RNA–Protein interactions for RNA: ENST00000485272.5

RIPPLY3-202, Transcript of ripply transcriptional repressor 3, humanhuman

TSL 1 (best)

Gene RIPPLY3, Length 2,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-202ENST00000485272 NGDNQ8NEJ9 315 aaKnown RBP16.36■□□□□ 0.21
RIPPLY3-202ENST00000485272 ANO8Q9HCE9 1232 aaPredicted RBP16.36■□□□□ 0.21
RIPPLY3-202ENST00000485272 POLR3AO14802 1390 aaPredicted RBP16.35■□□□□ 0.21
RIPPLY3-202ENST00000485272 NEFLP07196 543 aa16.35■□□□□ 0.21
RIPPLY3-202ENST00000485272 DEKP35659 375 aaKnown RBP16.35■□□□□ 0.21
RIPPLY3-202ENST00000485272 SLAIN2Q9P270 581 aa16.35■□□□□ 0.21
RIPPLY3-202ENST00000485272 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.34■□□□□ 0.21
RIPPLY3-202ENST00000485272 ZNF692Q9BU19 519 aaPredicted RBP16.34■□□□□ 0.21
RIPPLY3-202ENST00000485272 PRKRIP1Q9H875 184 aaPredicted RBP16.34■□□□□ 0.21
RIPPLY3-202ENST00000485272 FOXO3O43524 673 aa16.33■□□□□ 0.21
RIPPLY3-202ENST00000485272 ERICH6BQ5W0A0 696 aa16.33■□□□□ 0.21
RIPPLY3-202ENST00000485272 NRKQ7Z2Y5 1582 aa16.32■□□□□ 0.2
RIPPLY3-202ENST00000485272 USP6P35125 1406 aa16.32■□□□□ 0.2
RIPPLY3-202ENST00000485272 KIF20BQ96Q89 1820 aa16.32■□□□□ 0.2
RIPPLY3-202ENST00000485272 DDX17Q92841 729 aaKnown RBP16.31■□□□□ 0.2
RIPPLY3-202ENST00000485272 CGNL1Q0VF96 1302 aa16.31■□□□□ 0.2
RIPPLY3-202ENST00000485272 EDC4Q6P2E9 1401 aaKnown RBP16.31■□□□□ 0.2
RIPPLY3-202ENST00000485272 FYB1O15117 783 aa16.31■□□□□ 0.2
RIPPLY3-202ENST00000485272 XPCQ01831 940 aaPredicted RBP16.31■□□□□ 0.2
RIPPLY3-202ENST00000485272 KIF1AQ12756 1690 aa16.3■□□□□ 0.2
RIPPLY3-202ENST00000485272 PSME1Q06323 249 aa16.29■□□□□ 0.2
RIPPLY3-202ENST00000485272 BRINP3Q76B58 766 aa16.29■□□□□ 0.2
RIPPLY3-202ENST00000485272 GGNBP2Q9H3C7 697 aa16.29■□□□□ 0.2
RIPPLY3-202ENST00000485272 SSH2Q76I76 1423 aa16.29■□□□□ 0.2
RIPPLY3-202ENST00000485272 NME9Q86XW9 330 aa16.29■□□□□ 0.2
RIPPLY3-202ENST00000485272 FBXO41Q8TF61 875 aa16.29■□□□□ 0.2
RIPPLY3-202ENST00000485272 ZRANB1Q9UGI0 708 aa16.29■□□□□ 0.2
RIPPLY3-202ENST00000485272 TTC21BQ7Z4L5 1316 aa16.29■□□□□ 0.2
RIPPLY3-202ENST00000485272 ANKRD26Q9UPS8 1709 aa16.28■□□□□ 0.2
RIPPLY3-202ENST00000485272 NPC1L1Q9UHC9 1359 aa16.28■□□□□ 0.2
RIPPLY3-202ENST00000485272 PARD3Q8TEW0 1356 aa16.27■□□□□ 0.2
RIPPLY3-202ENST00000485272 PAK3O75914 559 aaPredicted RBP16.26■□□□□ 0.19
RIPPLY3-202ENST00000485272 PIK3C2AO00443 1686 aa16.25■□□□□ 0.19
RIPPLY3-202ENST00000485272 TRPM3Q9HCF6 1732 aaPredicted RBP16.25■□□□□ 0.19
RIPPLY3-202ENST00000485272 TNNT2P45379 298 aaPredicted RBP16.25■□□□□ 0.19
RIPPLY3-202ENST00000485272 KRT28Q7Z3Y7 464 aa16.25■□□□□ 0.19
RIPPLY3-202ENST00000485272 RALBP1Q15311 655 aa16.24■□□□□ 0.19
RIPPLY3-202ENST00000485272 ROBO1Q9Y6N7 1651 aa16.24■□□□□ 0.19
RIPPLY3-202ENST00000485272 CCDC184Q52MB2 194 aa16.24■□□□□ 0.19
RIPPLY3-202ENST00000485272 MORC1Q86VD1 984 aa16.24■□□□□ 0.19
RIPPLY3-202ENST00000485272 NUTM2GQ5VZR2 741 aa16.23■□□□□ 0.19
RIPPLY3-202ENST00000485272 MAP2P11137 1827 aaKnown RBP16.23■□□□□ 0.19
RIPPLY3-202ENST00000485272 MARF1Q9Y4F3 1742 aaKnown RBP16.23■□□□□ 0.19
RIPPLY3-202ENST00000485272 FBLN1P23142 703 aa16.23■□□□□ 0.19
RIPPLY3-202ENST00000485272 NPHP3Q7Z494 1330 aa16.23■□□□□ 0.19
RIPPLY3-202ENST00000485272 NSD2O96028 1365 aa16.22■□□□□ 0.19
RIPPLY3-202ENST00000485272 ABTB2Q8N961 1025 aa16.22■□□□□ 0.19
RIPPLY3-202ENST00000485272 TTC21AQ8NDW8 1320 aa16.22■□□□□ 0.19
RIPPLY3-202ENST00000485272 NHSL1Q5SYE7 1610 aa16.21■□□□□ 0.19
RIPPLY3-202ENST00000485272 PXDNQ92626 1479 aa16.21■□□□□ 0.19
RIPPLY3-202ENST00000485272 MYBBP1AQ9BQG0 1328 aaKnown RBP16.21■□□□□ 0.19
RIPPLY3-202ENST00000485272 UBAP1LF5GYI3 381 aa16.21■□□□□ 0.18
RIPPLY3-202ENST00000485272 TOM1O60784 492 aa16.21■□□□□ 0.18
RIPPLY3-202ENST00000485272 PIP4K2BP78356 416 aa16.21■□□□□ 0.18
RIPPLY3-202ENST00000485272 PPP2R1AP30153 589 aa16.2■□□□□ 0.18
RIPPLY3-202ENST00000485272 COG3Q96JB2 828 aa16.2■□□□□ 0.18
RIPPLY3-202ENST00000485272 ALS2Q96Q42 1657 aa16.19■□□□□ 0.18
RIPPLY3-202ENST00000485272 NLRP6P59044 892 aa16.19■□□□□ 0.18
RIPPLY3-202ENST00000485272 LMOD2Q6P5Q4 547 aa16.19■□□□□ 0.18
RIPPLY3-202ENST00000485272 UBE2Q2Q8WVN8 375 aa16.19■□□□□ 0.18
RIPPLY3-202ENST00000485272 IQSEC2Q5JU85 1478 aa16.19■□□□□ 0.18
RIPPLY3-202ENST00000485272 OVOS2A0A0J9YW53 1432 aa16.19■□□□□ 0.18
RIPPLY3-202ENST00000485272 OVOS2Q6IE36 1432 aa16.19■□□□□ 0.18
RIPPLY3-202ENST00000485272 BRD4O60885 1362 aaPredicted RBP16.18■□□□□ 0.18
RIPPLY3-202ENST00000485272 PLEKHG5O94827 1062 aa16.18■□□□□ 0.18
RIPPLY3-202ENST00000485272 HNRNPUQ00839 825 aaKnown RBP eCLIP16.18■□□□□ 0.18
RIPPLY3-202ENST00000485272 SALL2Q9Y467 1007 aaPredicted RBP16.18■□□□□ 0.18
RIPPLY3-202ENST00000485272 SOS2Q07890 1332 aaPredicted RBP16.17■□□□□ 0.18
RIPPLY3-202ENST00000485272 SOX12O15370 315 aa16.17■□□□□ 0.18
RIPPLY3-202ENST00000485272 USP31Q70CQ4 1352 aa16.17■□□□□ 0.18
RIPPLY3-202ENST00000485272 USP54Q70EL1 1684 aa16.16■□□□□ 0.18
RIPPLY3-202ENST00000485272 NLRP13Q86W25 1043 aa16.16■□□□□ 0.18
RIPPLY3-202ENST00000485272 MRS2Q9HD23 443 aa16.15■□□□□ 0.18
RIPPLY3-202ENST00000485272 SBNO1A3KN83 1393 aa16.15■□□□□ 0.18
RIPPLY3-202ENST00000485272 SPATA31A3Q5VYP0 1347 aa16.15■□□□□ 0.18
RIPPLY3-202ENST00000485272 MTHFSP49914 203 aa16.14■□□□□ 0.17
RIPPLY3-202ENST00000485272 PHLPP1O60346 1717 aa16.13■□□□□ 0.17
RIPPLY3-202ENST00000485272 TNS3Q68CZ2 1445 aa16.13■□□□□ 0.17
RIPPLY3-202ENST00000485272 RRS1Q15050 365 aaKnown RBP16.13■□□□□ 0.17
RIPPLY3-202ENST00000485272 ZBED9Q6R2W3 1325 aa16.13■□□□□ 0.17
RIPPLY3-202ENST00000485272 POLKQ9UBT6 870 aa16.12■□□□□ 0.17
RIPPLY3-202ENST00000485272 AHDC1Q5TGY3 1603 aaPredicted RBP16.12■□□□□ 0.17
RIPPLY3-202ENST00000485272 EMILIN1Q9Y6C2 1016 aa16.12■□□□□ 0.17
RIPPLY3-202ENST00000485272 CABLES1Q8TDN4 633 aa16.11■□□□□ 0.17
RIPPLY3-202ENST00000485272 MED1Q15648 1581 aaPredicted RBP16.11■□□□□ 0.17
RIPPLY3-202ENST00000485272 PPM1GO15355 546 aaPredicted RBP16.11■□□□□ 0.17
RIPPLY3-202ENST00000485272 LTN1O94822 1766 aa16.11■□□□□ 0.17
RIPPLY3-202ENST00000485272 CRYBG1Q9Y4K1 1723 aa16.1■□□□□ 0.17
RIPPLY3-202ENST00000485272 AATKQ6ZMQ8 1374 aa16.1■□□□□ 0.17
RIPPLY3-202ENST00000485272 COL16A1Q07092 1604 aaPredicted RBP16.09■□□□□ 0.17
RIPPLY3-202ENST00000485272 PEAK1Q9H792 1746 aa16.09■□□□□ 0.17
RIPPLY3-202ENST00000485272 GCP02774 474 aa16.09■□□□□ 0.17
RIPPLY3-202ENST00000485272 USP19O94966 1318 aa16.09■□□□□ 0.17
RIPPLY3-202ENST00000485272 PHRF1Q9P1Y6 1649 aaKnown RBP16.08■□□□□ 0.16
RIPPLY3-202ENST00000485272 ARHGEF10O15013 1369 aa16.08■□□□□ 0.16
RIPPLY3-202ENST00000485272 SLIT3O75094 1523 aa16.08■□□□□ 0.16
RIPPLY3-202ENST00000485272 NFAT5O94916 1531 aa16.08■□□□□ 0.16
RIPPLY3-202ENST00000485272 LRRC59Q96AG4 307 aaKnown RBP16.07■□□□□ 0.16
RIPPLY3-202ENST00000485272 MAP3K19Q56UN5 1328 aa16.07■□□□□ 0.16
RIPPLY3-202ENST00000485272 FAM9BQ8IZU0 186 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms