RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 PXDNQ92626 1479 aa9.83□□□□□ -0.84
BRCA1-216ENST00000484087 DIEXFQ68CQ4 756 aaKnown RBP9.82□□□□□ -0.84
BRCA1-216ENST00000484087 PRR36Q9H6K5 1346 aa9.82□□□□□ -0.84
BRCA1-216ENST00000484087 FOXO3O43524 673 aa9.81□□□□□ -0.84
BRCA1-216ENST00000484087 NBPF8Q3BBV2 869 aa9.81□□□□□ -0.84
BRCA1-216ENST00000484087 PNPLA6Q8IY17 1366 aa9.81□□□□□ -0.84
BRCA1-216ENST00000484087 TOPAZ1Q8N9V7 1692 aa9.81□□□□□ -0.84
BRCA1-216ENST00000484087 ABCA3Q99758 1704 aa9.81□□□□□ -0.84
BRCA1-216ENST00000484087 PMFBP1Q8TBY8 1022 aa9.8□□□□□ -0.84
BRCA1-216ENST00000484087 TULP4Q9NRJ4 1543 aa9.8□□□□□ -0.84
BRCA1-216ENST00000484087 ATP7BP35670 1465 aa9.8□□□□□ -0.84
BRCA1-216ENST00000484087 ITSN1Q15811 1721 aa9.79□□□□□ -0.84
BRCA1-216ENST00000484087 TRPM3Q9HCF6 1732 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-216ENST00000484087 COL22A1Q8NFW1 1626 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-216ENST00000484087 SOS2Q07890 1332 aaPredicted RBP9.79□□□□□ -0.84
BRCA1-216ENST00000484087 MARF1Q9Y4F3 1742 aaKnown RBP9.78□□□□□ -0.84
BRCA1-216ENST00000484087 MEX3CQ5U5Q3 659 aaKnown RBP9.78□□□□□ -0.84
BRCA1-216ENST00000484087 POTEAQ6S8J7 498 aa9.78□□□□□ -0.84
BRCA1-216ENST00000484087 ROCK2O75116 1388 aaKnown RBP9.77□□□□□ -0.85
BRCA1-216ENST00000484087 ADAMTS2O95450 1211 aa9.77□□□□□ -0.85
BRCA1-216ENST00000484087 SIRT1Q96EB6 747 aa9.77□□□□□ -0.85
BRCA1-216ENST00000484087 SPATA31A6Q5VVP1 1343 aa9.77□□□□□ -0.85
BRCA1-216ENST00000484087 WASLO00401 505 aaPredicted RBP9.76□□□□□ -0.85
BRCA1-216ENST00000484087 LRRC59Q96AG4 307 aaKnown RBP9.76□□□□□ -0.85
BRCA1-216ENST00000484087 PHF8Q9UPP1 1060 aa9.76□□□□□ -0.85
BRCA1-216ENST00000484087 ALS2Q96Q42 1657 aa9.76□□□□□ -0.85
BRCA1-216ENST00000484087 NPHP3Q7Z494 1330 aa9.76□□□□□ -0.85
BRCA1-216ENST00000484087 CRYBG1Q9Y4K1 1723 aa9.76□□□□□ -0.85
BRCA1-216ENST00000484087 ANKARQ7Z5J8 1434 aa9.75□□□□□ -0.85
BRCA1-216ENST00000484087 C8orf37Q96NL8 207 aa9.75□□□□□ -0.85
BRCA1-216ENST00000484087 RALGAPBQ86X10 1494 aa9.74□□□□□ -0.85
BRCA1-216ENST00000484087 KRT28Q7Z3Y7 464 aa9.74□□□□□ -0.85
BRCA1-216ENST00000484087 CABLES1Q8TDN4 633 aa9.74□□□□□ -0.85
BRCA1-216ENST00000484087 STAC3Q96MF2 364 aa9.74□□□□□ -0.85
BRCA1-216ENST00000484087 CDK19Q9BWU1 502 aa9.74□□□□□ -0.85
BRCA1-216ENST00000484087 CABP2Q9NPB3 220 aa9.74□□□□□ -0.85
BRCA1-216ENST00000484087 CENPJQ9HC77 1338 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-216ENST00000484087 PLCH1Q4KWH8 1693 aa9.74□□□□□ -0.85
BRCA1-216ENST00000484087 TNS3Q68CZ2 1445 aa9.74□□□□□ -0.85
BRCA1-216ENST00000484087 LMOD2Q6P5Q4 547 aa9.73□□□□□ -0.85
BRCA1-216ENST00000484087 AFF2P51816 1311 aa9.73□□□□□ -0.85
BRCA1-216ENST00000484087 PHRF1Q9P1Y6 1649 aaKnown RBP9.73□□□□□ -0.85
BRCA1-216ENST00000484087 CHADLQ6NUI6 762 aa9.72□□□□□ -0.85
BRCA1-216ENST00000484087 NUDT16Q96DE0 195 aaKnown RBP9.72□□□□□ -0.85
BRCA1-216ENST00000484087 SPATA31A3Q5VYP0 1347 aa9.72□□□□□ -0.85
BRCA1-216ENST00000484087 SRPK2P78362 688 aaKnown RBP9.72□□□□□ -0.85
BRCA1-216ENST00000484087 NUTM2GQ5VZR2 741 aa9.71□□□□□ -0.86
BRCA1-216ENST00000484087 CARD11Q9BXL7 1154 aa9.71□□□□□ -0.86
BRCA1-216ENST00000484087 GPRASP1Q5JY77 1395 aa9.71□□□□□ -0.86
BRCA1-216ENST00000484087 PPIP5K1Q6PFW1 1433 aa9.71□□□□□ -0.86
BRCA1-216ENST00000484087 AKAP12Q02952 1782 aa9.7□□□□□ -0.86
BRCA1-216ENST00000484087 PSME1Q06323 249 aa9.7□□□□□ -0.86
BRCA1-216ENST00000484087 NGDNQ8NEJ9 315 aaKnown RBP9.7□□□□□ -0.86
BRCA1-216ENST00000484087 EIF3AQ14152 1382 aaKnown RBP9.69□□□□□ -0.86
BRCA1-216ENST00000484087 SOCS7O14512 581 aa9.69□□□□□ -0.86
BRCA1-216ENST00000484087 PAK3O75914 559 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-216ENST00000484087 PRR29P0C7W0 189 aa9.69□□□□□ -0.86
BRCA1-216ENST00000484087 POTEIP0CG38 1075 aa9.69□□□□□ -0.86
BRCA1-216ENST00000484087 PIK3C2AO00443 1686 aa9.69□□□□□ -0.86
BRCA1-216ENST00000484087 NRKQ7Z2Y5 1582 aa9.68□□□□□ -0.86
BRCA1-216ENST00000484087 ACEP12821 1306 aa9.68□□□□□ -0.86
BRCA1-216ENST00000484087 NGLY1Q96IV0 654 aa9.68□□□□□ -0.86
BRCA1-216ENST00000484087 NRAPQ86VF7 1730 aa9.68□□□□□ -0.86
BRCA1-216ENST00000484087 EP400Q96L91 3159 aa9.68□□□□□ -0.86
BRCA1-216ENST00000484087 RGS12O14924 1447 aa9.68□□□□□ -0.86
BRCA1-216ENST00000484087 SBNO1A3KN83 1393 aa9.67□□□□□ -0.86
BRCA1-216ENST00000484087 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.67□□□□□ -0.86
BRCA1-216ENST00000484087 MON2Q7Z3U7 1717 aa9.67□□□□□ -0.86
BRCA1-216ENST00000484087 HAP1P54257 671 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-216ENST00000484087 GLI3P10071 1580 aa9.66□□□□□ -0.86
BRCA1-216ENST00000484087 BCL9LQ86UU0 1499 aa9.66□□□□□ -0.86
BRCA1-216ENST00000484087 POLR3AO14802 1390 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-216ENST00000484087 ZNF772Q68DY9 489 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-216ENST00000484087 CABP1Q9NZU7 370 aa9.66□□□□□ -0.86
BRCA1-216ENST00000484087 USP21Q9UK80 565 aa9.66□□□□□ -0.86
BRCA1-216ENST00000484087 CCDC61Q9Y6R9 512 aa9.66□□□□□ -0.86
BRCA1-216ENST00000484087 ARHGEF10O15013 1369 aa9.65□□□□□ -0.86
BRCA1-216ENST00000484087 SLIT2O94813 1529 aa9.65□□□□□ -0.86
BRCA1-216ENST00000484087 NWD2Q9ULI1 1742 aa9.65□□□□□ -0.87
BRCA1-216ENST00000484087 BRWD3Q6RI45 1802 aa9.64□□□□□ -0.87
BRCA1-216ENST00000484087 EVC2Q86UK5 1308 aa9.64□□□□□ -0.87
BRCA1-216ENST00000484087 CD163L1Q9NR16 1453 aa9.64□□□□□ -0.87
BRCA1-216ENST00000484087 ST20-MTHFSA0A0A6YYL1 179 aa9.64□□□□□ -0.87
BRCA1-216ENST00000484087 QTRT2Q9H974 415 aaKnown RBP9.64□□□□□ -0.87
BRCA1-216ENST00000484087 ATRNO75882 1429 aa9.64□□□□□ -0.87
BRCA1-216ENST00000484087 USP6P35125 1406 aa9.64□□□□□ -0.87
BRCA1-216ENST00000484087 COL14A1Q05707 1796 aaKnown RBP9.64□□□□□ -0.87
BRCA1-216ENST00000484087 USP47Q96K76 1375 aa9.63□□□□□ -0.87
BRCA1-216ENST00000484087 MYOM1P52179 1685 aa9.63□□□□□ -0.87
BRCA1-216ENST00000484087 PLEKHG3A1L390 1219 aa9.63□□□□□ -0.87
BRCA1-216ENST00000484087 EIF4G2P78344 907 aaKnown RBP eCLIP9.63□□□□□ -0.87
BRCA1-216ENST00000484087 CHRNA2Q15822 529 aa9.63□□□□□ -0.87
BRCA1-216ENST00000484087 RGPD5Q99666 1765 aa9.62□□□□□ -0.87
BRCA1-216ENST00000484087 RXRBP28702 533 aa9.62□□□□□ -0.87
BRCA1-216ENST00000484087 ZC3H6P61129 1189 aaKnown RBP9.62□□□□□ -0.87
BRCA1-216ENST00000484087 FNBP4Q8N3X1 1017 aaPredicted RBP9.62□□□□□ -0.87
BRCA1-216ENST00000484087 TESK2Q96S53 571 aa9.62□□□□□ -0.87
BRCA1-216ENST00000484087 ZBTB7CA1YPR0 619 aa9.61□□□□□ -0.87
BRCA1-216ENST00000484087 FAM83GA6ND36 823 aa9.61□□□□□ -0.87
BRCA1-216ENST00000484087 SOX12O15370 315 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms