RNA–Protein interactions for RNA: ENST00000486446.2

PUDP-204, Transcript of pseudouridine 5'-phosphatase, human

TSL 2

Gene PUDP, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUDP-204	ENST00000486446	ARIH1	Q9Y4X5	557 aa	Predicted RBP	10.69	□□□□□ -0.7
PUDP-204	ENST00000486446	ARHGAP31	Q2M1Z3	1444 aa		10.68	□□□□□ -0.7
PUDP-204	ENST00000486446	HAP1	P54257	671 aa	Predicted RBP	10.68	□□□□□ -0.7
PUDP-204	ENST00000486446	ANKLE2	Q86XL3	938 aa		10.68	□□□□□ -0.7
PUDP-204	ENST00000486446	PSD	A5PKW4	1024 aa	Predicted RBP	10.67	□□□□□ -0.7
PUDP-204	ENST00000486446	VWDE	Q8N2E2	1590 aa		10.67	□□□□□ -0.7
PUDP-204	ENST00000486446	LMTK2	Q8IWU2	1503 aa		10.67	□□□□□ -0.7
PUDP-204	ENST00000486446	ROCK1	Q13464	1354 aa		10.66	□□□□□ -0.7
PUDP-204	ENST00000486446	DPYSL4	O14531	572 aa		10.66	□□□□□ -0.7
PUDP-204	ENST00000486446	NEURL4	Q96JN8	1562 aa		10.65	□□□□□ -0.7
PUDP-204	ENST00000486446	EFCAB6	Q5THR3	1501 aa		10.65	□□□□□ -0.7
PUDP-204	ENST00000486446	UBR1	Q8IWV7	1749 aa		10.65	□□□□□ -0.7
PUDP-204	ENST00000486446	RGS17	Q9UGC6	210 aa	Predicted RBP	10.65	□□□□□ -0.7
PUDP-204	ENST00000486446	UNC13B	O14795	1591 aa		10.65	□□□□□ -0.71
PUDP-204	ENST00000486446	KRTAP3-3	Q9BYR6	98 aa		10.64	□□□□□ -0.71
PUDP-204	ENST00000486446	KRTAP3-2	Q9BYR7	98 aa		10.64	□□□□□ -0.71
PUDP-204	ENST00000486446	PIK3C2B	O00750	1634 aa		10.64	□□□□□ -0.71
PUDP-204	ENST00000486446	NPHP4	O75161	1426 aa	Predicted RBP	10.64	□□□□□ -0.71
PUDP-204	ENST00000486446	TET3	O43151	1660 aa		10.63	□□□□□ -0.71
PUDP-204	ENST00000486446	RRBP1	Q9P2E9	1410 aa	Known RBP	10.63	□□□□□ -0.71
PUDP-204	ENST00000486446	SYNM	O15061	1565 aa		10.62	□□□□□ -0.71
PUDP-204	ENST00000486446	IQGAP1	P46940	1657 aa		10.62	□□□□□ -0.71
PUDP-204	ENST00000486446	GCC2	Q8IWJ2	1684 aa		10.62	□□□□□ -0.71
PUDP-204	ENST00000486446	MED14	O60244	1454 aa		10.61	□□□□□ -0.71
PUDP-204	ENST00000486446	RPRD2	Q5VT52	1461 aa	Known RBP	10.61	□□□□□ -0.71
PUDP-204	ENST00000486446	NOS1	P29475	1434 aa		10.61	□□□□□ -0.71
PUDP-204	ENST00000486446	FOSB	P53539	338 aa		10.61	□□□□□ -0.71
PUDP-204	ENST00000486446	KDM2A	Q9Y2K7	1162 aa		10.61	□□□□□ -0.71
PUDP-204	ENST00000486446	SCAF11	Q99590	1463 aa	Known RBP	10.61	□□□□□ -0.71
PUDP-204	ENST00000486446	IQGAP3	Q86VI3	1631 aa		10.6	□□□□□ -0.71
PUDP-204	ENST00000486446	IDI1	Q13907	227 aa		10.6	□□□□□ -0.71
PUDP-204	ENST00000486446	PDIA6	Q15084	440 aa		10.6	□□□□□ -0.71
PUDP-204	ENST00000486446	POTEE	Q6S8J3	1075 aa		10.6	□□□□□ -0.71
PUDP-204	ENST00000486446	TXNDC2	Q86VQ3	553 aa		10.6	□□□□□ -0.71
PUDP-204	ENST00000486446	EID1	Q9Y6B2	187 aa		10.6	□□□□□ -0.71
PUDP-204	ENST00000486446	NUP155	O75694	1391 aa		10.6	□□□□□ -0.71
PUDP-204	ENST00000486446	SLIT1	O75093	1534 aa		10.59	□□□□□ -0.71
PUDP-204	ENST00000486446	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.59	□□□□□ -0.71
PUDP-204	ENST00000486446	PTGER2	P43116	358 aa		10.59	□□□□□ -0.71
PUDP-204	ENST00000486446	PPP4R3B	Q5MIZ7	849 aa		10.59	□□□□□ -0.71
PUDP-204	ENST00000486446	ARHGAP23	Q9P227	1491 aa		10.59	□□□□□ -0.71
PUDP-204	ENST00000486446		E9PCH4	1651 aa		10.59	□□□□□ -0.71
PUDP-204	ENST00000486446	KDM5A	P29375	1690 aa	Known RBP	10.59	□□□□□ -0.71
PUDP-204	ENST00000486446	ADGRB3	O60242	1522 aa		10.58	□□□□□ -0.72
PUDP-204	ENST00000486446	CPS1	P31327	1500 aa		10.58	□□□□□ -0.72
PUDP-204	ENST00000486446	TMEM2	Q9UHN6	1383 aa		10.58	□□□□□ -0.72
PUDP-204	ENST00000486446	POTEA	Q6S8J7	498 aa		10.58	□□□□□ -0.72
PUDP-204	ENST00000486446	KCNV2	Q8TDN2	545 aa		10.58	□□□□□ -0.72
PUDP-204	ENST00000486446	ARHGEF1	Q92888	912 aa	Known RBP	10.58	□□□□□ -0.72
PUDP-204	ENST00000486446	SLC52A1	Q9NWF4	448 aa		10.58	□□□□□ -0.72
PUDP-204	ENST00000486446	LTK	P29376	864 aa		10.57	□□□□□ -0.72
PUDP-204	ENST00000486446	PBX2	P40425	430 aa		10.57	□□□□□ -0.72
PUDP-204	ENST00000486446	VSIG10	Q8N0Z9	540 aa		10.57	□□□□□ -0.72
PUDP-204	ENST00000486446	ZNF454	Q8N9F8	522 aa		10.57	□□□□□ -0.72
PUDP-204	ENST00000486446	BCAN	Q96GW7	911 aa		10.55	□□□□□ -0.72
PUDP-204	ENST00000486446	PCDHGA10	Q9Y5H3	936 aa		10.55	□□□□□ -0.72
PUDP-204	ENST00000486446	NAIP	Q13075	1403 aa		10.55	□□□□□ -0.72
PUDP-204	ENST00000486446	PHF14	O94880	888 aa		10.54	□□□□□ -0.72
PUDP-204	ENST00000486446	MYO5B	Q9ULV0	1848 aa		10.54	□□□□□ -0.72
PUDP-204	ENST00000486446	STRCP1	A6NGW2	1772 aa		10.53	□□□□□ -0.72
PUDP-204	ENST00000486446	ARHGAP33	O14559	1287 aa		10.53	□□□□□ -0.72
PUDP-204	ENST00000486446	PPP1R15A	O75807	674 aa	Predicted RBP	10.53	□□□□□ -0.72
PUDP-204	ENST00000486446	TRIM52	Q96A61	297 aa		10.53	□□□□□ -0.72
PUDP-204	ENST00000486446	BCL2L12	Q9HB09	334 aa		10.53	□□□□□ -0.72
PUDP-204	ENST00000486446	TMEM131L	A2VDJ0	1609 aa		10.53	□□□□□ -0.72
PUDP-204	ENST00000486446	HFM1	A2PYH4	1435 aa		10.52	□□□□□ -0.73
PUDP-204	ENST00000486446	HDGF	P51858	240 aa	Known RBP	10.52	□□□□□ -0.73
PUDP-204	ENST00000486446	CCER1	Q8TC90	406 aa	Predicted RBP	10.52	□□□□□ -0.73
PUDP-204	ENST00000486446	ZDHHC16	Q969W1	377 aa		10.52	□□□□□ -0.73
PUDP-204	ENST00000486446	AXIN2	Q9Y2T1	843 aa		10.52	□□□□□ -0.73
PUDP-204	ENST00000486446	SPHKAP	Q2M3C7	1700 aa		10.52	□□□□□ -0.73
PUDP-204	ENST00000486446	RIMS2	Q9UQ26	1411 aa		10.51	□□□□□ -0.73
PUDP-204	ENST00000486446	SLC26A8	Q96RN1	970 aa		10.51	□□□□□ -0.73
PUDP-204	ENST00000486446	LRRC7	Q96NW7	1537 aa		10.5	□□□□□ -0.73
PUDP-204	ENST00000486446	TYW1B	Q6NUM6	668 aa		10.5	□□□□□ -0.73
PUDP-204	ENST00000486446	EPAS1	Q99814	870 aa		10.5	□□□□□ -0.73
PUDP-204	ENST00000486446	ADAM33	Q9BZ11	813 aa		10.5	□□□□□ -0.73
PUDP-204	ENST00000486446	DAXX	Q9UER7	740 aa	Predicted RBP	10.5	□□□□□ -0.73
PUDP-204	ENST00000486446	CLSPN	Q9HAW4	1339 aa		10.5	□□□□□ -0.73
PUDP-204	ENST00000486446	ZFYVE9	O95405	1425 aa		10.5	□□□□□ -0.73
PUDP-204	ENST00000486446	LSM11	P83369	360 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
PUDP-204	ENST00000486446	NUTM2D	Q5VT03	806 aa	Predicted RBP	10.49	□□□□□ -0.73
PUDP-204	ENST00000486446	SPNS2	Q8IVW8	549 aa		10.49	□□□□□ -0.73
PUDP-204	ENST00000486446	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.49	□□□□□ -0.73
PUDP-204	ENST00000486446	DDX12P	Q92771	950 aa		10.49	□□□□□ -0.73
PUDP-204	ENST00000486446	FBXW7	Q969H0	707 aa		10.49	□□□□□ -0.73
PUDP-204	ENST00000486446	SRCAP	Q6ZRS2	3230 aa		10.48	□□□□□ -0.73
PUDP-204	ENST00000486446	PSEN2	P49810	448 aa		10.48	□□□□□ -0.73
PUDP-204	ENST00000486446	PLEKHG1	Q9ULL1	1385 aa		10.48	□□□□□ -0.73
PUDP-204	ENST00000486446	ZNF326	Q5BKZ1	582 aa	Known RBP	10.47	□□□□□ -0.73
PUDP-204	ENST00000486446	KCNA6	P17658	529 aa		10.46	□□□□□ -0.73
PUDP-204	ENST00000486446	DMRTA1	Q5VZB9	504 aa		10.46	□□□□□ -0.73
PUDP-204	ENST00000486446	PROSER2	Q86WR7	435 aa	Predicted RBP	10.46	□□□□□ -0.73
PUDP-204	ENST00000486446	KCNK17	Q96T54	332 aa		10.46	□□□□□ -0.73
PUDP-204	ENST00000486446	TRPM2	O94759	1503 aa		10.46	□□□□□ -0.74
PUDP-204	ENST00000486446	CLTCL1	P53675	1640 aa		10.46	□□□□□ -0.74
PUDP-204	ENST00000486446	PTPRE	P23469	700 aa		10.45	□□□□□ -0.74
PUDP-204	ENST00000486446	KIF1B	O60333	1816 aa		10.44	□□□□□ -0.74
PUDP-204	ENST00000486446	XIRP1	Q702N8	1843 aa	Known RBP	10.44	□□□□□ -0.74
PUDP-204	ENST00000486446	ALK	Q9UM73	1620 aa		10.44	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms