RNA–Protein interactions for RNA: ENST00000486078.1

GTF2B-206, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-206ENST00000486078 GPHNQ9NQX3 736 aaPredicted RBP8.01□□□□□ -1.13
GTF2B-206ENST00000486078 AFF2P51816 1311 aa8.01□□□□□ -1.13
GTF2B-206ENST00000486078 COL16A1Q07092 1604 aaPredicted RBP8□□□□□ -1.13
GTF2B-206ENST00000486078 MSH6P52701 1360 aa8□□□□□ -1.13
GTF2B-206ENST00000486078 MAP3K1Q13233 1512 aa8□□□□□ -1.13
GTF2B-206ENST00000486078 TRAK2O60296 914 aa8□□□□□ -1.13
GTF2B-206ENST00000486078 HOXB3P14651 431 aaPredicted RBP8□□□□□ -1.13
GTF2B-206ENST00000486078 FAM117AQ9C073 453 aa8□□□□□ -1.13
GTF2B-206ENST00000486078 QTRT2Q9H974 415 aaKnown RBP8□□□□□ -1.13
GTF2B-206ENST00000486078 RGS12O14924 1447 aa8□□□□□ -1.13
GTF2B-206ENST00000486078 UBR1Q8IWV7 1749 aa8□□□□□ -1.13
GTF2B-206ENST00000486078 CCDC18Q5T9S5 1454 aa8□□□□□ -1.13
GTF2B-206ENST00000486078 RTEL1-TNFRSF6BF6WH68 1400 aa7.99□□□□□ -1.13
GTF2B-206ENST00000486078 PDE4AP27815 886 aa7.99□□□□□ -1.13
GTF2B-206ENST00000486078 RBM6P78332 1123 aaKnown RBP7.99□□□□□ -1.13
GTF2B-206ENST00000486078 EEA1Q15075 1411 aa7.99□□□□□ -1.13
GTF2B-206ENST00000486078 LCE2DQ5TA82 110 aaPredicted RBP7.99□□□□□ -1.13
GTF2B-206ENST00000486078 FGD6Q6ZV73 1430 aa7.99□□□□□ -1.13
GTF2B-206ENST00000486078 DDRGK1Q96HY6 314 aa7.99□□□□□ -1.13
GTF2B-206ENST00000486078 ARIH1Q9Y4X5 557 aaPredicted RBP7.99□□□□□ -1.13
GTF2B-206ENST00000486078 ZNF644Q9H582 1327 aaPredicted RBP7.99□□□□□ -1.13
GTF2B-206ENST00000486078 ATAD2Q6PL18 1390 aa7.98□□□□□ -1.13
GTF2B-206ENST00000486078 CCNB3Q8WWL7 1395 aa7.98□□□□□ -1.13
GTF2B-206ENST00000486078 RIMBP2O15034 1052 aa7.98□□□□□ -1.13
GTF2B-206ENST00000486078 RBM26Q5T8P6 1007 aaKnown RBP7.98□□□□□ -1.13
GTF2B-206ENST00000486078 ZNF710Q8N1W2 664 aa7.98□□□□□ -1.13
GTF2B-206ENST00000486078 SLC26A8Q96RN1 970 aa7.98□□□□□ -1.13
GTF2B-206ENST00000486078 ZSWIM6Q9HCJ5 1215 aa7.98□□□□□ -1.13
GTF2B-206ENST00000486078 NCOA2Q15596 1464 aa7.98□□□□□ -1.13
GTF2B-206ENST00000486078 SLIT1O75093 1534 aa7.98□□□□□ -1.13
GTF2B-206ENST00000486078 FOXK1P85037 733 aa7.97□□□□□ -1.13
GTF2B-206ENST00000486078 ERVK-7P63135 1459 aa7.97□□□□□ -1.13
GTF2B-206ENST00000486078 ARHGAP23Q9P227 1491 aa7.97□□□□□ -1.13
GTF2B-206ENST00000486078 SHPRHQ149N8 1683 aa7.97□□□□□ -1.13
GTF2B-206ENST00000486078 PRDM15P57071 1507 aaPredicted RBP7.97□□□□□ -1.13
GTF2B-206ENST00000486078 CFAP65Q6ZU64 1925 aaKnown RBP7.96□□□□□ -1.13
GTF2B-206ENST00000486078 LOC105371045A0A1W2PR82 267 aa7.96□□□□□ -1.14
GTF2B-206ENST00000486078 AEBP1Q8IUX7 1158 aa7.96□□□□□ -1.14
GTF2B-206ENST00000486078 CRISPLD2Q9H0B8 497 aa7.96□□□□□ -1.14
GTF2B-206ENST00000486078 TIAM1Q13009 1591 aa7.96□□□□□ -1.14
GTF2B-206ENST00000486078 CASKIN1Q8WXD9 1431 aa7.95□□□□□ -1.14
GTF2B-206ENST00000486078 MBD5Q9P267 1494 aa7.95□□□□□ -1.14
GTF2B-206ENST00000486078 SLC34A2O95436 690 aa7.95□□□□□ -1.14
GTF2B-206ENST00000486078 NGLY1Q96IV0 654 aa7.95□□□□□ -1.14
GTF2B-206ENST00000486078 C8orf37Q96NL8 207 aa7.95□□□□□ -1.14
GTF2B-206ENST00000486078 POTEMA6NI47 508 aa7.94□□□□□ -1.14
GTF2B-206ENST00000486078 HOXB1P14653 301 aaPredicted RBP7.94□□□□□ -1.14
GTF2B-206ENST00000486078 TMCO4Q5TGY1 634 aa7.94□□□□□ -1.14
GTF2B-206ENST00000486078 POTEGQ6S5H5 508 aa7.94□□□□□ -1.14
GTF2B-206ENST00000486078 RGS22Q8NE09 1264 aa7.94□□□□□ -1.14
GTF2B-206ENST00000486078 CLUAP1Q96AJ1 413 aa7.94□□□□□ -1.14
GTF2B-206ENST00000486078 LARP6Q9BRS8 491 aaKnown RBP7.94□□□□□ -1.14
GTF2B-206ENST00000486078 NKTRP30414 1462 aaKnown RBP7.94□□□□□ -1.14
GTF2B-206ENST00000486078 ABCC3O15438 1527 aa7.93□□□□□ -1.14
GTF2B-206ENST00000486078 PLEKHG3A1L390 1219 aa7.93□□□□□ -1.14
GTF2B-206ENST00000486078 DSG2Q14126 1118 aa7.93□□□□□ -1.14
GTF2B-206ENST00000486078 CCDC125Q86Z20 511 aa7.93□□□□□ -1.14
GTF2B-206ENST00000486078 PLPP6Q8IY26 295 aa7.93□□□□□ -1.14
GTF2B-206ENST00000486078 TMEM2Q9UHN6 1383 aa7.93□□□□□ -1.14
GTF2B-206ENST00000486078 AHDC1Q5TGY3 1603 aaPredicted RBP7.92□□□□□ -1.14
GTF2B-206ENST00000486078 ONECUT3O60422 494 aaPredicted RBP7.92□□□□□ -1.14
GTF2B-206ENST00000486078 GPR153Q6NV75 609 aa7.92□□□□□ -1.14
GTF2B-206ENST00000486078 CCDC97Q96F63 343 aaPredicted RBP7.92□□□□□ -1.14
GTF2B-206ENST00000486078 GOPCQ9HD26 462 aa7.92□□□□□ -1.14
GTF2B-206ENST00000486078 SERPINA10Q9UK55 444 aa7.92□□□□□ -1.14
GTF2B-206ENST00000486078 TET3O43151 1660 aa7.92□□□□□ -1.14
GTF2B-206ENST00000486078 KDM5AP29375 1690 aaKnown RBP7.92□□□□□ -1.14
GTF2B-206ENST00000486078 ATF3P18847 181 aa7.91□□□□□ -1.14
GTF2B-206ENST00000486078 DIP2AQ14689 1571 aa7.91□□□□□ -1.14
GTF2B-206ENST00000486078 NWD1Q149M9 1564 aa7.91□□□□□ -1.14
GTF2B-206ENST00000486078 MFSD10Q14728 455 aa7.9□□□□□ -1.14
GTF2B-206ENST00000486078 PCDH10Q9P2E7 1040 aa7.9□□□□□ -1.14
GTF2B-206ENST00000486078 MTMR7Q9Y216 660 aa7.9□□□□□ -1.14
GTF2B-206ENST00000486078 CEP152O94986 1710 aa7.89□□□□□ -1.15
GTF2B-206ENST00000486078 PIK3C2BO00750 1634 aa7.89□□□□□ -1.15
GTF2B-206ENST00000486078 LRP5O75197 1615 aa7.89□□□□□ -1.15
GTF2B-206ENST00000486078 CCDC141Q6ZP82 1450 aa7.89□□□□□ -1.15
GTF2B-206ENST00000486078 TSPY4P0CV99 314 aa7.89□□□□□ -1.15
GTF2B-206ENST00000486078 TSPY10P0CW01 314 aa7.89□□□□□ -1.15
GTF2B-206ENST00000486078 MLLT3P42568 568 aaPredicted RBP7.89□□□□□ -1.15
GTF2B-206ENST00000486078 PPP1R15BQ5SWA1 713 aa7.89□□□□□ -1.15
GTF2B-206ENST00000486078 RSPH4AQ5TD94 716 aa7.89□□□□□ -1.15
GTF2B-206ENST00000486078 IFFO2Q5TF58 517 aa7.89□□□□□ -1.15
GTF2B-206ENST00000486078 BRINP3Q76B58 766 aa7.89□□□□□ -1.15
GTF2B-206ENST00000486078 PTCD2Q8WV60 388 aaKnown RBP7.89□□□□□ -1.15
GTF2B-206ENST00000486078 MARVELD3Q96A59 401 aa7.89□□□□□ -1.15
GTF2B-206ENST00000486078 DDX27Q96GQ7 796 aaKnown RBP7.89□□□□□ -1.15
GTF2B-206ENST00000486078 FYCO1Q9BQS8 1478 aa7.88□□□□□ -1.15
GTF2B-206ENST00000486078 MTUS2Q5JR59 1369 aa7.88□□□□□ -1.15
GTF2B-206ENST00000486078 TBC1D12O60347 775 aa7.88□□□□□ -1.15
GTF2B-206ENST00000486078 ADAMTS2O95450 1211 aa7.88□□□□□ -1.15
GTF2B-206ENST00000486078 HMGB1P09429 215 aaKnown RBP7.88□□□□□ -1.15
GTF2B-206ENST00000486078 YY1P25490 414 aa7.88□□□□□ -1.15
GTF2B-206ENST00000486078 EMP3P54852 163 aa7.88□□□□□ -1.15
GTF2B-206ENST00000486078 ARSIQ5FYB1 569 aa7.88□□□□□ -1.15
GTF2B-206ENST00000486078 LRRC59Q96AG4 307 aaKnown RBP7.88□□□□□ -1.15
GTF2B-206ENST00000486078 C19orf44Q9H6X5 657 aa7.88□□□□□ -1.15
GTF2B-206ENST00000486078 USP21Q9UK80 565 aa7.88□□□□□ -1.15
GTF2B-206ENST00000486078 TRPC5Q9UL62 973 aaPredicted RBP7.88□□□□□ -1.15
GTF2B-206ENST00000486078 EFCAB6Q5THR3 1501 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms