RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-229ENST00000483159 HAP1P54257 671 aaPredicted RBP17.41■□□□□ 0.38
MRPL55-229ENST00000483159 CABLES1Q8TDN4 633 aa17.4■□□□□ 0.38
MRPL55-229ENST00000483159 TRPM3Q9HCF6 1732 aaPredicted RBP17.4■□□□□ 0.38
MRPL55-229ENST00000483159 USP47Q96K76 1375 aa17.4■□□□□ 0.38
MRPL55-229ENST00000483159 SOCS7O14512 581 aa17.39■□□□□ 0.37
MRPL55-229ENST00000483159 QTRT2Q9H974 415 aaKnown RBP17.38■□□□□ 0.37
MRPL55-229ENST00000483159 USP21Q9UK80 565 aa17.38■□□□□ 0.37
MRPL55-229ENST00000483159 RXRBP28702 533 aa17.37■□□□□ 0.37
MRPL55-229ENST00000483159 ABTB2Q8N961 1025 aa17.37■□□□□ 0.37
MRPL55-229ENST00000483159 ALS2Q96Q42 1657 aa17.36■□□□□ 0.37
MRPL55-229ENST00000483159 USP6P35125 1406 aa17.36■□□□□ 0.37
MRPL55-229ENST00000483159 TMF1P82094 1093 aa17.35■□□□□ 0.37
MRPL55-229ENST00000483159 NLRP13Q86W25 1043 aa17.35■□□□□ 0.37
MRPL55-229ENST00000483159 TRPC5Q9UL62 973 aaPredicted RBP17.35■□□□□ 0.37
MRPL55-229ENST00000483159 PLEKHG5O94827 1062 aa17.34■□□□□ 0.37
MRPL55-229ENST00000483159 RBM6P78332 1123 aaKnown RBP17.34■□□□□ 0.37
MRPL55-229ENST00000483159 CPSF1Q10570 1443 aaKnown RBP17.34■□□□□ 0.37
MRPL55-229ENST00000483159 SSH2Q76I76 1423 aa17.34■□□□□ 0.37
MRPL55-229ENST00000483159 BCL9LQ86UU0 1499 aa17.33■□□□□ 0.37
MRPL55-229ENST00000483159 FAM83GA6ND36 823 aa17.33■□□□□ 0.36
MRPL55-229ENST00000483159 CDCA8Q53HL2 280 aa17.33■□□□□ 0.36
MRPL55-229ENST00000483159 TMC1Q8TDI8 760 aa17.33■□□□□ 0.36
MRPL55-229ENST00000483159 NINLQ9Y2I6 1382 aa17.32■□□□□ 0.36
MRPL55-229ENST00000483159 UNC5CLQ8IV45 518 aa17.32■□□□□ 0.36
MRPL55-229ENST00000483159 SLC12A5Q9H2X9 1139 aa17.32■□□□□ 0.36
MRPL55-229ENST00000483159 TERF2IPQ9NYB0 399 aa17.32■□□□□ 0.36
MRPL55-229ENST00000483159 SLIT2O94813 1529 aa17.31■□□□□ 0.36
MRPL55-229ENST00000483159 KTN1Q86UP2 1357 aaKnown RBP17.31■□□□□ 0.36
MRPL55-229ENST00000483159 TTC21AQ8NDW8 1320 aa17.31■□□□□ 0.36
MRPL55-229ENST00000483159 NUTM2GQ5VZR2 741 aa17.31■□□□□ 0.36
MRPL55-229ENST00000483159 HDGFL2Q7Z4V5 671 aaPredicted RBP17.31■□□□□ 0.36
MRPL55-229ENST00000483159 USP19O94966 1318 aa17.3■□□□□ 0.36
MRPL55-229ENST00000483159 TTC21BQ7Z4L5 1316 aa17.3■□□□□ 0.36
MRPL55-229ENST00000483159 NLRP6P59044 892 aa17.3■□□□□ 0.36
MRPL55-229ENST00000483159 CDK12Q9NYV4 1490 aaPredicted RBP17.3■□□□□ 0.36
MRPL55-229ENST00000483159 ATRNO75882 1429 aa17.3■□□□□ 0.36
MRPL55-229ENST00000483159 EIF4G2P78344 907 aaKnown RBP eCLIP17.29■□□□□ 0.36
MRPL55-229ENST00000483159 MARF1Q9Y4F3 1742 aaKnown RBP17.29■□□□□ 0.36
MRPL55-229ENST00000483159 GCP02774 474 aa17.28■□□□□ 0.36
MRPL55-229ENST00000483159 GJD4Q96KN9 370 aaPredicted RBP17.28■□□□□ 0.36
MRPL55-229ENST00000483159 PRDM11Q9NQV5 511 aa17.28■□□□□ 0.36
MRPL55-229ENST00000483159 CD163L1Q9NR16 1453 aa17.27■□□□□ 0.36
MRPL55-229ENST00000483159 ABCA3Q99758 1704 aa17.27■□□□□ 0.35
MRPL55-229ENST00000483159 VPS72Q15906 364 aa17.26■□□□□ 0.35
MRPL55-229ENST00000483159 BTG4Q9NY30 223 aa17.26■□□□□ 0.35
MRPL55-229ENST00000483159 CPDO75976 1380 aa17.26■□□□□ 0.35
MRPL55-229ENST00000483159 KIAA0232Q92628 1395 aa17.26■□□□□ 0.35
MRPL55-229ENST00000483159 ZC3H6P61129 1189 aaKnown RBP17.25■□□□□ 0.35
MRPL55-229ENST00000483159 CRYBG1Q9Y4K1 1723 aa17.24■□□□□ 0.35
MRPL55-229ENST00000483159 EDC4Q6P2E9 1401 aaKnown RBP17.24■□□□□ 0.35
MRPL55-229ENST00000483159 KCNH5Q8NCM2 988 aa17.24■□□□□ 0.35
MRPL55-229ENST00000483159 A0A1W2PP64 1363 aa17.24■□□□□ 0.35
MRPL55-229ENST00000483159 HSPA5P11021 654 aaKnown RBP17.23■□□□□ 0.35
MRPL55-229ENST00000483159 USP31Q70CQ4 1352 aa17.23■□□□□ 0.35
MRPL55-229ENST00000483159 AKAP12Q02952 1782 aa17.23■□□□□ 0.35
MRPL55-229ENST00000483159 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.22■□□□□ 0.35
MRPL55-229ENST00000483159 COL14A1Q05707 1796 aaKnown RBP17.22■□□□□ 0.35
MRPL55-229ENST00000483159 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.21■□□□□ 0.35
MRPL55-229ENST00000483159 NWD2Q9ULI1 1742 aa17.21■□□□□ 0.35
MRPL55-229ENST00000483159 ANKRD36BQ8N2N9 1353 aa17.21■□□□□ 0.35
MRPL55-229ENST00000483159 CHRNA2Q15822 529 aa17.21■□□□□ 0.35
MRPL55-229ENST00000483159 PHRF1Q9P1Y6 1649 aaKnown RBP17.21■□□□□ 0.35
MRPL55-229ENST00000483159 SLIT3O75094 1523 aa17.21■□□□□ 0.34
MRPL55-229ENST00000483159 ONECUT3O60422 494 aaPredicted RBP17.2■□□□□ 0.34
MRPL55-229ENST00000483159 NRKQ7Z2Y5 1582 aa17.19■□□□□ 0.34
MRPL55-229ENST00000483159 NME9Q86XW9 330 aa17.19■□□□□ 0.34
MRPL55-229ENST00000483159 CCDC9Q9Y3X0 531 aaKnown RBP17.19■□□□□ 0.34
MRPL55-229ENST00000483159 RGS12O14924 1447 aa17.19■□□□□ 0.34
MRPL55-229ENST00000483159 PIK3C2AO00443 1686 aa17.19■□□□□ 0.34
MRPL55-229ENST00000483159 PLCH1Q4KWH8 1693 aa17.19■□□□□ 0.34
MRPL55-229ENST00000483159 MON2Q7Z3U7 1717 aa17.18■□□□□ 0.34
MRPL55-229ENST00000483159 AATKQ6ZMQ8 1374 aa17.18■□□□□ 0.34
MRPL55-229ENST00000483159 EVA1CP58658 441 aa17.18■□□□□ 0.34
MRPL55-229ENST00000483159 ARHGEF25Q86VW2 580 aa17.17■□□□□ 0.34
MRPL55-229ENST00000483159 SPATA31A5Q5VU36 1347 aa17.17■□□□□ 0.34
MRPL55-229ENST00000483159 SPATA31A7Q8IWB4 1347 aa17.17■□□□□ 0.34
MRPL55-229ENST00000483159 ZRANB1Q9UGI0 708 aa17.16■□□□□ 0.34
MRPL55-229ENST00000483159 STRN4Q9NRL3 753 aa17.15■□□□□ 0.34
MRPL55-229ENST00000483159 GLI3P10071 1580 aa17.15■□□□□ 0.34
MRPL55-229ENST00000483159 SPATA31A1Q5TZJ5 1347 aa17.14■□□□□ 0.33
MRPL55-229ENST00000483159 CAMTA1Q9Y6Y1 1673 aa17.13■□□□□ 0.33
MRPL55-229ENST00000483159 SEPT12Q8IYM1 358 aa17.13■□□□□ 0.33
MRPL55-229ENST00000483159 COG3Q96JB2 828 aa17.13■□□□□ 0.33
MRPL55-229ENST00000483159 NRAPQ86VF7 1730 aa17.13■□□□□ 0.33
MRPL55-229ENST00000483159 ZBTB7CA1YPR0 619 aa17.12■□□□□ 0.33
MRPL55-229ENST00000483159 FYB1O15117 783 aa17.12■□□□□ 0.33
MRPL55-229ENST00000483159 SOX12O15370 315 aa17.12■□□□□ 0.33
MRPL55-229ENST00000483159 CARD14Q9BXL6 1004 aa17.12■□□□□ 0.33
MRPL55-229ENST00000483159 OVOS2A0A0J9YW53 1432 aa17.12■□□□□ 0.33
MRPL55-229ENST00000483159 OVOS2Q6IE36 1432 aa17.12■□□□□ 0.33
MRPL55-229ENST00000483159 LMO7Q8WWI1 1683 aa17.11■□□□□ 0.33
MRPL55-229ENST00000483159 FAM98CQ17RN3 349 aaKnown RBP17.11■□□□□ 0.33
MRPL55-229ENST00000483159 LARP1Q6PKG0 1096 aaKnown RBP17.11■□□□□ 0.33
MRPL55-229ENST00000483159 AXIN2Q9Y2T1 843 aa17.11■□□□□ 0.33
MRPL55-229ENST00000483159 NFAT5O94916 1531 aa17.11■□□□□ 0.33
MRPL55-229ENST00000483159 USP54Q70EL1 1684 aa17.1■□□□□ 0.33
MRPL55-229ENST00000483159 BARGINQ6ZT62 677 aa17.1■□□□□ 0.33
MRPL55-229ENST00000483159 UPF1Q92900 1129 aaKnown RBP eCLIP17.1■□□□□ 0.33
MRPL55-229ENST00000483159 THRAP3Q9Y2W1 955 aaKnown RBP17.1■□□□□ 0.33
MRPL55-229ENST00000483159 COL5A2P05997 1499 aaPredicted RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms