RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 MYH16Q9H6N6 1097 aa15.94■□□□□ 0.14
LINC00477-201ENST00000483544 YTHDC2Q9H6S0 1430 aaKnown RBP15.93■□□□□ 0.14
LINC00477-201ENST00000483544 ALKQ9UM73 1620 aa15.93■□□□□ 0.14
LINC00477-201ENST00000483544 TCP11L2Q8N4U5 519 aa15.93■□□□□ 0.14
LINC00477-201ENST00000483544 IPO4Q8TEX9 1081 aaKnown RBP15.93■□□□□ 0.14
LINC00477-201ENST00000483544 PNNQ9H307 717 aaKnown RBP15.93■□□□□ 0.14
LINC00477-201ENST00000483544 KIF20BQ96Q89 1820 aa15.93■□□□□ 0.14
LINC00477-201ENST00000483544 NAP1L2Q9ULW6 460 aaPredicted RBP15.92■□□□□ 0.14
LINC00477-201ENST00000483544 NCLP19338 710 aaKnown RBP15.91■□□□□ 0.14
LINC00477-201ENST00000483544 BRD2P25440 801 aaKnown RBP15.91■□□□□ 0.14
LINC00477-201ENST00000483544 PDCL3Q9H2J4 239 aa15.91■□□□□ 0.14
LINC00477-201ENST00000483544 SPATA31D1Q6ZQQ2 1576 aa15.9■□□□□ 0.14
LINC00477-201ENST00000483544 MAPK8IP3Q9UPT6 1336 aa15.9■□□□□ 0.14
LINC00477-201ENST00000483544 BCAR3O75815 825 aa15.9■□□□□ 0.14
LINC00477-201ENST00000483544 ILDR2Q71H61 639 aa15.9■□□□□ 0.14
LINC00477-201ENST00000483544 A0A1W2PP64 1363 aa15.89■□□□□ 0.13
LINC00477-201ENST00000483544 PMFBP1Q8TBY8 1022 aa15.89■□□□□ 0.13
LINC00477-201ENST00000483544 IL16Q14005 1332 aa15.89■□□□□ 0.13
LINC00477-201ENST00000483544 RARSP54136 660 aaKnown RBP15.88■□□□□ 0.13
LINC00477-201ENST00000483544 CLUAP1Q96AJ1 413 aa15.88■□□□□ 0.13
LINC00477-201ENST00000483544 COL3A1P02461 1466 aaPredicted RBP15.88■□□□□ 0.13
LINC00477-201ENST00000483544 CDC42BPGQ6DT37 1551 aa15.88■□□□□ 0.13
LINC00477-201ENST00000483544 CANXP27824 592 aaKnown RBP15.88■□□□□ 0.13
LINC00477-201ENST00000483544 HDGFL2Q7Z4V5 671 aaPredicted RBP15.88■□□□□ 0.13
LINC00477-201ENST00000483544 ARHGEF40Q8TER5 1519 aa15.88■□□□□ 0.13
LINC00477-201ENST00000483544 ATP7BP35670 1465 aa15.87■□□□□ 0.13
LINC00477-201ENST00000483544 SRPK2P78362 688 aaKnown RBP15.87■□□□□ 0.13
LINC00477-201ENST00000483544 CABP2Q9NPB3 220 aa15.87■□□□□ 0.13
LINC00477-201ENST00000483544 NPM2Q86SE8 214 aaKnown RBP15.86■□□□□ 0.13
LINC00477-201ENST00000483544 POGKQ9P215 609 aa15.86■□□□□ 0.13
LINC00477-201ENST00000483544 DMRT2Q9Y5R5 561 aa15.86■□□□□ 0.13
LINC00477-201ENST00000483544 SETD1AO15047 1707 aaKnown RBP15.86■□□□□ 0.13
LINC00477-201ENST00000483544 NLRP1Q9C000 1473 aa15.85■□□□□ 0.13
LINC00477-201ENST00000483544 CD163L1Q9NR16 1453 aa15.85■□□□□ 0.13
LINC00477-201ENST00000483544 U2AF1L5P0DN76 240 aaPredicted RBP15.85■□□□□ 0.13
LINC00477-201ENST00000483544 TNNT2P45379 298 aaPredicted RBP15.85■□□□□ 0.13
LINC00477-201ENST00000483544 U2AF1Q01081 240 aaKnown RBP eCLIP15.85■□□□□ 0.13
LINC00477-201ENST00000483544 NAP1L5Q96NT1 182 aaPredicted RBP15.85■□□□□ 0.13
LINC00477-201ENST00000483544 PNPLA6Q8IY17 1366 aa15.85■□□□□ 0.13
LINC00477-201ENST00000483544 C8orf34Q49A92 452 aa15.84■□□□□ 0.13
LINC00477-201ENST00000483544 A2ML1A8K2U0 1454 aa15.83■□□□□ 0.13
LINC00477-201ENST00000483544 KNDC1Q76NI1 1749 aa15.83■□□□□ 0.13
LINC00477-201ENST00000483544 FRAT1Q92837 279 aaPredicted RBP15.83■□□□□ 0.13
LINC00477-201ENST00000483544 PRAM1Q96QH2 718 aa15.83■□□□□ 0.13
LINC00477-201ENST00000483544 CLCN1P35523 988 aa15.82■□□□□ 0.12
LINC00477-201ENST00000483544 NUTM2DQ5VT03 806 aaPredicted RBP15.82■□□□□ 0.12
LINC00477-201ENST00000483544 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.82■□□□□ 0.12
LINC00477-201ENST00000483544 BBXQ8WY36 941 aaPredicted RBP15.82■□□□□ 0.12
LINC00477-201ENST00000483544 PLEKHF1Q96S99 279 aa15.82■□□□□ 0.12
LINC00477-201ENST00000483544 FYB1O15117 783 aa15.81■□□□□ 0.12
LINC00477-201ENST00000483544 SIRT1Q96EB6 747 aa15.81■□□□□ 0.12
LINC00477-201ENST00000483544 STK26Q9P289 416 aa15.81■□□□□ 0.12
LINC00477-201ENST00000483544 STAG3Q9UJ98 1225 aa15.81■□□□□ 0.12
LINC00477-201ENST00000483544 TPM2P07951 284 aa15.8■□□□□ 0.12
LINC00477-201ENST00000483544 GTF2E1P29083 439 aaPredicted RBP15.8■□□□□ 0.12
LINC00477-201ENST00000483544 RIMS2Q9UQ26 1411 aa15.8■□□□□ 0.12
LINC00477-201ENST00000483544 TMPOP42166 694 aaKnown RBP15.8■□□□□ 0.12
LINC00477-201ENST00000483544 NEUROD2Q15784 382 aa15.8■□□□□ 0.12
LINC00477-201ENST00000483544 ZNF428Q96B54 188 aa15.8■□□□□ 0.12
LINC00477-201ENST00000483544 CDK19Q9BWU1 502 aa15.8■□□□□ 0.12
LINC00477-201ENST00000483544 MINK1Q8N4C8 1332 aaPredicted RBP15.79■□□□□ 0.12
LINC00477-201ENST00000483544 HOMEZQ8IX15 550 aa15.79■□□□□ 0.12
LINC00477-201ENST00000483544 RWDD1Q9H446 243 aaPredicted RBP15.79■□□□□ 0.12
LINC00477-201ENST00000483544 RRAGDQ9NQL2 400 aaPredicted RBP15.79■□□□□ 0.12
LINC00477-201ENST00000483544 COG6Q9Y2V7 657 aa15.79■□□□□ 0.12
LINC00477-201ENST00000483544 RRP7AQ9Y3A4 280 aaKnown RBP15.79■□□□□ 0.12
LINC00477-201ENST00000483544 TSPOAP1O95153 1857 aa15.79■□□□□ 0.12
LINC00477-201ENST00000483544 DIAPH1O60610 1272 aaKnown RBP15.78■□□□□ 0.12
LINC00477-201ENST00000483544 FCHSD2O94868 740 aa15.78■□□□□ 0.12
LINC00477-201ENST00000483544 HDGFP51858 240 aaKnown RBP15.78■□□□□ 0.12
LINC00477-201ENST00000483544 ZKSCAN2Q63HK3 967 aa15.78■□□□□ 0.12
LINC00477-201ENST00000483544 IGHDP01880 384 aa15.77■□□□□ 0.12
LINC00477-201ENST00000483544 PANK1Q8TE04 598 aa15.77■□□□□ 0.12
LINC00477-201ENST00000483544 FAM135BQ49AJ0 1406 aa15.77■□□□□ 0.11
LINC00477-201ENST00000483544 GGNBP2Q9H3C7 697 aa15.77■□□□□ 0.11
LINC00477-201ENST00000483544 EDC4Q6P2E9 1401 aaKnown RBP15.76■□□□□ 0.11
LINC00477-201ENST00000483544 SAFB2Q14151 953 aaKnown RBP eCLIP15.76■□□□□ 0.11
LINC00477-201ENST00000483544 MVPQ14764 893 aaKnown RBP15.76■□□□□ 0.11
LINC00477-201ENST00000483544 FBXO31Q5XUX0 539 aaPredicted RBP15.76■□□□□ 0.11
LINC00477-201ENST00000483544 MAP2P11137 1827 aaKnown RBP15.75■□□□□ 0.11
LINC00477-201ENST00000483544 RGS3P49796 1198 aa15.75■□□□□ 0.11
LINC00477-201ENST00000483544 SMAP1Q8IYB5 467 aaPredicted RBP15.75■□□□□ 0.11
LINC00477-201ENST00000483544 TECPR2O15040 1411 aa15.75■□□□□ 0.11
LINC00477-201ENST00000483544 PPIP5K1Q6PFW1 1433 aa15.75■□□□□ 0.11
LINC00477-201ENST00000483544 NRXN3Q9Y4C0 1643 aa15.75■□□□□ 0.11
LINC00477-201ENST00000483544 DZIP1LQ8IYY4 767 aaKnown RBP15.74■□□□□ 0.11
LINC00477-201ENST00000483544 MAP7D2Q96T17 732 aa15.74■□□□□ 0.11
LINC00477-201ENST00000483544 MON2Q7Z3U7 1717 aa15.74■□□□□ 0.11
LINC00477-201ENST00000483544 AATKQ6ZMQ8 1374 aa15.74■□□□□ 0.11
LINC00477-201ENST00000483544 U2SURPO15042 1029 aaKnown RBP15.74■□□□□ 0.11
LINC00477-201ENST00000483544 IPO8O15397 1037 aaKnown RBP15.74■□□□□ 0.11
LINC00477-201ENST00000483544 BRPF1P55201 1214 aaPredicted RBP15.74■□□□□ 0.11
LINC00477-201ENST00000483544 ALDH1L2Q3SY69 923 aa15.74■□□□□ 0.11
LINC00477-201ENST00000483544 L1TD1Q5T7N2 865 aaKnown RBP15.74■□□□□ 0.11
LINC00477-201ENST00000483544 PAXIP1Q6ZW49 1069 aaPredicted RBP15.74■□□□□ 0.11
LINC00477-201ENST00000483544 TRIM35Q9UPQ4 493 aa15.74■□□□□ 0.11
LINC00477-201ENST00000483544 LAS1LQ9Y4W2 734 aaKnown RBP15.74■□□□□ 0.11
LINC00477-201ENST00000483544 CPSF1Q10570 1443 aaKnown RBP15.73■□□□□ 0.11
LINC00477-201ENST00000483544 KIF16BQ96L93 1317 aa15.73■□□□□ 0.11
LINC00477-201ENST00000483544 AKAP12Q02952 1782 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms