□ 0.87
CLDN11-207ENST00000486975 SPATA31A7Q8IWB4 1347 aa20.48■□□□□ 0.87
CLDN11-207ENST00000486975 ZNF692Q9BU19 519 aaPredicted RBP20.47■□□□□ 0.87
CLDN11-207ENST00000486975 CPSF1Q10570 1443 aaKnown RBP20.46■□□□□ 0.87
CLDN11-207ENST00000486975 ZC3H6P61129 1189 aaKnown RBP20.46■□□□□ 0.87
CLDN11-207ENST00000486975 SLIT3O75094 1523 aa20.45■□□□□ 0.86
CLDN11-207ENST00000486975 GCP02774 474 aa20.45■□□□□ 0.86
CLDN11-207ENST00000486975 CHRNA2Q15822 529 aa20.45■□□□□ 0.86
CLDN11-207ENST00000486975 BRWD3Q6RI45 1802 aa20.44■□□□□ 0.86
CLDN11-207ENST00000486975 LMO7Q8WWI1 1683 aa20.44■□□□□ 0.86
CLDN11-207ENST00000486975 PIK3C2AO00443 1686 aa20.43■□□□□ 0.86
CLDN11-207ENST00000486975 FAM98CQ17RN3 349 aaKnown RBP20.43■□□□□ 0.86
CLDN11-207ENST00000486975 PUS7Q96PZ0 661 aaKnown RBP20.43■□□□□ 0.86
CLDN11-207ENST00000486975 AKAP12Q02952 1782 aa20.43■□□□□ 0.86
CLDN11-207ENST00000486975 BLMP54132 1417 aaPredicted RBP20.43■□□□□ 0.86
CLDN11-207ENST00000486975 NLRP6P59044 892 aa20.42■□□□□ 0.86
CLDN11-207ENST00000486975 KRT27Q7Z3Y8 459 aa20.42■□□□□ 0.86
CLDN11-207ENST00000486975 SPATA31A1Q5TZJ5 1347 aa20.42■□□□□ 0.86
CLDN11-207ENST00000486975 TTC21AQ8NDW8 1320 aa20.42■□□□□ 0.86
CLDN11-207ENST00000486975 THSD7AQ9UPZ6 1657 aa20.42■□□□□ 0.86
CLDN11-207ENST00000486975 CAMTA1Q9Y6Y1 1673 aa20.42■□□□□ 0.86
CLDN11-207ENST00000486975 TTC21BQ7Z4L5 1316 aa20.41■□□□□ 0.86
CLDN11-207ENST00000486975 CLSPNQ9HAW4 1339 aa20.41■□□□□ 0.86
CLDN11-207ENST00000486975 EP400Q96L91 3159 aa20.4■□□□□ 0.86
CLDN11-207ENST00000486975 KTN1Q86UP2 1357 aaKnown RBP20.39■□□□□ 0.85
CLDN11-207ENST00000486975 SLC24A1O60721 1099 aa20.39■□□□□ 0.85
CLDN11-207ENST00000486975 AATKQ6ZMQ8 1374 aa20.38■□□□□ 0.85
CLDN11-207ENST00000486975 STRN4Q9NRL3 753 aa20.38■□□□□ 0.85
CLDN11-207ENST00000486975 TIMELESSQ9UNS1 1208 aa20.38■□□□□ 0.85
CLDN11-207ENST00000486975 MON2Q7Z3U7 1717 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 196.7 ms