RNA–Protein interactions for RNA: ENST00000483326.1

LTN1-205, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene LTN1, Length 1,753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-205ENST00000483326 SMCPP49901 116 aaPredicted RBP6.49□□□□□ -1.37
LTN1-205ENST00000483326 SKOR1P84550 965 aa6.49□□□□□ -1.37
LTN1-205ENST00000483326 PRPF38BQ5VTL8 546 aaKnown RBP6.49□□□□□ -1.37
LTN1-205ENST00000483326 PTCRAQ6ISU1 281 aaPredicted RBP6.49□□□□□ -1.37
LTN1-205ENST00000483326 RIC3Q7Z5B4 369 aa6.49□□□□□ -1.37
LTN1-205ENST00000483326 ZBTB3Q9H5J0 574 aa6.49□□□□□ -1.37
LTN1-205ENST00000483326 ST8SIA5O15466 376 aa6.48□□□□□ -1.37
LTN1-205ENST00000483326 SMPD1P17405 629 aa6.48□□□□□ -1.37
LTN1-205ENST00000483326 KCNH2Q12809 1159 aa6.48□□□□□ -1.37
LTN1-205ENST00000483326 CCDC82Q8N4S0 544 aa6.48□□□□□ -1.37
LTN1-205ENST00000483326 LOC105371045A0A1W2PR82 267 aa6.47□□□□□ -1.37
LTN1-205ENST00000483326 TRAIPQ9BWF2 469 aa6.47□□□□□ -1.37
LTN1-205ENST00000483326 TUSC1Q2TAM9 212 aa6.46□□□□□ -1.37
LTN1-205ENST00000483326 PCDHB15Q9Y5E8 787 aa6.46□□□□□ -1.37
LTN1-205ENST00000483326 SHROOM4Q9ULL8 1493 aa6.46□□□□□ -1.37
LTN1-205ENST00000483326 RAD21O60216 631 aa6.46□□□□□ -1.38
LTN1-205ENST00000483326 LYPD8Q6UX82 237 aa6.46□□□□□ -1.38
LTN1-205ENST00000483326 EHBP1Q8NDI1 1231 aa6.46□□□□□ -1.38
LTN1-205ENST00000483326 UNC93B1Q9H1C4 597 aa6.46□□□□□ -1.38
LTN1-205ENST00000483326 A6NJR5 290 aa6.45□□□□□ -1.38
LTN1-205ENST00000483326 J3QL48 77 aa6.45□□□□□ -1.38
LTN1-205ENST00000483326 SH3BP2P78314 561 aa6.44□□□□□ -1.38
LTN1-205ENST00000483326 MYSM1Q5VVJ2 828 aa6.44□□□□□ -1.38
LTN1-205ENST00000483326 NUTM2BA6NNL0 878 aaPredicted RBP6.44□□□□□ -1.38
LTN1-205ENST00000483326 NUTM2EB1AL46 878 aaPredicted RBP6.44□□□□□ -1.38
LTN1-205ENST00000483326 POTECB2RU33 542 aa6.44□□□□□ -1.38
LTN1-205ENST00000483326 CFAP99D6REC4 459 aa6.44□□□□□ -1.38
LTN1-205ENST00000483326 ALDH1A1P00352 501 aa6.44□□□□□ -1.38
LTN1-205ENST00000483326 CTHP32929 405 aa6.44□□□□□ -1.38
LTN1-205ENST00000483326 CSPP1Q1MSJ5 1256 aa6.44□□□□□ -1.38
LTN1-205ENST00000483326 NUTM2DQ5VT03 806 aaPredicted RBP6.44□□□□□ -1.38
LTN1-205ENST00000483326 NUTM2AQ8IVF1 878 aaPredicted RBP6.44□□□□□ -1.38
LTN1-205ENST00000483326 ZNF775Q96BV0 537 aaPredicted RBP6.44□□□□□ -1.38
LTN1-205ENST00000483326 SIAH2O43255 324 aa6.43□□□□□ -1.38
LTN1-205ENST00000483326 TRAK2O60296 914 aa6.43□□□□□ -1.38
LTN1-205ENST00000483326 CABLES1Q8TDN4 633 aa6.43□□□□□ -1.38
LTN1-205ENST00000483326 BAP1Q92560 729 aa6.43□□□□□ -1.38
LTN1-205ENST00000483326 RGS22Q8NE09 1264 aa6.42□□□□□ -1.38
LTN1-205ENST00000483326 HPS1Q92902 700 aa6.42□□□□□ -1.38
LTN1-205ENST00000483326 LIMD1Q9UGP4 676 aa6.42□□□□□ -1.38
LTN1-205ENST00000483326 WASF2Q9Y6W5 498 aa6.42□□□□□ -1.38
LTN1-205ENST00000483326 PLEKHG3A1L390 1219 aa6.41□□□□□ -1.38
LTN1-205ENST00000483326 LILRB3O75022 631 aa6.41□□□□□ -1.38
LTN1-205ENST00000483326 VARSP26640 1264 aaKnown RBP6.41□□□□□ -1.38
LTN1-205ENST00000483326 LINC01559Q495D7 138 aa6.41□□□□□ -1.38
LTN1-205ENST00000483326 ZNF511Q8NB15 262 aa6.41□□□□□ -1.38
LTN1-205ENST00000483326 DDRGK1Q96HY6 314 aa6.41□□□□□ -1.38
LTN1-205ENST00000483326 DACH1Q9UI36 760 aa6.41□□□□□ -1.38
LTN1-205ENST00000483326 C11orf95C9JLR9 678 aaPredicted RBP6.41□□□□□ -1.38
LTN1-205ENST00000483326 CLK2P49760 499 aaKnown RBP6.41□□□□□ -1.38
LTN1-205ENST00000483326 FAM117AQ9C073 453 aa6.41□□□□□ -1.38
LTN1-205ENST00000483326 GMPR2Q9P2T1 348 aaKnown RBP6.41□□□□□ -1.38
LTN1-205ENST00000483326 HMGB1P09429 215 aaKnown RBP6.4□□□□□ -1.38
LTN1-205ENST00000483326 TMCO4Q5TGY1 634 aa6.4□□□□□ -1.38
LTN1-205ENST00000483326 MPNDQ8N594 471 aa6.4□□□□□ -1.38
LTN1-205ENST00000483326 HELBQ8NG08 1087 aaPredicted RBP6.4□□□□□ -1.38
LTN1-205ENST00000483326 SENP2Q9HC62 589 aa6.4□□□□□ -1.38
LTN1-205ENST00000483326 ATP13A2Q9NQ11 1180 aa6.4□□□□□ -1.38
LTN1-205ENST00000483326 ATP1B4Q9UN42 357 aaPredicted RBP6.4□□□□□ -1.38
LTN1-205ENST00000483326 F12P00748 615 aaPredicted RBP6.39□□□□□ -1.39
LTN1-205ENST00000483326 QPCTQ16769 361 aa6.39□□□□□ -1.39
LTN1-205ENST00000483326 ARMC2Q8NEN0 867 aa6.39□□□□□ -1.39
LTN1-205ENST00000483326 TSC1Q92574 1164 aa6.39□□□□□ -1.39
LTN1-205ENST00000483326 IGSF3O75054 1194 aa6.39□□□□□ -1.39
LTN1-205ENST00000483326 AEBP1Q8IUX7 1158 aa6.39□□□□□ -1.39
LTN1-205ENST00000483326 FAM174AQ8TBP5 190 aa6.39□□□□□ -1.39
LTN1-205ENST00000483326 KIFC2Q96AC6 838 aa6.38□□□□□ -1.39
LTN1-205ENST00000483326 POLR3EQ9NVU0 708 aa6.38□□□□□ -1.39
LTN1-205ENST00000483326 MAP10Q9P2G4 905 aa6.38□□□□□ -1.39
LTN1-205ENST00000483326 CLUAP1Q96AJ1 413 aa6.37□□□□□ -1.39
LTN1-205ENST00000483326 MTMR7Q9Y216 660 aa6.37□□□□□ -1.39
LTN1-205ENST00000483326 PER1O15534 1290 aaPredicted RBP6.36□□□□□ -1.39
LTN1-205ENST00000483326 SKIV2LQ15477 1246 aaKnown RBP6.36□□□□□ -1.39
LTN1-205ENST00000483326 RTL5Q5HYW3 569 aaPredicted RBP6.36□□□□□ -1.39
LTN1-205ENST00000483326 TRIM47Q96LD4 638 aa6.36□□□□□ -1.39
LTN1-205ENST00000483326 GOPCQ9HD26 462 aa6.36□□□□□ -1.39
LTN1-205ENST00000483326 SERPINA10Q9UK55 444 aa6.36□□□□□ -1.39
LTN1-205ENST00000483326 CAPN5O15484 640 aaPredicted RBP6.36□□□□□ -1.39
LTN1-205ENST00000483326 AGERQ15109 404 aa6.36□□□□□ -1.39
LTN1-205ENST00000483326 BPHLQ86WA6 291 aaPredicted RBP6.36□□□□□ -1.39
LTN1-205ENST00000483326 MFAP1P55081 439 aaKnown RBP6.35□□□□□ -1.39
LTN1-205ENST00000483326 SH3D19Q5HYK7 790 aa6.35□□□□□ -1.39
LTN1-205ENST00000483326 NBPF14Q5TI25 921 aa6.35□□□□□ -1.39
LTN1-205ENST00000483326 TREML4Q6UXN2 200 aa6.35□□□□□ -1.39
LTN1-205ENST00000483326 CCDC97Q96F63 343 aaPredicted RBP6.35□□□□□ -1.39
LTN1-205ENST00000483326 TLL2Q9Y6L7 1015 aa6.35□□□□□ -1.39
LTN1-205ENST00000483326 FOXJ1Q92949 421 aa6.34□□□□□ -1.39
LTN1-205ENST00000483326 CDK15Q96Q40 435 aa6.34□□□□□ -1.39
LTN1-205ENST00000483326 NNTQ13423 1086 aa6.34□□□□□ -1.4
LTN1-205ENST00000483326 GPKOWQ92917 476 aaPredicted RBP eCLIP6.34□□□□□ -1.4
LTN1-205ENST00000483326 ADH1CP00326 375 aa6.33□□□□□ -1.4
LTN1-205ENST00000483326 RBM25P49756 843 aaKnown RBP6.33□□□□□ -1.4
LTN1-205ENST00000483326 SNRPBP14678 240 aaKnown RBP6.32□□□□□ -1.4
LTN1-205ENST00000483326 GZF1Q9H116 711 aaPredicted RBP6.32□□□□□ -1.4
LTN1-205ENST00000483326 HSP90B1P14625 803 aaKnown RBP6.31□□□□□ -1.4
LTN1-205ENST00000483326 NR5A1Q13285 461 aa6.31□□□□□ -1.4
LTN1-205ENST00000483326 ARID5BQ14865 1188 aa6.31□□□□□ -1.4
LTN1-205ENST00000483326 WFS1O76024 890 aa6.31□□□□□ -1.4
LTN1-205ENST00000483326 CENPBP07199 599 aaPredicted RBP6.31□□□□□ -1.4
LTN1-205ENST00000483326 CTDSPL2Q05D32 466 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms