RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 FBXO31Q5XUX0 539 aaPredicted RBP22.45■■□□□ 1.18
TNXB-205ENST00000486148 ATAD2Q6PL18 1390 aa22.45■■□□□ 1.18
TNXB-205ENST00000486148 POGKQ9P215 609 aa22.44■■□□□ 1.18
TNXB-205ENST00000486148 NLRP1Q9C000 1473 aa22.44■■□□□ 1.18
TNXB-205ENST00000486148 TMPOP42166 694 aaKnown RBP22.44■■□□□ 1.18
TNXB-205ENST00000486148 TERF2IPQ9NYB0 399 aa22.43■■□□□ 1.18
TNXB-205ENST00000486148 TRIM35Q9UPQ4 493 aa22.43■■□□□ 1.18
TNXB-205ENST00000486148 CLTCQ00610 1675 aaKnown RBP22.42■■□□□ 1.18
TNXB-205ENST00000486148 ANKRD26Q9UPS8 1709 aa22.42■■□□□ 1.18
TNXB-205ENST00000486148 MVPQ14764 893 aaKnown RBP22.42■■□□□ 1.18
TNXB-205ENST00000486148 PDZRN3Q9UPQ7 1066 aa22.42■■□□□ 1.18
TNXB-205ENST00000486148 EXOSC9Q06265 439 aaKnown RBP22.41■■□□□ 1.18
TNXB-205ENST00000486148 ZKSCAN2Q63HK3 967 aa22.41■■□□□ 1.18
TNXB-205ENST00000486148 MED14O60244 1454 aa22.39■■□□□ 1.18
TNXB-205ENST00000486148 ALKQ9UM73 1620 aa22.39■■□□□ 1.17
TNXB-205ENST00000486148 DZIP1LQ8IYY4 767 aaKnown RBP22.38■■□□□ 1.17
TNXB-205ENST00000486148 CDK19Q9BWU1 502 aa22.38■■□□□ 1.17
TNXB-205ENST00000486148 RWDD1Q9H446 243 aaPredicted RBP22.38■■□□□ 1.17
TNXB-205ENST00000486148 CT47B1P0C2W7 299 aaPredicted RBP22.38■■□□□ 1.17
TNXB-205ENST00000486148 FTSJ3Q8IY81 847 aaKnown RBP22.37■■□□□ 1.17
TNXB-205ENST00000486148 SMC4Q9NTJ3 1288 aa22.37■■□□□ 1.17
TNXB-205ENST00000486148 ARHGEF40Q8TER5 1519 aa22.36■■□□□ 1.17
TNXB-205ENST00000486148 CABP1Q9NZU7 370 aa22.36■■□□□ 1.17
TNXB-205ENST00000486148 SSH1Q8WYL5 1049 aa22.36■■□□□ 1.17
TNXB-205ENST00000486148 HDGFL2Q7Z4V5 671 aaPredicted RBP22.35■■□□□ 1.17
TNXB-205ENST00000486148 DIAPH1O60610 1272 aaKnown RBP22.35■■□□□ 1.17
TNXB-205ENST00000486148 TRIM27P14373 513 aa22.35■■□□□ 1.17
TNXB-205ENST00000486148 RIPK4P57078 832 aa22.34■■□□□ 1.17
TNXB-205ENST00000486148 PNPLA6Q8IY17 1366 aa22.34■■□□□ 1.17
TNXB-205ENST00000486148 STAG3Q9UJ98 1225 aa22.33■■□□□ 1.17
TNXB-205ENST00000486148 ZMYM3Q14202 1370 aa22.32■■□□□ 1.16
TNXB-205ENST00000486148 FRAT2O75474 233 aaPredicted RBP22.32■■□□□ 1.16
TNXB-205ENST00000486148 IL16Q14005 1332 aa22.32■■□□□ 1.16
TNXB-205ENST00000486148 KIF20BQ96Q89 1820 aa22.32■■□□□ 1.16
TNXB-205ENST00000486148 FBLN1P23142 703 aa22.31■■□□□ 1.16
TNXB-205ENST00000486148 ATF7IPQ6VMQ6 1270 aa22.3■■□□□ 1.16
TNXB-205ENST00000486148 NOB1Q9ULX3 412 aaKnown RBP22.3■■□□□ 1.16
TNXB-205ENST00000486148 WAPLQ7Z5K2 1190 aa22.3■■□□□ 1.16
TNXB-205ENST00000486148 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.3■■□□□ 1.16
TNXB-205ENST00000486148 ITPRIPQ8IWB1 547 aa22.29■■□□□ 1.16
TNXB-205ENST00000486148 RSPH6AQ9H0K4 717 aa22.28■■□□□ 1.16
TNXB-205ENST00000486148 CYB5RLQ6IPT4 315 aa22.27■■□□□ 1.16
TNXB-205ENST00000486148 LRRC7Q96NW7 1537 aa22.27■■□□□ 1.16
TNXB-205ENST00000486148 DDX19BQ9UMR2 479 aa22.27■■□□□ 1.16
TNXB-205ENST00000486148 TBC1D32Q96NH3 1257 aa22.26■■□□□ 1.15
TNXB-205ENST00000486148 POLKQ9UBT6 870 aa22.26■■□□□ 1.15
TNXB-205ENST00000486148 TMEM57Q8N5G2 664 aa22.25■■□□□ 1.15
TNXB-205ENST00000486148 PNNQ9H307 717 aaKnown RBP22.25■■□□□ 1.15
TNXB-205ENST00000486148 CDC42BPGQ6DT37 1551 aa22.25■■□□□ 1.15
TNXB-205ENST00000486148 FCHSD2O94868 740 aa22.25■■□□□ 1.15
TNXB-205ENST00000486148 HDAC1Q13547 482 aaPredicted RBP22.25■■□□□ 1.15
TNXB-205ENST00000486148 BECN1Q14457 450 aa22.25■■□□□ 1.15
TNXB-205ENST00000486148 A2ML1A8K2U0 1454 aa22.25■■□□□ 1.15
TNXB-205ENST00000486148 PRKAR2BP31323 418 aa22.24■■□□□ 1.15
TNXB-205ENST00000486148 UPF2Q9HAU5 1272 aaKnown RBP22.24■■□□□ 1.15
TNXB-205ENST00000486148 FAM69CQ0P6D2 419 aa22.24■■□□□ 1.15
TNXB-205ENST00000486148 FAM43AQ8N2R8 423 aa22.24■■□□□ 1.15
TNXB-205ENST00000486148 DLC1Q96QB1 1528 aa22.23■■□□□ 1.15
TNXB-205ENST00000486148 FAM135BQ49AJ0 1406 aa22.23■■□□□ 1.15
TNXB-205ENST00000486148 PKNOX2Q96KN3 472 aa22.23■■□□□ 1.15
TNXB-205ENST00000486148 SETD1AO15047 1707 aaKnown RBP22.22■■□□□ 1.15
TNXB-205ENST00000486148 ATP7BP35670 1465 aa22.22■■□□□ 1.15
TNXB-205ENST00000486148 RIMS2Q9UQ26 1411 aa22.22■■□□□ 1.15
TNXB-205ENST00000486148 KIF16BQ96L93 1317 aa22.21■■□□□ 1.15
TNXB-205ENST00000486148 RIMBP3CA6NJZ7 1639 aa22.21■■□□□ 1.15
TNXB-205ENST00000486148 RIMBP3BA6NNM3 1639 aa22.21■■□□□ 1.15
TNXB-205ENST00000486148 RIMBP3Q9UFD9 1639 aa22.21■■□□□ 1.15
TNXB-205ENST00000486148 SLKQ9H2G2 1235 aaPredicted RBP22.21■■□□□ 1.15
TNXB-205ENST00000486148 ZBTB40Q9NUA8 1239 aa22.21■■□□□ 1.15
TNXB-205ENST00000486148 PHACTR3Q96KR7 559 aa22.2■■□□□ 1.14
TNXB-205ENST00000486148 HMOX1P09601 288 aa22.2■■□□□ 1.14
TNXB-205ENST00000486148 MAP2P11137 1827 aaKnown RBP22.19■■□□□ 1.14
TNXB-205ENST00000486148 SMC5Q8IY18 1101 aa22.19■■□□□ 1.14
TNXB-205ENST00000486148 SPATA31D1Q6ZQQ2 1576 aa22.19■■□□□ 1.14
TNXB-205ENST00000486148 TSPOAP1O95153 1857 aa22.19■■□□□ 1.14
TNXB-205ENST00000486148 IPO8O15397 1037 aaKnown RBP22.18■■□□□ 1.14
TNXB-205ENST00000486148 ALDH1L2Q3SY69 923 aa22.18■■□□□ 1.14
TNXB-205ENST00000486148 EMILIN1Q9Y6C2 1016 aa22.18■■□□□ 1.14
TNXB-205ENST00000486148 THUMPD2Q9BTF0 503 aaKnown RBP22.18■■□□□ 1.14
TNXB-205ENST00000486148 TBC1D2Q9BYX2 928 aa22.18■■□□□ 1.14
TNXB-205ENST00000486148 AGLP35573 1532 aa22.18■■□□□ 1.14
TNXB-205ENST00000486148 MLECQ14165 292 aa22.17■■□□□ 1.14
TNXB-205ENST00000486148 DIP2BQ9P265 1576 aa22.17■■□□□ 1.14
TNXB-205ENST00000486148 REREQ9P2R6 1566 aa22.17■■□□□ 1.14
TNXB-205ENST00000486148 ANTXR1Q9H6X2 564 aa22.17■■□□□ 1.14
TNXB-205ENST00000486148 ZRANB1Q9UGI0 708 aa22.16■■□□□ 1.14
TNXB-205ENST00000486148 NFE2L2Q16236 605 aa22.16■■□□□ 1.14
TNXB-205ENST00000486148 NME9Q86XW9 330 aa22.16■■□□□ 1.14
TNXB-205ENST00000486148 PPP6R1Q9UPN7 881 aa22.16■■□□□ 1.14
TNXB-205ENST00000486148 CPSF1Q10570 1443 aaKnown RBP22.15■■□□□ 1.14
TNXB-205ENST00000486148 PPIP5K1Q6PFW1 1433 aa22.15■■□□□ 1.14
TNXB-205ENST00000486148 WASLO00401 505 aaPredicted RBP22.14■■□□□ 1.14
TNXB-205ENST00000486148 NRXN3Q9Y4C0 1643 aa22.14■■□□□ 1.13
TNXB-205ENST00000486148 IL13P35225 146 aa22.14■■□□□ 1.13
TNXB-205ENST00000486148 MFAP1P55081 439 aaKnown RBP22.14■■□□□ 1.13
TNXB-205ENST00000486148 METP08581 1390 aa22.13■■□□□ 1.13
TNXB-205ENST00000486148 EDC4Q6P2E9 1401 aaKnown RBP22.13■■□□□ 1.13
TNXB-205ENST00000486148 NCKAP5LQ9HCH0 1330 aa22.13■■□□□ 1.13
TNXB-205ENST00000486148 VAMP4O75379 141 aa22.12■■□□□ 1.13
TNXB-205ENST00000486148 TSPYL6Q8N831 410 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms