RNA–Protein interactions for RNA: ENST00000486420.1

C9orf16-202, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-202ENST00000486420 TNS3Q68CZ2 1445 aa17.25■□□□□ 0.35
C9orf16-202ENST00000486420 CABP1Q9NZU7 370 aa17.24■□□□□ 0.35
C9orf16-202ENST00000486420 CDK12Q9NYV4 1490 aaPredicted RBP17.23■□□□□ 0.35
C9orf16-202ENST00000486420 AFF2P51816 1311 aa17.21■□□□□ 0.35
C9orf16-202ENST00000486420 ABCA3Q99758 1704 aa17.21■□□□□ 0.35
C9orf16-202ENST00000486420 HSPA5P11021 654 aaKnown RBP17.21■□□□□ 0.35
C9orf16-202ENST00000486420 TTC21AQ8NDW8 1320 aa17.21■□□□□ 0.34
C9orf16-202ENST00000486420 TMC1Q8TDI8 760 aa17.2■□□□□ 0.34
C9orf16-202ENST00000486420 USP6P35125 1406 aa17.2■□□□□ 0.34
C9orf16-202ENST00000486420 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.19■□□□□ 0.34
C9orf16-202ENST00000486420 PAK3O75914 559 aaPredicted RBP17.19■□□□□ 0.34
C9orf16-202ENST00000486420 C8orf37Q96NL8 207 aa17.19■□□□□ 0.34
C9orf16-202ENST00000486420 CPSF1Q10570 1443 aaKnown RBP17.19■□□□□ 0.34
C9orf16-202ENST00000486420 TRPM3Q9HCF6 1732 aaPredicted RBP17.18■□□□□ 0.34
C9orf16-202ENST00000486420 KTN1Q86UP2 1357 aaKnown RBP17.18■□□□□ 0.34
C9orf16-202ENST00000486420 HAP1P54257 671 aaPredicted RBP17.18■□□□□ 0.34
C9orf16-202ENST00000486420 XPCQ01831 940 aaPredicted RBP17.17■□□□□ 0.34
C9orf16-202ENST00000486420 LMOD2Q6P5Q4 547 aa17.17■□□□□ 0.34
C9orf16-202ENST00000486420 NLRP13Q86W25 1043 aa17.17■□□□□ 0.34
C9orf16-202ENST00000486420 ANKRD36BQ8N2N9 1353 aa17.16■□□□□ 0.34
C9orf16-202ENST00000486420 EDC4Q6P2E9 1401 aaKnown RBP17.16■□□□□ 0.34
C9orf16-202ENST00000486420 ALS2Q96Q42 1657 aa17.16■□□□□ 0.34
C9orf16-202ENST00000486420 ADAMTS2O95450 1211 aa17.15■□□□□ 0.34
C9orf16-202ENST00000486420 ABTB2Q8N961 1025 aa17.15■□□□□ 0.34
C9orf16-202ENST00000486420 RXRBP28702 533 aa17.14■□□□□ 0.33
C9orf16-202ENST00000486420 NGLY1Q96IV0 654 aa17.14■□□□□ 0.33
C9orf16-202ENST00000486420 PLCH1Q4KWH8 1693 aa17.13■□□□□ 0.33
C9orf16-202ENST00000486420 NWD2Q9ULI1 1742 aa17.13■□□□□ 0.33
C9orf16-202ENST00000486420 AKAP12Q02952 1782 aa17.12■□□□□ 0.33
C9orf16-202ENST00000486420 KCNH5Q8NCM2 988 aa17.12■□□□□ 0.33
C9orf16-202ENST00000486420 SLC12A5Q9H2X9 1139 aa17.12■□□□□ 0.33
C9orf16-202ENST00000486420 TTC21BQ7Z4L5 1316 aa17.12■□□□□ 0.33
C9orf16-202ENST00000486420 RGS12O14924 1447 aa17.12■□□□□ 0.33
C9orf16-202ENST00000486420 SSH2Q76I76 1423 aa17.12■□□□□ 0.33
C9orf16-202ENST00000486420 CRYBG1Q9Y4K1 1723 aa17.11■□□□□ 0.33
C9orf16-202ENST00000486420 MON2Q7Z3U7 1717 aa17.1■□□□□ 0.33
C9orf16-202ENST00000486420 RBM6P78332 1123 aaKnown RBP17.1■□□□□ 0.33
C9orf16-202ENST00000486420 FNBP4Q8N3X1 1017 aaPredicted RBP17.1■□□□□ 0.33
C9orf16-202ENST00000486420 A0A1W2PP64 1363 aa17.1■□□□□ 0.33
C9orf16-202ENST00000486420 ATRNO75882 1429 aa17.1■□□□□ 0.33
C9orf16-202ENST00000486420 NLRP6P59044 892 aa17.09■□□□□ 0.33
C9orf16-202ENST00000486420 QTRT2Q9H974 415 aaKnown RBP17.09■□□□□ 0.33
C9orf16-202ENST00000486420 USP21Q9UK80 565 aa17.09■□□□□ 0.33
C9orf16-202ENST00000486420 CD163L1Q9NR16 1453 aa17.08■□□□□ 0.32
C9orf16-202ENST00000486420 USP31Q70CQ4 1352 aa17.08■□□□□ 0.32
C9orf16-202ENST00000486420 USP19O94966 1318 aa17.08■□□□□ 0.32
C9orf16-202ENST00000486420 TRPC5Q9UL62 973 aaPredicted RBP17.08■□□□□ 0.32
C9orf16-202ENST00000486420 SLIT2O94813 1529 aa17.07■□□□□ 0.32
C9orf16-202ENST00000486420 NRKQ7Z2Y5 1582 aa17.06■□□□□ 0.32
C9orf16-202ENST00000486420 BCL9LQ86UU0 1499 aa17.06■□□□□ 0.32
C9orf16-202ENST00000486420 CPDO75976 1380 aa17.05■□□□□ 0.32
C9orf16-202ENST00000486420 CGNL1Q0VF96 1302 aa17.05■□□□□ 0.32
C9orf16-202ENST00000486420 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
C9orf16-202ENST00000486420 PHRF1Q9P1Y6 1649 aaKnown RBP17.05■□□□□ 0.32
C9orf16-202ENST00000486420 NRAPQ86VF7 1730 aa17.04■□□□□ 0.32
C9orf16-202ENST00000486420 COG3Q96JB2 828 aa17.04■□□□□ 0.32
C9orf16-202ENST00000486420 COL14A1Q05707 1796 aaKnown RBP17.04■□□□□ 0.32
C9orf16-202ENST00000486420 NSD2O96028 1365 aa17.03■□□□□ 0.32
C9orf16-202ENST00000486420 GCP02774 474 aa17.03■□□□□ 0.32
C9orf16-202ENST00000486420 KIF7Q2M1P5 1343 aa17.02■□□□□ 0.32
C9orf16-202ENST00000486420 SLIT3O75094 1523 aa17.02■□□□□ 0.32
C9orf16-202ENST00000486420 USP54Q70EL1 1684 aa17.02■□□□□ 0.32
C9orf16-202ENST00000486420 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.02■□□□□ 0.32
C9orf16-202ENST00000486420 PRDM11Q9NQV5 511 aa17.02■□□□□ 0.32
C9orf16-202ENST00000486420 GLI3P10071 1580 aa17.02■□□□□ 0.31
C9orf16-202ENST00000486420 MYOM1P52179 1685 aa17.01■□□□□ 0.31
C9orf16-202ENST00000486420 CCDC7Q96M83 1385 aa17.01■□□□□ 0.31
C9orf16-202ENST00000486420 ABCC6O95255 1503 aa17.01■□□□□ 0.31
C9orf16-202ENST00000486420 PIK3C2AO00443 1686 aa17.01■□□□□ 0.31
C9orf16-202ENST00000486420 CABLES1Q8TDN4 633 aa17■□□□□ 0.31
C9orf16-202ENST00000486420 KNSTRNQ9Y448 316 aa17■□□□□ 0.31
C9orf16-202ENST00000486420 UNC5CLQ8IV45 518 aa16.99■□□□□ 0.31
C9orf16-202ENST00000486420 NSD3Q9BZ95 1437 aa16.98■□□□□ 0.31
C9orf16-202ENST00000486420 NUTM2GQ5VZR2 741 aa16.98■□□□□ 0.31
C9orf16-202ENST00000486420 UPF1Q92900 1129 aaKnown RBP eCLIP16.98■□□□□ 0.31
C9orf16-202ENST00000486420 PANK3Q9H999 370 aa16.98■□□□□ 0.31
C9orf16-202ENST00000486420 OVOS2A0A0J9YW53 1432 aa16.97■□□□□ 0.31
C9orf16-202ENST00000486420 OVOS2Q6IE36 1432 aa16.97■□□□□ 0.31
C9orf16-202ENST00000486420 NME9Q86XW9 330 aa16.97■□□□□ 0.31
C9orf16-202ENST00000486420 AATKQ6ZMQ8 1374 aa16.97■□□□□ 0.31
C9orf16-202ENST00000486420 KIAA0232Q92628 1395 aa16.97■□□□□ 0.31
C9orf16-202ENST00000486420 FYB1O15117 783 aa16.96■□□□□ 0.31
C9orf16-202ENST00000486420 GJD4Q96KN9 370 aaPredicted RBP16.96■□□□□ 0.31
C9orf16-202ENST00000486420 KIF24Q5T7B8 1368 aa16.96■□□□□ 0.31
C9orf16-202ENST00000486420 BRWD3Q6RI45 1802 aa16.96■□□□□ 0.3
C9orf16-202ENST00000486420 WASHC2AQ641Q2 1341 aa16.96■□□□□ 0.3
C9orf16-202ENST00000486420 EP400Q96L91 3159 aa16.95■□□□□ 0.3
C9orf16-202ENST00000486420 C11orf95C9JLR9 678 aaPredicted RBP16.95■□□□□ 0.3
C9orf16-202ENST00000486420 FAM83GA6ND36 823 aa16.94■□□□□ 0.3
C9orf16-202ENST00000486420 ZC3H6P61129 1189 aaKnown RBP16.94■□□□□ 0.3
C9orf16-202ENST00000486420 ARHGEF25Q86VW2 580 aa16.94■□□□□ 0.3
C9orf16-202ENST00000486420 CARD14Q9BXL6 1004 aa16.94■□□□□ 0.3
C9orf16-202ENST00000486420 PLEKHG5O94827 1062 aa16.93■□□□□ 0.3
C9orf16-202ENST00000486420 EVA1CP58658 441 aa16.93■□□□□ 0.3
C9orf16-202ENST00000486420 VPS72Q15906 364 aa16.93■□□□□ 0.3
C9orf16-202ENST00000486420 BTG4Q9NY30 223 aa16.93■□□□□ 0.3
C9orf16-202ENST00000486420 KIF20BQ96Q89 1820 aa16.93■□□□□ 0.3
C9orf16-202ENST00000486420 RTL1A6NKG5 1358 aa16.92■□□□□ 0.3
C9orf16-202ENST00000486420 NPC1L1Q9UHC9 1359 aa16.92■□□□□ 0.3
C9orf16-202ENST00000486420 NFAT5O94916 1531 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms