RNA–Protein interactions for RNA: ENST00000483684.1

COMMD3-213, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 722 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-213ENST00000483684 NPAS3Q8IXF0 933 aa11.11□□□□□ -0.63
COMMD3-213ENST00000483684 RSBN1LQ6PCB5 846 aaPredicted RBP11.1□□□□□ -0.63
COMMD3-213ENST00000483684 LYPD8Q6UX82 237 aa11.1□□□□□ -0.63
COMMD3-213ENST00000483684 SLC16A10Q8TF71 515 aa11.1□□□□□ -0.63
COMMD3-213ENST00000483684 TBC1D2Q9BYX2 928 aa11.1□□□□□ -0.63
COMMD3-213ENST00000483684 PLEKHG3A1L390 1219 aa11.09□□□□□ -0.63
COMMD3-213ENST00000483684 NNTQ13423 1086 aa11.08□□□□□ -0.64
COMMD3-213ENST00000483684 ZFP42Q96MM3 310 aa11.08□□□□□ -0.64
COMMD3-213ENST00000483684 PCDHB15Q9Y5E8 787 aa11.08□□□□□ -0.64
COMMD3-213ENST00000483684 DIXDC1Q155Q3 683 aa11.07□□□□□ -0.64
COMMD3-213ENST00000483684 PARP9Q8IXQ6 854 aa11.07□□□□□ -0.64
COMMD3-213ENST00000483684 CFAP99D6REC4 459 aa11.06□□□□□ -0.64
COMMD3-213ENST00000483684 SPTLC1O15269 473 aa11.06□□□□□ -0.64
COMMD3-213ENST00000483684 F12P00748 615 aaPredicted RBP11.06□□□□□ -0.64
COMMD3-213ENST00000483684 LORP23490 312 aaPredicted RBP11.06□□□□□ -0.64
COMMD3-213ENST00000483684 KLF16Q9BXK1 252 aaPredicted RBP11.06□□□□□ -0.64
COMMD3-213ENST00000483684 TIMP2P16035 220 aa11.05□□□□□ -0.64
COMMD3-213ENST00000483684 GMPRP36959 345 aa11.05□□□□□ -0.64
COMMD3-213ENST00000483684 H3BM21 787 aa11.04□□□□□ -0.64
COMMD3-213ENST00000483684 HRCP23327 699 aa11.04□□□□□ -0.64
COMMD3-213ENST00000483684 IRF7Q92985 503 aa11.04□□□□□ -0.64
COMMD3-213ENST00000483684 CDK15Q96Q40 435 aa11.04□□□□□ -0.64
COMMD3-213ENST00000483684 TRIM66O15016 1216 aa11.03□□□□□ -0.64
COMMD3-213ENST00000483684 CTHP32929 405 aa11.03□□□□□ -0.64
COMMD3-213ENST00000483684 MRPL14Q6P1L8 145 aaKnown RBP11.03□□□□□ -0.64
COMMD3-213ENST00000483684 ADH1CP00326 375 aa11.02□□□□□ -0.65
COMMD3-213ENST00000483684 PRPF38BQ5VTL8 546 aaKnown RBP11.02□□□□□ -0.65
COMMD3-213ENST00000483684 FAM174AQ8TBP5 190 aa11.02□□□□□ -0.65
COMMD3-213ENST00000483684 ZBTB3Q9H5J0 574 aa11.02□□□□□ -0.65
COMMD3-213ENST00000483684 VEGFBP49765 207 aa11.01□□□□□ -0.65
COMMD3-213ENST00000483684 FOXJ1Q92949 421 aa11.01□□□□□ -0.65
COMMD3-213ENST00000483684 MAP10Q9P2G4 905 aa11.01□□□□□ -0.65
COMMD3-213ENST00000483684 WDR4P57081 412 aaKnown RBP11□□□□□ -0.65
COMMD3-213ENST00000483684 RIC3Q7Z5B4 369 aa11□□□□□ -0.65
COMMD3-213ENST00000483684 ERBB4Q15303 1308 aa11□□□□□ -0.65
COMMD3-213ENST00000483684 C4orf48Q5BLP8 95 aa10.98□□□□□ -0.65
COMMD3-213ENST00000483684 PURBQ96QR8 312 aaKnown RBP10.98□□□□□ -0.65
COMMD3-213ENST00000483684 SCARF1Q14162 830 aa10.97□□□□□ -0.65
COMMD3-213ENST00000483684 ZSCAN1Q8NBB4 408 aa10.97□□□□□ -0.65
COMMD3-213ENST00000483684 CABLES1Q8TDN4 633 aa10.97□□□□□ -0.65
COMMD3-213ENST00000483684 PER1O15534 1290 aaPredicted RBP10.96□□□□□ -0.65
COMMD3-213ENST00000483684 AK7Q96M32 723 aa10.96□□□□□ -0.65
COMMD3-213ENST00000483684 FAM181BA6NEQ2 426 aa10.95□□□□□ -0.66
COMMD3-213ENST00000483684 GRM5P41594 1212 aa10.95□□□□□ -0.66
COMMD3-213ENST00000483684 NR5A1Q13285 461 aa10.95□□□□□ -0.66
COMMD3-213ENST00000483684 TUSC1Q2TAM9 212 aa10.95□□□□□ -0.66
COMMD3-213ENST00000483684 NR3C2P08235 984 aa10.94□□□□□ -0.66
COMMD3-213ENST00000483684 SOBPA7XYQ1 873 aa10.93□□□□□ -0.66
COMMD3-213ENST00000483684 ZIC2O95409 532 aaPredicted RBP10.93□□□□□ -0.66
COMMD3-213ENST00000483684 ITPKCQ96DU7 683 aa10.93□□□□□ -0.66
COMMD3-213ENST00000483684 ZFAND3Q9H8U3 227 aa10.93□□□□□ -0.66
COMMD3-213ENST00000483684 LIMD1Q9UGP4 676 aa10.93□□□□□ -0.66
COMMD3-213ENST00000483684 VSIG8P0DPA2 414 aa10.92□□□□□ -0.66
COMMD3-213ENST00000483684 ARID5BQ14865 1188 aa10.92□□□□□ -0.66
COMMD3-213ENST00000483684 MYSM1Q5VVJ2 828 aa10.92□□□□□ -0.66
COMMD3-213ENST00000483684 SH3RF1Q7Z6J0 888 aa10.92□□□□□ -0.66
COMMD3-213ENST00000483684 BPHLQ86WA6 291 aaPredicted RBP10.92□□□□□ -0.66
COMMD3-213ENST00000483684 LILRB3O75022 631 aa10.91□□□□□ -0.66
COMMD3-213ENST00000483684 QPCTQ16769 361 aa10.91□□□□□ -0.66
COMMD3-213ENST00000483684 CSPP1Q1MSJ5 1256 aa10.91□□□□□ -0.66
COMMD3-213ENST00000483684 C1QTNF2Q9BXJ5 285 aa10.91□□□□□ -0.66
COMMD3-213ENST00000483684 AGERQ15109 404 aa10.89□□□□□ -0.67
COMMD3-213ENST00000483684 PDE4DQ08499 809 aa10.88□□□□□ -0.67
COMMD3-213ENST00000483684 ARMC2Q8NEN0 867 aa10.88□□□□□ -0.67
COMMD3-213ENST00000483684 MAP4K5Q9Y4K4 846 aa10.87□□□□□ -0.67
COMMD3-213ENST00000483684 SH3BP5LQ7L8J4 393 aa10.86□□□□□ -0.67
COMMD3-213ENST00000483684 TRMT44Q8IYL2 757 aaKnown RBP10.86□□□□□ -0.67
COMMD3-213ENST00000483684 MEIOBQ8N635 442 aa10.86□□□□□ -0.67
COMMD3-213ENST00000483684 NUTM2BA6NNL0 878 aaPredicted RBP10.85□□□□□ -0.67
COMMD3-213ENST00000483684 NUTM2EB1AL46 878 aaPredicted RBP10.85□□□□□ -0.67
COMMD3-213ENST00000483684 C6orf118Q5T5N4 469 aa10.85□□□□□ -0.67
COMMD3-213ENST00000483684 NUTM2DQ5VT03 806 aaPredicted RBP10.85□□□□□ -0.67
COMMD3-213ENST00000483684 NUTM2AQ8IVF1 878 aaPredicted RBP10.85□□□□□ -0.67
COMMD3-213ENST00000483684 LINC00528Q8N1L1 170 aa10.85□□□□□ -0.67
COMMD3-213ENST00000483684 TSC1Q92574 1164 aa10.85□□□□□ -0.67
COMMD3-213ENST00000483684 RTL5Q5HYW3 569 aaPredicted RBP10.84□□□□□ -0.67
COMMD3-213ENST00000483684 MAN1A2O60476 641 aa10.83□□□□□ -0.68
COMMD3-213ENST00000483684 NBPF14Q5TI25 921 aa10.83□□□□□ -0.68
COMMD3-213ENST00000483684 SOS2Q07890 1332 aaPredicted RBP10.83□□□□□ -0.68
COMMD3-213ENST00000483684 PPFIA3O75145 1194 aa10.82□□□□□ -0.68
COMMD3-213ENST00000483684 FSHRP23945 695 aa10.82□□□□□ -0.68
COMMD3-213ENST00000483684 BMP2P12643 396 aa10.81□□□□□ -0.68
COMMD3-213ENST00000483684 SUZ12Q15022 739 aaKnown RBP10.81□□□□□ -0.68
COMMD3-213ENST00000483684 HELBQ8NG08 1087 aaPredicted RBP10.81□□□□□ -0.68
COMMD3-213ENST00000483684 UPP2O95045 317 aa10.8□□□□□ -0.68
COMMD3-213ENST00000483684 CLK2P49760 499 aaKnown RBP10.8□□□□□ -0.68
COMMD3-213ENST00000483684 VASH1Q7L8A9 365 aaPredicted RBP10.8□□□□□ -0.68
COMMD3-213ENST00000483684 GPKOWQ92917 476 aaPredicted RBP eCLIP10.8□□□□□ -0.68
COMMD3-213ENST00000483684 DNMT3LQ9UJW3 386 aa10.8□□□□□ -0.68
COMMD3-213ENST00000483684 EMILIN1Q9Y6C2 1016 aa10.79□□□□□ -0.68
COMMD3-213ENST00000483684 CCDC116Q8IYX3 515 aa10.78□□□□□ -0.68
COMMD3-213ENST00000483684 SLC24A3Q9HC58 644 aa10.78□□□□□ -0.68
COMMD3-213ENST00000483684 TSEN34Q9BSV6 310 aaKnown RBP10.77□□□□□ -0.69
COMMD3-213ENST00000483684 MAGEB6P1A0A0J9YX57 407 aa10.76□□□□□ -0.69
COMMD3-213ENST00000483684 ERFEQ4G0M1 354 aa10.76□□□□□ -0.69
COMMD3-213ENST00000483684 CTDSPL2Q05D32 466 aa10.74□□□□□ -0.69
COMMD3-213ENST00000483684 Q6ZVU0 165 aa10.74□□□□□ -0.69
COMMD3-213ENST00000483684 RSPH6AQ9H0K4 717 aa10.74□□□□□ -0.69
COMMD3-213ENST00000483684 PDXDC2PQ6P474 469 aa10.73□□□□□ -0.69
COMMD3-213ENST00000483684 CARD14Q9BXL6 1004 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms