RNA–Protein interactions for RNA: ENST00000484620.1

PDLIM4-207, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-207ENST00000484620 NSD3Q9BZ95 1437 aa26.14■■□□□ 1.78
PDLIM4-207ENST00000484620 TRPM3Q9HCF6 1732 aaPredicted RBP26.14■■□□□ 1.78
PDLIM4-207ENST00000484620 SBNO1A3KN83 1393 aa26.13■■□□□ 1.77
PDLIM4-207ENST00000484620 CARD14Q9BXL6 1004 aa26.13■■□□□ 1.77
PDLIM4-207ENST00000484620 SSH2Q76I76 1423 aa26.13■■□□□ 1.77
PDLIM4-207ENST00000484620 TTC21AQ8NDW8 1320 aa26.13■■□□□ 1.77
PDLIM4-207ENST00000484620 PAK3O75914 559 aaPredicted RBP26.12■■□□□ 1.77
PDLIM4-207ENST00000484620 KNSTRNQ9Y448 316 aa26.12■■□□□ 1.77
PDLIM4-207ENST00000484620 TTC21BQ7Z4L5 1316 aa26.12■■□□□ 1.77
PDLIM4-207ENST00000484620 TNS3Q68CZ2 1445 aa26.09■■□□□ 1.77
PDLIM4-207ENST00000484620 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.09■■□□□ 1.77
PDLIM4-207ENST00000484620 COL16A1Q07092 1604 aaPredicted RBP26.09■■□□□ 1.77
PDLIM4-207ENST00000484620 CGNL1Q0VF96 1302 aa26.09■■□□□ 1.77
PDLIM4-207ENST00000484620 KIF20BQ96Q89 1820 aa26.07■■□□□ 1.76
PDLIM4-207ENST00000484620 LRRC59Q96AG4 307 aaKnown RBP26.07■■□□□ 1.76
PDLIM4-207ENST00000484620 SPATA31A3Q5VYP0 1347 aa26.07■■□□□ 1.76
PDLIM4-207ENST00000484620 ALS2Q96Q42 1657 aa26.06■■□□□ 1.76
PDLIM4-207ENST00000484620 PER1O15534 1290 aaPredicted RBP26.06■■□□□ 1.76
PDLIM4-207ENST00000484620 ARHGEF10O15013 1369 aa26.06■■□□□ 1.76
PDLIM4-207ENST00000484620 LMOD2Q6P5Q4 547 aa26.05■■□□□ 1.76
PDLIM4-207ENST00000484620 ABTB2Q8N961 1025 aa26.05■■□□□ 1.76
PDLIM4-207ENST00000484620 PIK3C2AO00443 1686 aa26.04■■□□□ 1.76
PDLIM4-207ENST00000484620 NSD2O96028 1365 aa26.03■■□□□ 1.76
PDLIM4-207ENST00000484620 NME9Q86XW9 330 aa26.02■■□□□ 1.76
PDLIM4-207ENST00000484620 HSPA1LP34931 641 aa26.01■■□□□ 1.75
PDLIM4-207ENST00000484620 FYB1O15117 783 aa26■■□□□ 1.75
PDLIM4-207ENST00000484620 USP31Q70CQ4 1352 aa25.99■■□□□ 1.75
PDLIM4-207ENST00000484620 NPC1L1Q9UHC9 1359 aa25.99■■□□□ 1.75
PDLIM4-207ENST00000484620 NLRP6P59044 892 aa25.99■■□□□ 1.75
PDLIM4-207ENST00000484620 AMER1Q5JTC6 1135 aaPredicted RBP25.99■■□□□ 1.75
PDLIM4-207ENST00000484620 NLRP13Q86W25 1043 aa25.99■■□□□ 1.75
PDLIM4-207ENST00000484620 ANKRD26Q9UPS8 1709 aa25.99■■□□□ 1.75
PDLIM4-207ENST00000484620 USP54Q70EL1 1684 aa25.99■■□□□ 1.75
PDLIM4-207ENST00000484620 COG3Q96JB2 828 aa25.98■■□□□ 1.75
PDLIM4-207ENST00000484620 NUTM2GQ5VZR2 741 aa25.97■■□□□ 1.75
PDLIM4-207ENST00000484620 GGNBP2Q9H3C7 697 aa25.97■■□□□ 1.75
PDLIM4-207ENST00000484620 SHPRHQ149N8 1683 aa25.96■■□□□ 1.75
PDLIM4-207ENST00000484620 OVOS2A0A0J9YW53 1432 aa25.96■■□□□ 1.75
PDLIM4-207ENST00000484620 OVOS2Q6IE36 1432 aa25.96■■□□□ 1.75
PDLIM4-207ENST00000484620 PNPLA6Q8IY17 1366 aa25.95■■□□□ 1.75
PDLIM4-207ENST00000484620 JCADQ9P266 1359 aa25.95■■□□□ 1.75
PDLIM4-207ENST00000484620 MED1Q15648 1581 aaPredicted RBP25.95■■□□□ 1.75
PDLIM4-207ENST00000484620 COL22A1Q8NFW1 1626 aaPredicted RBP25.95■■□□□ 1.74
PDLIM4-207ENST00000484620 CC2D1BQ5T0F9 858 aaKnown RBP25.94■■□□□ 1.74
PDLIM4-207ENST00000484620 MARF1Q9Y4F3 1742 aaKnown RBP25.94■■□□□ 1.74
PDLIM4-207ENST00000484620 ZRANB1Q9UGI0 708 aa25.93■■□□□ 1.74
PDLIM4-207ENST00000484620 USP19O94966 1318 aa25.91■■□□□ 1.74
PDLIM4-207ENST00000484620 MORC1Q86VD1 984 aa25.91■■□□□ 1.74
PDLIM4-207ENST00000484620 SLIT3O75094 1523 aa25.9■■□□□ 1.74
PDLIM4-207ENST00000484620 PHRF1Q9P1Y6 1649 aaKnown RBP25.9■■□□□ 1.74
PDLIM4-207ENST00000484620 CNGB1Q14028 1251 aaPredicted RBP25.9■■□□□ 1.74
PDLIM4-207ENST00000484620 CRYBG1Q9Y4K1 1723 aa25.9■■□□□ 1.74
PDLIM4-207ENST00000484620 PLEKHG5O94827 1062 aa25.89■■□□□ 1.74
PDLIM4-207ENST00000484620 ABCA3Q99758 1704 aa25.88■■□□□ 1.73
PDLIM4-207ENST00000484620 HAP1P54257 671 aaPredicted RBP25.88■■□□□ 1.73
PDLIM4-207ENST00000484620 KCNH5Q8NCM2 988 aa25.88■■□□□ 1.73
PDLIM4-207ENST00000484620 CABLES1Q8TDN4 633 aa25.86■■□□□ 1.73
PDLIM4-207ENST00000484620 DIEXFQ68CQ4 756 aaKnown RBP25.85■■□□□ 1.73
PDLIM4-207ENST00000484620 SPATA31A6Q5VVP1 1343 aa25.85■■□□□ 1.73
PDLIM4-207ENST00000484620 GCP02774 474 aa25.84■■□□□ 1.73
PDLIM4-207ENST00000484620 SOX12O15370 315 aa25.83■■□□□ 1.73
PDLIM4-207ENST00000484620 RALBP1Q15311 655 aa25.83■■□□□ 1.73
PDLIM4-207ENST00000484620 PARD3Q8TEW0 1356 aa25.82■■□□□ 1.72
PDLIM4-207ENST00000484620 ANP32CO43423 234 aa25.82■■□□□ 1.72
PDLIM4-207ENST00000484620 NFAT5O94916 1531 aa25.82■■□□□ 1.72
PDLIM4-207ENST00000484620 TNNT2P45379 298 aaPredicted RBP25.81■■□□□ 1.72
PDLIM4-207ENST00000484620 AATKQ6ZMQ8 1374 aa25.81■■□□□ 1.72
PDLIM4-207ENST00000484620 PRKRIP1Q9H875 184 aaPredicted RBP25.79■■□□□ 1.72
PDLIM4-207ENST00000484620 NUTM2BA6NNL0 878 aaPredicted RBP25.78■■□□□ 1.72
PDLIM4-207ENST00000484620 NUTM2EB1AL46 878 aaPredicted RBP25.78■■□□□ 1.72
PDLIM4-207ENST00000484620 NUTM2AQ8IVF1 878 aaPredicted RBP25.78■■□□□ 1.72
PDLIM4-207ENST00000484620 LTN1O94822 1766 aa25.77■■□□□ 1.72
PDLIM4-207ENST00000484620 MAP2P11137 1827 aaKnown RBP25.77■■□□□ 1.72
PDLIM4-207ENST00000484620 CPDO75976 1380 aa25.76■■□□□ 1.71
PDLIM4-207ENST00000484620 ZC3H6P61129 1189 aaKnown RBP25.75■■□□□ 1.71
PDLIM4-207ENST00000484620 KIAA0232Q92628 1395 aa25.74■■□□□ 1.71
PDLIM4-207ENST00000484620 MYBBP1AQ9BQG0 1328 aaKnown RBP25.73■■□□□ 1.71
PDLIM4-207ENST00000484620 ZBTB7CA1YPR0 619 aa25.73■■□□□ 1.71
PDLIM4-207ENST00000484620 FBLN1P23142 703 aa25.73■■□□□ 1.71
PDLIM4-207ENST00000484620 RRS1Q15050 365 aaKnown RBP25.73■■□□□ 1.71
PDLIM4-207ENST00000484620 ARHGEF25Q86VW2 580 aa25.73■■□□□ 1.71
PDLIM4-207ENST00000484620 PRDM11Q9NQV5 511 aa25.73■■□□□ 1.71
PDLIM4-207ENST00000484620 MAP3K19Q56UN5 1328 aa25.72■■□□□ 1.71
PDLIM4-207ENST00000484620 ADAMTS2O95450 1211 aa25.72■■□□□ 1.71
PDLIM4-207ENST00000484620 PPP2R1AP30153 589 aa25.72■■□□□ 1.71
PDLIM4-207ENST00000484620 KIF24Q5T7B8 1368 aa25.71■■□□□ 1.71
PDLIM4-207ENST00000484620 POLKQ9UBT6 870 aa25.71■■□□□ 1.71
PDLIM4-207ENST00000484620 SMG6Q86US8 1419 aaKnown RBP25.71■■□□□ 1.71
PDLIM4-207ENST00000484620 RTL1A6NKG5 1358 aa25.7■■□□□ 1.71
PDLIM4-207ENST00000484620 LRP6O75581 1613 aa25.7■■□□□ 1.71
PDLIM4-207ENST00000484620 ABCC6O95255 1503 aa25.7■■□□□ 1.7
PDLIM4-207ENST00000484620 AMPHP49418 695 aa25.7■■□□□ 1.7
PDLIM4-207ENST00000484620 COL14A1Q05707 1796 aaKnown RBP25.69■■□□□ 1.7
PDLIM4-207ENST00000484620 PPM1GO15355 546 aaPredicted RBP25.69■■□□□ 1.7
PDLIM4-207ENST00000484620 EMILIN1Q9Y6C2 1016 aa25.69■■□□□ 1.7
PDLIM4-207ENST00000484620 MEX3CQ5U5Q3 659 aaKnown RBP25.68■■□□□ 1.7
PDLIM4-207ENST00000484620 FLT4P35916 1363 aa25.68■■□□□ 1.7
PDLIM4-207ENST00000484620 MTHFSP49914 203 aa25.67■■□□□ 1.7
PDLIM4-207ENST00000484620 CDK12Q9NYV4 1490 aaPredicted RBP25.66■■□□□ 1.7
PDLIM4-207ENST00000484620 PEAK1Q9H792 1746 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms