RNA–Protein interactions for RNA: ENST00000486524.1

SLX4-203, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX4, Length 3,075 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-203ENST00000486524 CLUAP1Q96AJ1 413 aa14.55□□□□□ -0.08
SLX4-203ENST00000486524 KIF13AQ9H1H9 1805 aa14.54□□□□□ -0.08
SLX4-203ENST00000486524 DIAPH1O60610 1272 aaKnown RBP14.54□□□□□ -0.08
SLX4-203ENST00000486524 CCDC27Q2M243 656 aa14.54□□□□□ -0.08
SLX4-203ENST00000486524 MYH16Q9H6N6 1097 aa14.54□□□□□ -0.08
SLX4-203ENST00000486524 NLRP1Q9C000 1473 aa14.54□□□□□ -0.08
SLX4-203ENST00000486524 NBR1Q14596 966 aa14.54□□□□□ -0.08
SLX4-203ENST00000486524 IGHDP01880 384 aa14.53□□□□□ -0.08
SLX4-203ENST00000486524 TMPOP42166 694 aaKnown RBP14.53□□□□□ -0.08
SLX4-203ENST00000486524 PDE3AQ14432 1141 aa14.53□□□□□ -0.08
SLX4-203ENST00000486524 PLEKHF1Q96S99 279 aa14.53□□□□□ -0.08
SLX4-203ENST00000486524 RLBP1P12271 317 aa14.52□□□□□ -0.08
SLX4-203ENST00000486524 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.52□□□□□ -0.08
SLX4-203ENST00000486524 WASLO00401 505 aaPredicted RBP14.52□□□□□ -0.09
SLX4-203ENST00000486524 ZRANB1Q9UGI0 708 aa14.52□□□□□ -0.09
SLX4-203ENST00000486524 COL3A1P02461 1466 aaPredicted RBP14.52□□□□□ -0.09
SLX4-203ENST00000486524 RIPK4P57078 832 aa14.51□□□□□ -0.09
SLX4-203ENST00000486524 NME9Q86XW9 330 aa14.51□□□□□ -0.09
SLX4-203ENST00000486524 TRIM35Q9UPQ4 493 aa14.51□□□□□ -0.09
SLX4-203ENST00000486524 SETD1AO15047 1707 aaKnown RBP14.5□□□□□ -0.09
SLX4-203ENST00000486524 TNRQ92752 1358 aa14.5□□□□□ -0.09
SLX4-203ENST00000486524 PPIP5K1Q6PFW1 1433 aa14.5□□□□□ -0.09
SLX4-203ENST00000486524 ANKRD26Q9UPS8 1709 aa14.5□□□□□ -0.09
SLX4-203ENST00000486524 NUTM2FA1L443 756 aa14.5□□□□□ -0.09
SLX4-203ENST00000486524 CEBPAP49715 358 aaPredicted RBP14.5□□□□□ -0.09
SLX4-203ENST00000486524 EXOSC9Q06265 439 aaKnown RBP14.5□□□□□ -0.09
SLX4-203ENST00000486524 POLKQ9UBT6 870 aa14.5□□□□□ -0.09
SLX4-203ENST00000486524 HMOX1P09601 288 aa14.49□□□□□ -0.09
SLX4-203ENST00000486524 NUDT16Q96DE0 195 aaKnown RBP14.49□□□□□ -0.09
SLX4-203ENST00000486524 EMILIN1Q9Y6C2 1016 aa14.49□□□□□ -0.09
SLX4-203ENST00000486524 DLC1Q96QB1 1528 aa14.49□□□□□ -0.09
SLX4-203ENST00000486524 NRXN3Q9Y4C0 1643 aa14.49□□□□□ -0.09
SLX4-203ENST00000486524 KIF20BQ96Q89 1820 aa14.49□□□□□ -0.09
SLX4-203ENST00000486524 MED14O60244 1454 aa14.49□□□□□ -0.09
SLX4-203ENST00000486524 ADGRB2O60241 1585 aa14.49□□□□□ -0.09
SLX4-203ENST00000486524 HDGFP51858 240 aaKnown RBP14.48□□□□□ -0.09
SLX4-203ENST00000486524 PRKAR2BP31323 418 aa14.47□□□□□ -0.09
SLX4-203ENST00000486524 SMC4Q9NTJ3 1288 aa14.47□□□□□ -0.09
SLX4-203ENST00000486524 LAS1LQ9Y4W2 734 aaKnown RBP14.47□□□□□ -0.09
SLX4-203ENST00000486524 ATP7BP35670 1465 aa14.47□□□□□ -0.09
SLX4-203ENST00000486524 FAM161AQ3B820 660 aa14.46□□□□□ -0.09
SLX4-203ENST00000486524 FTSJ3Q8IY81 847 aaKnown RBP14.46□□□□□ -0.09
SLX4-203ENST00000486524 RRS1Q15050 365 aaKnown RBP14.46□□□□□ -0.09
SLX4-203ENST00000486524 C8orf34Q49A92 452 aa14.45□□□□□ -0.1
SLX4-203ENST00000486524 PCDHB15Q9Y5E8 787 aa14.45□□□□□ -0.1
SLX4-203ENST00000486524 PNPLA6Q8IY17 1366 aa14.45□□□□□ -0.1
SLX4-203ENST00000486524 NEFMP07197 916 aa14.45□□□□□ -0.1
SLX4-203ENST00000486524 SLC26A8Q96RN1 970 aa14.45□□□□□ -0.1
SLX4-203ENST00000486524 CCDC61Q9Y6R9 512 aa14.45□□□□□ -0.1
SLX4-203ENST00000486524 TMEM2Q9UHN6 1383 aa14.44□□□□□ -0.1
SLX4-203ENST00000486524 ZKSCAN2Q63HK3 967 aa14.44□□□□□ -0.1
SLX4-203ENST00000486524 PNNQ9H307 717 aaKnown RBP14.44□□□□□ -0.1
SLX4-203ENST00000486524 SSH1Q8WYL5 1049 aa14.44□□□□□ -0.1
SLX4-203ENST00000486524 PHACTR3Q96KR7 559 aa14.44□□□□□ -0.1
SLX4-203ENST00000486524 THUMPD2Q9BTF0 503 aaKnown RBP14.44□□□□□ -0.1
SLX4-203ENST00000486524 RSPH6AQ9H0K4 717 aa14.44□□□□□ -0.1
SLX4-203ENST00000486524 MAP2P11137 1827 aaKnown RBP14.44□□□□□ -0.1
SLX4-203ENST00000486524 FCHSD2O94868 740 aa14.43□□□□□ -0.1
SLX4-203ENST00000486524 LTKP29376 864 aa14.43□□□□□ -0.1
SLX4-203ENST00000486524 COG3Q96JB2 828 aa14.43□□□□□ -0.1
SLX4-203ENST00000486524 ROBO2Q9HCK4 1378 aa14.43□□□□□ -0.1
SLX4-203ENST00000486524 NCBP3Q53F19 620 aaKnown RBP14.43□□□□□ -0.1
SLX4-203ENST00000486524 CPSF1Q10570 1443 aaKnown RBP14.43□□□□□ -0.1
SLX4-203ENST00000486524 EDC4Q6P2E9 1401 aaKnown RBP14.43□□□□□ -0.1
SLX4-203ENST00000486524 ANO8Q9HCE9 1232 aaPredicted RBP14.43□□□□□ -0.1
SLX4-203ENST00000486524 LRRC7Q96NW7 1537 aa14.42□□□□□ -0.1
SLX4-203ENST00000486524 PRR36Q9H6K5 1346 aa14.42□□□□□ -0.1
SLX4-203ENST00000486524 DZIP1LQ8IYY4 767 aaKnown RBP14.42□□□□□ -0.1
SLX4-203ENST00000486524 MVPQ14764 893 aaKnown RBP14.41□□□□□ -0.1
SLX4-203ENST00000486524 SOX12O15370 315 aa14.41□□□□□ -0.1
SLX4-203ENST00000486524 SLC4A3P48751 1232 aa14.41□□□□□ -0.1
SLX4-203ENST00000486524 NOB1Q9ULX3 412 aaKnown RBP14.41□□□□□ -0.1
SLX4-203ENST00000486524 CPS1P31327 1500 aa14.41□□□□□ -0.1
SLX4-203ENST00000486524 TRIM27P14373 513 aa14.4□□□□□ -0.1
SLX4-203ENST00000486524 ITPRIPQ8IWB1 547 aa14.4□□□□□ -0.1
SLX4-203ENST00000486524 UBR1Q8IWV7 1749 aa14.4□□□□□ -0.1
SLX4-203ENST00000486524 PMFBP1Q8TBY8 1022 aa14.4□□□□□ -0.1
SLX4-203ENST00000486524 FAM135BQ49AJ0 1406 aa14.39□□□□□ -0.11
SLX4-203ENST00000486524 IL13P35225 146 aa14.39□□□□□ -0.11
SLX4-203ENST00000486524 CT47B1P0C2W7 299 aaPredicted RBP14.39□□□□□ -0.11
SLX4-203ENST00000486524 IL16Q14005 1332 aa14.38□□□□□ -0.11
SLX4-203ENST00000486524 ADAMTS13Q76LX8 1427 aa14.38□□□□□ -0.11
SLX4-203ENST00000486524 ELL2O00472 640 aaPredicted RBP14.38□□□□□ -0.11
SLX4-203ENST00000486524 NFE2L2Q16236 605 aa14.38□□□□□ -0.11
SLX4-203ENST00000486524 CDC42BPGQ6DT37 1551 aa14.38□□□□□ -0.11
SLX4-203ENST00000486524 TECPR2O15040 1411 aa14.38□□□□□ -0.11
SLX4-203ENST00000486524 ATF7IPQ6VMQ6 1270 aa14.37□□□□□ -0.11
SLX4-203ENST00000486524 DDRGK1Q96HY6 314 aa14.37□□□□□ -0.11
SLX4-203ENST00000486524 RWDD1Q9H446 243 aaPredicted RBP14.37□□□□□ -0.11
SLX4-203ENST00000486524 EID1Q9Y6B2 187 aa14.37□□□□□ -0.11
SLX4-203ENST00000486524 ACEP12821 1306 aa14.36□□□□□ -0.11
SLX4-203ENST00000486524 SIRT1Q96EB6 747 aa14.36□□□□□ -0.11
SLX4-203ENST00000486524 PDZRN3Q9UPQ7 1066 aa14.36□□□□□ -0.11
SLX4-203ENST00000486524 ZNF692Q9BU19 519 aaPredicted RBP14.36□□□□□ -0.11
SLX4-203ENST00000486524 KNDC1Q76NI1 1749 aa14.36□□□□□ -0.11
SLX4-203ENST00000486524 FAM83GA6ND36 823 aa14.35□□□□□ -0.11
SLX4-203ENST00000486524 TMEM57Q8N5G2 664 aa14.35□□□□□ -0.11
SLX4-203ENST00000486524 DAXXQ9UER7 740 aaPredicted RBP14.35□□□□□ -0.11
SLX4-203ENST00000486524 AAMPQ13685 434 aa14.35□□□□□ -0.11
SLX4-203ENST00000486524 DCTN1Q14203 1278 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms