RNA–Protein interactions for RNA: ENST00000486954.1

LINC00996-202, long intergenic non-protein coding RNA 996, humanhuman

TSL 4

Gene LINC00996, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-202ENST00000486954 SLC12A5Q9H2X9 1139 aa16.19■□□□□ 0.18
LINC00996-202ENST00000486954 COL22A1Q8NFW1 1626 aaPredicted RBP16.19■□□□□ 0.18
LINC00996-202ENST00000486954 CPSF1Q10570 1443 aaKnown RBP16.19■□□□□ 0.18
LINC00996-202ENST00000486954 ALS2Q96Q42 1657 aa16.18■□□□□ 0.18
LINC00996-202ENST00000486954 A0A1W2PP64 1363 aa16.18■□□□□ 0.18
LINC00996-202ENST00000486954 ANKRD36BQ8N2N9 1353 aa16.18■□□□□ 0.18
LINC00996-202ENST00000486954 NRKQ7Z2Y5 1582 aa16.17■□□□□ 0.18
LINC00996-202ENST00000486954 HAP1P54257 671 aaPredicted RBP16.17■□□□□ 0.18
LINC00996-202ENST00000486954 CD163L1Q9NR16 1453 aa16.16■□□□□ 0.18
LINC00996-202ENST00000486954 EDC4Q6P2E9 1401 aaKnown RBP16.16■□□□□ 0.18
LINC00996-202ENST00000486954 TTC21AQ8NDW8 1320 aa16.16■□□□□ 0.18
LINC00996-202ENST00000486954 MED1Q15648 1581 aaPredicted RBP16.15■□□□□ 0.18
LINC00996-202ENST00000486954 KIF7Q2M1P5 1343 aa16.15■□□□□ 0.18
LINC00996-202ENST00000486954 NUTM2BA6NNL0 878 aaPredicted RBP16.14■□□□□ 0.17
LINC00996-202ENST00000486954 NUTM2EB1AL46 878 aaPredicted RBP16.14■□□□□ 0.17
LINC00996-202ENST00000486954 MEX3CQ5U5Q3 659 aaKnown RBP16.14■□□□□ 0.17
LINC00996-202ENST00000486954 NUTM2AQ8IVF1 878 aaPredicted RBP16.14■□□□□ 0.17
LINC00996-202ENST00000486954 ABTB2Q8N961 1025 aa16.14■□□□□ 0.17
LINC00996-202ENST00000486954 TTC21BQ7Z4L5 1316 aa16.13■□□□□ 0.17
LINC00996-202ENST00000486954 SSH2Q76I76 1423 aa16.12■□□□□ 0.17
LINC00996-202ENST00000486954 ABCA3Q99758 1704 aa16.12■□□□□ 0.17
LINC00996-202ENST00000486954 PLEKHG5O94827 1062 aa16.12■□□□□ 0.17
LINC00996-202ENST00000486954 CCDC7Q96M83 1385 aa16.12■□□□□ 0.17
LINC00996-202ENST00000486954 PIK3C2AO00443 1686 aa16.11■□□□□ 0.17
LINC00996-202ENST00000486954 NLRP13Q86W25 1043 aa16.11■□□□□ 0.17
LINC00996-202ENST00000486954 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.11■□□□□ 0.17
LINC00996-202ENST00000486954 LRP6O75581 1613 aa16.11■□□□□ 0.17
LINC00996-202ENST00000486954 PHRF1Q9P1Y6 1649 aaKnown RBP16.1■□□□□ 0.17
LINC00996-202ENST00000486954 C11orf95C9JLR9 678 aaPredicted RBP16.1■□□□□ 0.17
LINC00996-202ENST00000486954 NUTM2GQ5VZR2 741 aa16.1■□□□□ 0.17
LINC00996-202ENST00000486954 NSD3Q9BZ95 1437 aa16.1■□□□□ 0.17
LINC00996-202ENST00000486954 NLRP6P59044 892 aa16.09■□□□□ 0.17
LINC00996-202ENST00000486954 PHF23Q9BUL5 403 aaPredicted RBP16.09■□□□□ 0.17
LINC00996-202ENST00000486954 CRYBG1Q9Y4K1 1723 aa16.08■□□□□ 0.17
LINC00996-202ENST00000486954 WASHC2AQ641Q2 1341 aa16.08■□□□□ 0.16
LINC00996-202ENST00000486954 MARF1Q9Y4F3 1742 aaKnown RBP16.08■□□□□ 0.16
LINC00996-202ENST00000486954 KIF20BQ96Q89 1820 aa16.08■□□□□ 0.16
LINC00996-202ENST00000486954 ADAMTS2O95450 1211 aa16.07■□□□□ 0.16
LINC00996-202ENST00000486954 CABLES1Q8TDN4 633 aa16.07■□□□□ 0.16
LINC00996-202ENST00000486954 USP54Q70EL1 1684 aa16.06■□□□□ 0.16
LINC00996-202ENST00000486954 USP19O94966 1318 aa16.06■□□□□ 0.16
LINC00996-202ENST00000486954 SLIT3O75094 1523 aa16.05■□□□□ 0.16
LINC00996-202ENST00000486954 USP31Q70CQ4 1352 aa16.05■□□□□ 0.16
LINC00996-202ENST00000486954 CGNL1Q0VF96 1302 aa16.05■□□□□ 0.16
LINC00996-202ENST00000486954 NME9Q86XW9 330 aa16.05■□□□□ 0.16
LINC00996-202ENST00000486954 C8orf37Q96NL8 207 aa16.05■□□□□ 0.16
LINC00996-202ENST00000486954 PANK3Q9H999 370 aa16.05■□□□□ 0.16
LINC00996-202ENST00000486954 KCNH5Q8NCM2 988 aa16.04■□□□□ 0.16
LINC00996-202ENST00000486954 COG3Q96JB2 828 aa16.04■□□□□ 0.16
LINC00996-202ENST00000486954 OVOS2A0A0J9YW53 1432 aa16.03■□□□□ 0.16
LINC00996-202ENST00000486954 OVOS2Q6IE36 1432 aa16.03■□□□□ 0.16
LINC00996-202ENST00000486954 KNSTRNQ9Y448 316 aa16.03■□□□□ 0.16
LINC00996-202ENST00000486954 NGLY1Q96IV0 654 aa16.02■□□□□ 0.16
LINC00996-202ENST00000486954 PRDM11Q9NQV5 511 aa16.02■□□□□ 0.16
LINC00996-202ENST00000486954 COL14A1Q05707 1796 aaKnown RBP16.01■□□□□ 0.15
LINC00996-202ENST00000486954 SOX12O15370 315 aa16.01■□□□□ 0.15
LINC00996-202ENST00000486954 GCP02774 474 aa16.01■□□□□ 0.15
LINC00996-202ENST00000486954 CARD14Q9BXL6 1004 aa16.01■□□□□ 0.15
LINC00996-202ENST00000486954 NSD2O96028 1365 aa16■□□□□ 0.15
LINC00996-202ENST00000486954 PLCH1Q4KWH8 1693 aa16■□□□□ 0.15
LINC00996-202ENST00000486954 GGNBP2Q9H3C7 697 aa16■□□□□ 0.15
LINC00996-202ENST00000486954 KIAA0232Q92628 1395 aa16■□□□□ 0.15
LINC00996-202ENST00000486954 ANKRD26Q9UPS8 1709 aa15.99■□□□□ 0.15
LINC00996-202ENST00000486954 AFF2P51816 1311 aa15.99■□□□□ 0.15
LINC00996-202ENST00000486954 ZBTB7CA1YPR0 619 aa15.99■□□□□ 0.15
LINC00996-202ENST00000486954 FYB1O15117 783 aa15.99■□□□□ 0.15
LINC00996-202ENST00000486954 ZC3H6P61129 1189 aaKnown RBP15.99■□□□□ 0.15
LINC00996-202ENST00000486954 ZRANB1Q9UGI0 708 aa15.99■□□□□ 0.15
LINC00996-202ENST00000486954 CPDO75976 1380 aa15.99■□□□□ 0.15
LINC00996-202ENST00000486954 ZNF772Q68DY9 489 aaPredicted RBP15.98■□□□□ 0.15
LINC00996-202ENST00000486954 NWD2Q9ULI1 1742 aa15.98■□□□□ 0.15
LINC00996-202ENST00000486954 NFAT5O94916 1531 aa15.98■□□□□ 0.15
LINC00996-202ENST00000486954 SLIT2O94813 1529 aa15.96■□□□□ 0.15
LINC00996-202ENST00000486954 USP21Q9UK80 565 aa15.96■□□□□ 0.15
LINC00996-202ENST00000486954 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.96■□□□□ 0.15
LINC00996-202ENST00000486954 ABCC6O95255 1503 aa15.95■□□□□ 0.14
LINC00996-202ENST00000486954 LTN1O94822 1766 aa15.95■□□□□ 0.14
LINC00996-202ENST00000486954 FAM83GA6ND36 823 aa15.94■□□□□ 0.14
LINC00996-202ENST00000486954 ZNF316A6NFI3 1004 aaPredicted RBP15.94■□□□□ 0.14
LINC00996-202ENST00000486954 CHRNA2Q15822 529 aa15.94■□□□□ 0.14
LINC00996-202ENST00000486954 FNBP4Q8N3X1 1017 aaPredicted RBP15.94■□□□□ 0.14
LINC00996-202ENST00000486954 AATKQ6ZMQ8 1374 aa15.93■□□□□ 0.14
LINC00996-202ENST00000486954 BTG4Q9NY30 223 aa15.93■□□□□ 0.14
LINC00996-202ENST00000486954 LMO7Q8WWI1 1683 aa15.92■□□□□ 0.14
LINC00996-202ENST00000486954 NRAPQ86VF7 1730 aa15.92■□□□□ 0.14
LINC00996-202ENST00000486954 MORC1Q86VD1 984 aa15.92■□□□□ 0.14
LINC00996-202ENST00000486954 ARHGEF25Q86VW2 580 aa15.92■□□□□ 0.14
LINC00996-202ENST00000486954 UNC5CLQ8IV45 518 aa15.92■□□□□ 0.14
LINC00996-202ENST00000486954 TRPC5Q9UL62 973 aaPredicted RBP15.92■□□□□ 0.14
LINC00996-202ENST00000486954 NPC1L1Q9UHC9 1359 aa15.91■□□□□ 0.14
LINC00996-202ENST00000486954 BCL9LQ86UU0 1499 aa15.91■□□□□ 0.14
LINC00996-202ENST00000486954 RTL1A6NKG5 1358 aa15.9■□□□□ 0.14
LINC00996-202ENST00000486954 PER1O15534 1290 aaPredicted RBP15.9■□□□□ 0.14
LINC00996-202ENST00000486954 AMPHP49418 695 aa15.9■□□□□ 0.14
LINC00996-202ENST00000486954 EVA1CP58658 441 aa15.9■□□□□ 0.14
LINC00996-202ENST00000486954 AMER1Q5JTC6 1135 aaPredicted RBP15.9■□□□□ 0.14
LINC00996-202ENST00000486954 CCDC9Q9Y3X0 531 aaKnown RBP15.9■□□□□ 0.14
LINC00996-202ENST00000486954 ATRNO75882 1429 aa15.89■□□□□ 0.13
LINC00996-202ENST00000486954 DDX10Q13206 875 aaKnown RBP15.89■□□□□ 0.13
LINC00996-202ENST00000486954 CC2D1BQ5T0F9 858 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms