RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 NGLY1Q96IV0 654 aa37.48■■■■□ 3.59
SMDT1-203ENST00000484235 ARHGEF10O15013 1369 aa37.47■■■■□ 3.59
SMDT1-203ENST00000484235 PUS7Q96PZ0 661 aaKnown RBP37.47■■■■□ 3.59
SMDT1-203ENST00000484235 COL22A1Q8NFW1 1626 aaPredicted RBP37.46■■■■□ 3.59
SMDT1-203ENST00000484235 PAK3O75914 559 aaPredicted RBP37.45■■■■□ 3.59
SMDT1-203ENST00000484235 FNBP4Q8N3X1 1017 aaPredicted RBP37.41■■■■□ 3.58
SMDT1-203ENST00000484235 TRPM3Q9HCF6 1732 aaPredicted RBP37.39■■■■□ 3.58
SMDT1-203ENST00000484235 ZNF692Q9BU19 519 aaPredicted RBP37.38■■■■□ 3.57
SMDT1-203ENST00000484235 TMF1P82094 1093 aa37.37■■■■□ 3.57
SMDT1-203ENST00000484235 USP21Q9UK80 565 aa37.37■■■■□ 3.57
SMDT1-203ENST00000484235 BRD4O60885 1362 aaPredicted RBP37.36■■■■□ 3.57
SMDT1-203ENST00000484235 CABLES1Q8TDN4 633 aa37.34■■■■□ 3.57
SMDT1-203ENST00000484235 EIF4G2P78344 907 aaKnown RBP eCLIP37.33■■■■□ 3.57
SMDT1-203ENST00000484235 HAP1P54257 671 aaPredicted RBP37.32■■■■□ 3.56
SMDT1-203ENST00000484235 TMC1Q8TDI8 760 aa37.32■■■■□ 3.56
SMDT1-203ENST00000484235 PLEKHG5O94827 1062 aa37.31■■■■□ 3.56
SMDT1-203ENST00000484235 TRPC5Q9UL62 973 aaPredicted RBP37.31■■■■□ 3.56
SMDT1-203ENST00000484235 ALS2Q96Q42 1657 aa37.31■■■■□ 3.56
SMDT1-203ENST00000484235 USP6P35125 1406 aa37.3■■■■□ 3.56
SMDT1-203ENST00000484235 CDCA8Q53HL2 280 aa37.29■■■■□ 3.56
SMDT1-203ENST00000484235 ABTB2Q8N961 1025 aa37.29■■■■□ 3.56
SMDT1-203ENST00000484235 SLC12A5Q9H2X9 1139 aa37.29■■■■□ 3.56
SMDT1-203ENST00000484235 ATRNO75882 1429 aa37.28■■■■□ 3.56
SMDT1-203ENST00000484235 CPSF1Q10570 1443 aaKnown RBP37.27■■■■□ 3.56
SMDT1-203ENST00000484235 BCL9LQ86UU0 1499 aa37.25■■■■□ 3.55
SMDT1-203ENST00000484235 HSPA5P11021 654 aaKnown RBP37.24■■■■□ 3.55
SMDT1-203ENST00000484235 SSH2Q76I76 1423 aa37.24■■■■□ 3.55
SMDT1-203ENST00000484235 NUTM2GQ5VZR2 741 aa37.23■■■■□ 3.55
SMDT1-203ENST00000484235 KTN1Q86UP2 1357 aaKnown RBP37.23■■■■□ 3.55
SMDT1-203ENST00000484235 TERF2IPQ9NYB0 399 aa37.23■■■■□ 3.55
SMDT1-203ENST00000484235 NINLQ9Y2I6 1382 aa37.23■■■■□ 3.55
SMDT1-203ENST00000484235 HDGFL2Q7Z4V5 671 aaPredicted RBP37.22■■■■□ 3.55
SMDT1-203ENST00000484235 NLRP13Q86W25 1043 aa37.2■■■■□ 3.55
SMDT1-203ENST00000484235 TTC21BQ7Z4L5 1316 aa37.19■■■■□ 3.54
SMDT1-203ENST00000484235 CD163L1Q9NR16 1453 aa37.18■■■■□ 3.54
SMDT1-203ENST00000484235 TTC21AQ8NDW8 1320 aa37.16■■■■□ 3.54
SMDT1-203ENST00000484235 NLRP6P59044 892 aa37.15■■■■□ 3.54
SMDT1-203ENST00000484235 AKAP12Q02952 1782 aa37.14■■■■□ 3.54
SMDT1-203ENST00000484235 FAM83GA6ND36 823 aa37.12■■■■□ 3.53
SMDT1-203ENST00000484235 MARF1Q9Y4F3 1742 aaKnown RBP37.12■■■■□ 3.53
SMDT1-203ENST00000484235 USP19O94966 1318 aa37.11■■■■□ 3.53
SMDT1-203ENST00000484235 ABCA3Q99758 1704 aa37.11■■■■□ 3.53
SMDT1-203ENST00000484235 A0A1W2PP64 1363 aa37.11■■■■□ 3.53
SMDT1-203ENST00000484235 GJD4Q96KN9 370 aaPredicted RBP37.1■■■■□ 3.53
SMDT1-203ENST00000484235 SUGP2Q8IX01 1082 aaKnown RBP eCLIP37.09■■■■□ 3.53
SMDT1-203ENST00000484235 GCP02774 474 aa37.07■■■■□ 3.52
SMDT1-203ENST00000484235 EDC4Q6P2E9 1401 aaKnown RBP37.07■■■■□ 3.52
SMDT1-203ENST00000484235 SLIT2O94813 1529 aa37.06■■■■□ 3.52
SMDT1-203ENST00000484235 UNC5CLQ8IV45 518 aa37.06■■■■□ 3.52
SMDT1-203ENST00000484235 CRYBG1Q9Y4K1 1723 aa37.06■■■■□ 3.52
SMDT1-203ENST00000484235 PRDM11Q9NQV5 511 aa37.05■■■■□ 3.52
SMDT1-203ENST00000484235 MON2Q7Z3U7 1717 aa37.05■■■■□ 3.52
SMDT1-203ENST00000484235 ANKRD36BQ8N2N9 1353 aa37.04■■■■□ 3.52
SMDT1-203ENST00000484235 ZC3H6P61129 1189 aaKnown RBP37.04■■■■□ 3.52
SMDT1-203ENST00000484235 KIAA0232Q92628 1395 aa37.03■■■■□ 3.52
SMDT1-203ENST00000484235 NRKQ7Z2Y5 1582 aa37.02■■■■□ 3.52
SMDT1-203ENST00000484235 EP400Q96L91 3159 aa37.02■■■■□ 3.52
SMDT1-203ENST00000484235 PIK3C2AO00443 1686 aa37.01■■■■□ 3.52
SMDT1-203ENST00000484235 PHRF1Q9P1Y6 1649 aaKnown RBP36.99■■■■□ 3.51
SMDT1-203ENST00000484235 NME9Q86XW9 330 aa36.99■■■■□ 3.51
SMDT1-203ENST00000484235 BTG4Q9NY30 223 aa36.99■■■■□ 3.51
SMDT1-203ENST00000484235 TNKS1BP1Q9C0C2 1729 aaKnown RBP36.99■■■■□ 3.51
SMDT1-203ENST00000484235 POLR3GLQ9BT43 218 aa36.98■■■■□ 3.51
SMDT1-203ENST00000484235 CPDO75976 1380 aa36.98■■■■□ 3.51
SMDT1-203ENST00000484235 USP31Q70CQ4 1352 aa36.98■■■■□ 3.51
SMDT1-203ENST00000484235 KCNH5Q8NCM2 988 aa36.97■■■■□ 3.51
SMDT1-203ENST00000484235 SRCAPQ6ZRS2 3230 aa36.97■■■■□ 3.51
SMDT1-203ENST00000484235 CCDC125Q86Z20 511 aa36.96■■■■□ 3.51
SMDT1-203ENST00000484235 ZRANB1Q9UGI0 708 aa36.96■■■■□ 3.51
SMDT1-203ENST00000484235 GLI3P10071 1580 aa36.95■■■■□ 3.51
SMDT1-203ENST00000484235 CHRNA2Q15822 529 aa36.95■■■■□ 3.51
SMDT1-203ENST00000484235 SLIT3O75094 1523 aa36.95■■■■□ 3.5
SMDT1-203ENST00000484235 COL14A1Q05707 1796 aaKnown RBP36.94■■■■□ 3.5
SMDT1-203ENST00000484235 C11orf95C9JLR9 678 aaPredicted RBP36.94■■■■□ 3.5
SMDT1-203ENST00000484235 VPS72Q15906 364 aa36.92■■■■□ 3.5
SMDT1-203ENST00000484235 NWD2Q9ULI1 1742 aa36.9■■■■□ 3.5
SMDT1-203ENST00000484235 PLCH1Q4KWH8 1693 aa36.9■■■■□ 3.5
SMDT1-203ENST00000484235 CARD14Q9BXL6 1004 aa36.88■■■■□ 3.49
SMDT1-203ENST00000484235 SOX12O15370 315 aa36.86■■■■□ 3.49
SMDT1-203ENST00000484235 ARHGEF25Q86VW2 580 aa36.86■■■■□ 3.49
SMDT1-203ENST00000484235 ONECUT3O60422 494 aaPredicted RBP36.85■■■■□ 3.49
SMDT1-203ENST00000484235 MYOM1P52179 1685 aa36.85■■■■□ 3.49
SMDT1-203ENST00000484235 FYB1O15117 783 aa36.84■■■■□ 3.49
SMDT1-203ENST00000484235 COG3Q96JB2 828 aa36.84■■■■□ 3.49
SMDT1-203ENST00000484235 CCDC9Q9Y3X0 531 aaKnown RBP36.84■■■■□ 3.49
SMDT1-203ENST00000484235 AATKQ6ZMQ8 1374 aa36.83■■■■□ 3.49
SMDT1-203ENST00000484235 ZBTB7CA1YPR0 619 aa36.83■■■■□ 3.49
SMDT1-203ENST00000484235 EVA1CP58658 441 aa36.82■■■■□ 3.48
SMDT1-203ENST00000484235 OVOS2A0A0J9YW53 1432 aa36.81■■■■□ 3.48
SMDT1-203ENST00000484235 OVOS2Q6IE36 1432 aa36.81■■■■□ 3.48
SMDT1-203ENST00000484235 KIF7Q2M1P5 1343 aa36.81■■■■□ 3.48
SMDT1-203ENST00000484235 USP54Q70EL1 1684 aa36.8■■■■□ 3.48
SMDT1-203ENST00000484235 SEPT12Q8IYM1 358 aa36.8■■■■□ 3.48
SMDT1-203ENST00000484235 STRN4Q9NRL3 753 aa36.79■■■■□ 3.48
SMDT1-203ENST00000484235 CAMTA1Q9Y6Y1 1673 aa36.78■■■■□ 3.48
SMDT1-203ENST00000484235 PANK3Q9H999 370 aa36.78■■■■□ 3.48
SMDT1-203ENST00000484235 NFAT5O94916 1531 aa36.78■■■■□ 3.48
SMDT1-203ENST00000484235 BLMP54132 1417 aaPredicted RBP36.77■■■■□ 3.48
SMDT1-203ENST00000484235 NSD3Q9BZ95 1437 aa36.77■■■■□ 3.48
SMDT1-203ENST00000484235 NRAPQ86VF7 1730 aa36.77■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms