RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 SPTLC1O15269 473 aa7.31□□□□□ -1.24
LRCH3-217ENST00000483442 HRCP23327 699 aa7.31□□□□□ -1.24
LRCH3-217ENST00000483442 AK7Q96M32 723 aa7.31□□□□□ -1.24
LRCH3-217ENST00000483442 BMP1P13497 986 aa7.3□□□□□ -1.24
LRCH3-217ENST00000483442 DESI1Q6ICB0 168 aa7.3□□□□□ -1.24
LRCH3-217ENST00000483442 TRIM47Q96LD4 638 aa7.3□□□□□ -1.24
LRCH3-217ENST00000483442 TLL2Q9Y6L7 1015 aa7.3□□□□□ -1.24
LRCH3-217ENST00000483442 PER1O15534 1290 aaPredicted RBP7.29□□□□□ -1.24
LRCH3-217ENST00000483442 CSPP1Q1MSJ5 1256 aa7.29□□□□□ -1.24
LRCH3-217ENST00000483442 LYPD8Q6UX82 237 aa7.29□□□□□ -1.24
LRCH3-217ENST00000483442 TRIM46Q7Z4K8 759 aa7.29□□□□□ -1.24
LRCH3-217ENST00000483442 RIC3Q7Z5B4 369 aa7.29□□□□□ -1.24
LRCH3-217ENST00000483442 ZNF511Q8NB15 262 aa7.29□□□□□ -1.24
LRCH3-217ENST00000483442 SLC24A3Q9HC58 644 aa7.29□□□□□ -1.24
LRCH3-217ENST00000483442 MAP10Q9P2G4 905 aa7.29□□□□□ -1.24
LRCH3-217ENST00000483442 LIMD1Q9UGP4 676 aa7.29□□□□□ -1.24
LRCH3-217ENST00000483442 SPDYE5A6NIY4 337 aa7.28□□□□□ -1.24
LRCH3-217ENST00000483442 WFS1O76024 890 aa7.28□□□□□ -1.24
LRCH3-217ENST00000483442 GJA5P36382 358 aa7.28□□□□□ -1.24
LRCH3-217ENST00000483442 PDE4DQ08499 809 aa7.28□□□□□ -1.24
LRCH3-217ENST00000483442 QPCTQ16769 361 aa7.28□□□□□ -1.24
LRCH3-217ENST00000483442 F12P00748 615 aaPredicted RBP7.27□□□□□ -1.25
LRCH3-217ENST00000483442 FOXJ1Q92949 421 aa7.27□□□□□ -1.25
LRCH3-217ENST00000483442 CAPN5O15484 640 aaPredicted RBP7.26□□□□□ -1.25
LRCH3-217ENST00000483442 CTHP32929 405 aa7.26□□□□□ -1.25
LRCH3-217ENST00000483442 MYSM1Q5VVJ2 828 aa7.26□□□□□ -1.25
LRCH3-217ENST00000483442 WASF2Q9Y6W5 498 aa7.26□□□□□ -1.25
LRCH3-217ENST00000483442 ZCCHC6Q5VYS8 1495 aaKnown RBP7.25□□□□□ -1.25
LRCH3-217ENST00000483442 TERTO14746 1132 aaKnown RBP7.25□□□□□ -1.25
LRCH3-217ENST00000483442 C4orf48Q5BLP8 95 aa7.25□□□□□ -1.25
LRCH3-217ENST00000483442 ZBTB3Q9H5J0 574 aa7.25□□□□□ -1.25
LRCH3-217ENST00000483442 SENP2Q9HC62 589 aa7.25□□□□□ -1.25
LRCH3-217ENST00000483442 DCAF1Q9Y4B6 1507 aa7.25□□□□□ -1.25
LRCH3-217ENST00000483442 VARSP26640 1264 aaKnown RBP7.24□□□□□ -1.25
LRCH3-217ENST00000483442 NNTQ13423 1086 aa7.23□□□□□ -1.25
LRCH3-217ENST00000483442 DIXDC1Q155Q3 683 aa7.23□□□□□ -1.25
LRCH3-217ENST00000483442 RTL5Q5HYW3 569 aaPredicted RBP7.23□□□□□ -1.25
LRCH3-217ENST00000483442 PRPF38BQ5VTL8 546 aaKnown RBP7.23□□□□□ -1.25
LRCH3-217ENST00000483442 LILRB3O75022 631 aa7.22□□□□□ -1.25
LRCH3-217ENST00000483442 FBXO31Q5XUX0 539 aaPredicted RBP7.22□□□□□ -1.25
LRCH3-217ENST00000483442 KLF16Q9BXK1 252 aaPredicted RBP7.22□□□□□ -1.25
LRCH3-217ENST00000483442 TIMP2P16035 220 aa7.21□□□□□ -1.26
LRCH3-217ENST00000483442 MPNDQ8N594 471 aa7.21□□□□□ -1.26
LRCH3-217ENST00000483442 TSC1Q92574 1164 aa7.21□□□□□ -1.26
LRCH3-217ENST00000483442 KIFC2Q96AC6 838 aa7.21□□□□□ -1.26
LRCH3-217ENST00000483442 ZFP42Q96MM3 310 aa7.21□□□□□ -1.26
LRCH3-217ENST00000483442 WIPF1O43516 503 aa7.2□□□□□ -1.26
LRCH3-217ENST00000483442 VEGFBP49765 207 aa7.2□□□□□ -1.26
LRCH3-217ENST00000483442 NUTM2BA6NNL0 878 aaPredicted RBP7.19□□□□□ -1.26
LRCH3-217ENST00000483442 NUTM2EB1AL46 878 aaPredicted RBP7.19□□□□□ -1.26
LRCH3-217ENST00000483442 NR3C2P08235 984 aa7.19□□□□□ -1.26
LRCH3-217ENST00000483442 TUSC1Q2TAM9 212 aa7.19□□□□□ -1.26
LRCH3-217ENST00000483442 NUTM2DQ5VT03 806 aaPredicted RBP7.19□□□□□ -1.26
LRCH3-217ENST00000483442 NUTM2AQ8IVF1 878 aaPredicted RBP7.19□□□□□ -1.26
LRCH3-217ENST00000483442 CDK15Q96Q40 435 aa7.19□□□□□ -1.26
LRCH3-217ENST00000483442 POLR3EQ9NVU0 708 aa7.19□□□□□ -1.26
LRCH3-217ENST00000483442 NESP48681 1621 aa7.19□□□□□ -1.26
LRCH3-217ENST00000483442 PLEKHG3A1L390 1219 aa7.18□□□□□ -1.26
LRCH3-217ENST00000483442 SOBPA7XYQ1 873 aa7.18□□□□□ -1.26
LRCH3-217ENST00000483442 ADH1CP00326 375 aa7.18□□□□□ -1.26
LRCH3-217ENST00000483442 GRM5P41594 1212 aa7.18□□□□□ -1.26
LRCH3-217ENST00000483442 ARID5BQ14865 1188 aa7.18□□□□□ -1.26
LRCH3-217ENST00000483442 FAM174AQ8TBP5 190 aa7.18□□□□□ -1.26
LRCH3-217ENST00000483442 ZFAND3Q9H8U3 227 aa7.18□□□□□ -1.26
LRCH3-217ENST00000483442 WDR4P57081 412 aaKnown RBP7.17□□□□□ -1.26
LRCH3-217ENST00000483442 PURBQ96QR8 312 aaKnown RBP7.17□□□□□ -1.26
LRCH3-217ENST00000483442 NCAPD3P42695 1498 aa7.17□□□□□ -1.26
LRCH3-217ENST00000483442 CLK2P49760 499 aaKnown RBP7.16□□□□□ -1.26
LRCH3-217ENST00000483442 MRPL14Q6P1L8 145 aaKnown RBP7.16□□□□□ -1.26
LRCH3-217ENST00000483442 ITPKCQ96DU7 683 aa7.16□□□□□ -1.26
LRCH3-217ENST00000483442 NXF1Q9UBU9 619 aaKnown RBP7.16□□□□□ -1.26
LRCH3-217ENST00000483442 LORP23490 312 aaPredicted RBP7.15□□□□□ -1.26
LRCH3-217ENST00000483442 CTDSPL2Q05D32 466 aa7.15□□□□□ -1.26
LRCH3-217ENST00000483442 SH3RF1Q7Z6J0 888 aa7.15□□□□□ -1.26
LRCH3-217ENST00000483442 ERBB4Q15303 1308 aa7.15□□□□□ -1.26
LRCH3-217ENST00000483442 ZIC2O95409 532 aaPredicted RBP7.14□□□□□ -1.27
LRCH3-217ENST00000483442 GMPRP36959 345 aa7.14□□□□□ -1.27
LRCH3-217ENST00000483442 AGERQ15109 404 aa7.14□□□□□ -1.27
LRCH3-217ENST00000483442 SH3BP5LQ7L8J4 393 aa7.14□□□□□ -1.27
LRCH3-217ENST00000483442 C1QTNF2Q9BXJ5 285 aa7.14□□□□□ -1.27
LRCH3-217ENST00000483442 GPBP1L1Q9HC44 474 aaPredicted RBP7.14□□□□□ -1.27
LRCH3-217ENST00000483442 BPHLQ86WA6 291 aaPredicted RBP7.13□□□□□ -1.27
LRCH3-217ENST00000483442 PROCA1Q8NCQ7 364 aaPredicted RBP7.13□□□□□ -1.27
LRCH3-217ENST00000483442 H3BM21 787 aa7.12□□□□□ -1.27
LRCH3-217ENST00000483442 LRRN4Q8WUT4 740 aa7.12□□□□□ -1.27
LRCH3-217ENST00000483442 NR5A1Q13285 461 aa7.11□□□□□ -1.27
LRCH3-217ENST00000483442 FAM117AQ9C073 453 aa7.11□□□□□ -1.27
LRCH3-217ENST00000483442 ATAD2BQ9ULI0 1458 aa7.11□□□□□ -1.27
LRCH3-217ENST00000483442 MAGEB6P1A0A0J9YX57 407 aa7.1□□□□□ -1.27
LRCH3-217ENST00000483442 C6orf118Q5T5N4 469 aa7.1□□□□□ -1.27
LRCH3-217ENST00000483442 HELBQ8NG08 1087 aaPredicted RBP7.1□□□□□ -1.27
LRCH3-217ENST00000483442 SLC16A10Q8TF71 515 aa7.1□□□□□ -1.27
LRCH3-217ENST00000483442 CARD14Q9BXL6 1004 aa7.1□□□□□ -1.27
LRCH3-217ENST00000483442 FSHRP23945 695 aa7.09□□□□□ -1.27
LRCH3-217ENST00000483442 INSM1Q01101 510 aaPredicted RBP7.09□□□□□ -1.27
LRCH3-217ENST00000483442 SCARF1Q14162 830 aa7.09□□□□□ -1.27
LRCH3-217ENST00000483442 ERFEQ4G0M1 354 aa7.09□□□□□ -1.27
LRCH3-217ENST00000483442 OCSTAMPQ9BR26 566 aa7.09□□□□□ -1.27
LRCH3-217ENST00000483442 RSPH6AQ9H0K4 717 aa7.09□□□□□ -1.27
LRCH3-217ENST00000483442 KDM4CQ9H3R0 1056 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms